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Recent advancements in CRISPR/Cas technology for accelerated crop improvement
Main conclusion Precise genome engineering approaches could be perceived as a second paradigm for targeted trait improvement in crop plants, with the potential to overcome the constraints imposed by conventional CRISPR/Cas technology . The likelihood of reduced agricultural production due to highly...
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Published in: | Planta 2022-05, Vol.255 (5), p.109-109, Article 109 |
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creator | Das, Debajit Singha, Dhanawantari L. Paswan, Ricky Raj Chowdhury, Naimisha Sharma, Monica Reddy, Palakolanu Sudhakar Chikkaputtaiah, Channakeshavaiah |
description | Main conclusion
Precise genome engineering approaches could be perceived as a second paradigm for targeted trait improvement in crop plants, with the potential to overcome the constraints imposed by conventional CRISPR/Cas technology
.
The likelihood of reduced agricultural production due to highly turbulent climatic conditions increases as the global population expands. The second paradigm of stress-resilient crops with enhanced tolerance and increased productivity against various stresses is paramount to support global production and consumption equilibrium. Although traditional breeding approaches have substantially increased crop production and yield, effective strategies are anticipated to restore crop productivity even further in meeting the world’s increasing food demands. CRISPR/Cas, which originated in prokaryotes, has surfaced as a coveted genome editing tool in recent decades, reshaping plant molecular biology in unprecedented ways and paving the way for engineering stress-tolerant crops. CRISPR/Cas is distinguished by its efficiency, high target specificity, and modularity, enables precise genetic modification of crop plants, allowing for the creation of allelic variations in the germplasm and the development of novel and more productive agricultural practices. Additionally, a slew of advanced biotechnologies premised on the CRISPR/Cas methodologies have augmented fundamental research and plant synthetic biology toolkits. Here, we describe gene editing tools, including CRISPR/Cas and its imitative tools, such as base and prime editing, multiplex genome editing, chromosome engineering followed by their implications in crop genetic improvement. Further, we comprehensively discuss the latest developments of CRISPR/Cas technology including CRISPR-mediated gene drive, tissue-specific genome editing, dCas9 mediated epigenetic modification and programmed self-elimination of transgenes in plants. Finally, we highlight the applicability and scope of advanced CRISPR-based techniques in crop genetic improvement. |
doi_str_mv | 10.1007/s00425-022-03894-3 |
format | article |
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Precise genome engineering approaches could be perceived as a second paradigm for targeted trait improvement in crop plants, with the potential to overcome the constraints imposed by conventional CRISPR/Cas technology
.
The likelihood of reduced agricultural production due to highly turbulent climatic conditions increases as the global population expands. The second paradigm of stress-resilient crops with enhanced tolerance and increased productivity against various stresses is paramount to support global production and consumption equilibrium. Although traditional breeding approaches have substantially increased crop production and yield, effective strategies are anticipated to restore crop productivity even further in meeting the world’s increasing food demands. CRISPR/Cas, which originated in prokaryotes, has surfaced as a coveted genome editing tool in recent decades, reshaping plant molecular biology in unprecedented ways and paving the way for engineering stress-tolerant crops. CRISPR/Cas is distinguished by its efficiency, high target specificity, and modularity, enables precise genetic modification of crop plants, allowing for the creation of allelic variations in the germplasm and the development of novel and more productive agricultural practices. Additionally, a slew of advanced biotechnologies premised on the CRISPR/Cas methodologies have augmented fundamental research and plant synthetic biology toolkits. Here, we describe gene editing tools, including CRISPR/Cas and its imitative tools, such as base and prime editing, multiplex genome editing, chromosome engineering followed by their implications in crop genetic improvement. Further, we comprehensively discuss the latest developments of CRISPR/Cas technology including CRISPR-mediated gene drive, tissue-specific genome editing, dCas9 mediated epigenetic modification and programmed self-elimination of transgenes in plants. Finally, we highlight the applicability and scope of advanced CRISPR-based techniques in crop genetic improvement.</description><identifier>ISSN: 0032-0935</identifier><identifier>EISSN: 1432-2048</identifier><identifier>DOI: 10.1007/s00425-022-03894-3</identifier><identifier>PMID: 35460444</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer Berlin Heidelberg</publisher><subject>Agricultural practices ; Agricultural production ; Agriculture ; Biology ; Biomedical and Life Sciences ; Biotechnology ; Chromosomes ; Climatic conditions ; CRISPR ; CRISPR-Cas Systems - genetics ; CRISPR/Cas-mediated gene editing to ensure product quality and plant performance ; Crop improvement ; Crop production ; Crop resilience ; Crops ; Crops, Agricultural - genetics ; Ecology ; Epigenetics ; Forestry ; Genetic improvement ; Genetic modification ; Genome editing ; Genome, Plant - genetics ; Genomes ; Germplasm ; Life Sciences ; Modularity ; Molecular biology ; Plant breeding ; Plant Breeding - methods ; Plant Sciences ; Plants, Genetically Modified - genetics ; Productivity ; Prokaryotes ; Review ; Technology ; Toolkits ; Transgenes ; Transgenic plants</subject><ispartof>Planta, 2022-05, Vol.255 (5), p.109-109, Article 109</ispartof><rights>The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature 2022</rights><rights>2022. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.</rights><rights>The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature 2022.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c349t-bf4c30fc68d60b4e843d74ecc57650cce010cf65e03b8bc40e8d266f9e9fa4403</citedby><cites>FETCH-LOGICAL-c349t-bf4c30fc68d60b4e843d74ecc57650cce010cf65e03b8bc40e8d266f9e9fa4403</cites><orcidid>0000-0001-6204-3733 ; 0000-0001-5981-2933 ; 0000-0002-5043-0776 ; 0000-0001-7793-861X ; 0000-0001-9881-0455 ; 0000-0001-7329-8643 ; 0000-0002-5341-187X</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/35460444$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Das, Debajit</creatorcontrib><creatorcontrib>Singha, Dhanawantari L.</creatorcontrib><creatorcontrib>Paswan, Ricky Raj</creatorcontrib><creatorcontrib>Chowdhury, Naimisha</creatorcontrib><creatorcontrib>Sharma, Monica</creatorcontrib><creatorcontrib>Reddy, Palakolanu Sudhakar</creatorcontrib><creatorcontrib>Chikkaputtaiah, Channakeshavaiah</creatorcontrib><title>Recent advancements in CRISPR/Cas technology for accelerated crop improvement</title><title>Planta</title><addtitle>Planta</addtitle><addtitle>Planta</addtitle><description>Main conclusion
Precise genome engineering approaches could be perceived as a second paradigm for targeted trait improvement in crop plants, with the potential to overcome the constraints imposed by conventional CRISPR/Cas technology
.
The likelihood of reduced agricultural production due to highly turbulent climatic conditions increases as the global population expands. The second paradigm of stress-resilient crops with enhanced tolerance and increased productivity against various stresses is paramount to support global production and consumption equilibrium. Although traditional breeding approaches have substantially increased crop production and yield, effective strategies are anticipated to restore crop productivity even further in meeting the world’s increasing food demands. CRISPR/Cas, which originated in prokaryotes, has surfaced as a coveted genome editing tool in recent decades, reshaping plant molecular biology in unprecedented ways and paving the way for engineering stress-tolerant crops. CRISPR/Cas is distinguished by its efficiency, high target specificity, and modularity, enables precise genetic modification of crop plants, allowing for the creation of allelic variations in the germplasm and the development of novel and more productive agricultural practices. Additionally, a slew of advanced biotechnologies premised on the CRISPR/Cas methodologies have augmented fundamental research and plant synthetic biology toolkits. Here, we describe gene editing tools, including CRISPR/Cas and its imitative tools, such as base and prime editing, multiplex genome editing, chromosome engineering followed by their implications in crop genetic improvement. Further, we comprehensively discuss the latest developments of CRISPR/Cas technology including CRISPR-mediated gene drive, tissue-specific genome editing, dCas9 mediated epigenetic modification and programmed self-elimination of transgenes in plants. Finally, we highlight the applicability and scope of advanced CRISPR-based techniques in crop genetic improvement.</description><subject>Agricultural practices</subject><subject>Agricultural production</subject><subject>Agriculture</subject><subject>Biology</subject><subject>Biomedical and Life Sciences</subject><subject>Biotechnology</subject><subject>Chromosomes</subject><subject>Climatic conditions</subject><subject>CRISPR</subject><subject>CRISPR-Cas Systems - genetics</subject><subject>CRISPR/Cas-mediated gene editing to ensure product quality and plant performance</subject><subject>Crop improvement</subject><subject>Crop production</subject><subject>Crop resilience</subject><subject>Crops</subject><subject>Crops, Agricultural - genetics</subject><subject>Ecology</subject><subject>Epigenetics</subject><subject>Forestry</subject><subject>Genetic improvement</subject><subject>Genetic modification</subject><subject>Genome editing</subject><subject>Genome, Plant - genetics</subject><subject>Genomes</subject><subject>Germplasm</subject><subject>Life Sciences</subject><subject>Modularity</subject><subject>Molecular biology</subject><subject>Plant breeding</subject><subject>Plant Breeding - methods</subject><subject>Plant Sciences</subject><subject>Plants, Genetically Modified - genetics</subject><subject>Productivity</subject><subject>Prokaryotes</subject><subject>Review</subject><subject>Technology</subject><subject>Toolkits</subject><subject>Transgenes</subject><subject>Transgenic plants</subject><issn>0032-0935</issn><issn>1432-2048</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><recordid>eNp9kE9Lw0AQxRdRbK1-AQ8S8OIlOtmdbJKjFP8UKkrV87LZTGpLk9TdtNBv77apCh48zcD83puZx9h5BNcRQHLjAJDHIXAegkgzDMUB60coeMgB00PWB_A9ZCLusRPn5gB-mCTHrCdilICIffY0IUN1G-hirWtDle9dMKuD4WT0-jK5GWoXtGQ-6mbRTDdB2dhAG0MLsrqlIjC2WQazammb9U56yo5KvXB0tq8D9n5_9zZ8DMfPD6Ph7Tg0ArM2zEs0Akoj00JCjpSiKBIkY-JExuD9IQJTyphA5GluECgtuJRlRlmpEUEM2FXn6zd_rsi1qpo5f9ZC19SsnOIyRp4lHXr5B503K1v767aUkCJDFJ7iHeU_cs5SqZZ2Vmm7URGobdiqC1v5sNUubLUVXeytV3lFxY_kO10PiA5wflRPyf7u_sf2Cxw_iUg</recordid><startdate>20220501</startdate><enddate>20220501</enddate><creator>Das, Debajit</creator><creator>Singha, Dhanawantari L.</creator><creator>Paswan, Ricky Raj</creator><creator>Chowdhury, Naimisha</creator><creator>Sharma, Monica</creator><creator>Reddy, Palakolanu Sudhakar</creator><creator>Chikkaputtaiah, Channakeshavaiah</creator><general>Springer Berlin Heidelberg</general><general>Springer Nature B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QP</scope><scope>7QR</scope><scope>7TM</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0K</scope><scope>M0S</scope><scope>M1P</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>RC3</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0001-6204-3733</orcidid><orcidid>https://orcid.org/0000-0001-5981-2933</orcidid><orcidid>https://orcid.org/0000-0002-5043-0776</orcidid><orcidid>https://orcid.org/0000-0001-7793-861X</orcidid><orcidid>https://orcid.org/0000-0001-9881-0455</orcidid><orcidid>https://orcid.org/0000-0001-7329-8643</orcidid><orcidid>https://orcid.org/0000-0002-5341-187X</orcidid></search><sort><creationdate>20220501</creationdate><title>Recent advancements in CRISPR/Cas technology for accelerated crop improvement</title><author>Das, Debajit ; Singha, Dhanawantari L. ; Paswan, Ricky Raj ; Chowdhury, Naimisha ; Sharma, Monica ; Reddy, Palakolanu Sudhakar ; Chikkaputtaiah, Channakeshavaiah</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c349t-bf4c30fc68d60b4e843d74ecc57650cce010cf65e03b8bc40e8d266f9e9fa4403</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2022</creationdate><topic>Agricultural practices</topic><topic>Agricultural production</topic><topic>Agriculture</topic><topic>Biology</topic><topic>Biomedical and Life Sciences</topic><topic>Biotechnology</topic><topic>Chromosomes</topic><topic>Climatic conditions</topic><topic>CRISPR</topic><topic>CRISPR-Cas Systems - genetics</topic><topic>CRISPR/Cas-mediated gene editing to ensure product quality and plant performance</topic><topic>Crop improvement</topic><topic>Crop production</topic><topic>Crop resilience</topic><topic>Crops</topic><topic>Crops, Agricultural - genetics</topic><topic>Ecology</topic><topic>Epigenetics</topic><topic>Forestry</topic><topic>Genetic improvement</topic><topic>Genetic modification</topic><topic>Genome editing</topic><topic>Genome, Plant - genetics</topic><topic>Genomes</topic><topic>Germplasm</topic><topic>Life Sciences</topic><topic>Modularity</topic><topic>Molecular biology</topic><topic>Plant breeding</topic><topic>Plant Breeding - methods</topic><topic>Plant Sciences</topic><topic>Plants, Genetically Modified - genetics</topic><topic>Productivity</topic><topic>Prokaryotes</topic><topic>Review</topic><topic>Technology</topic><topic>Toolkits</topic><topic>Transgenes</topic><topic>Transgenic plants</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Das, Debajit</creatorcontrib><creatorcontrib>Singha, Dhanawantari L.</creatorcontrib><creatorcontrib>Paswan, Ricky Raj</creatorcontrib><creatorcontrib>Chowdhury, Naimisha</creatorcontrib><creatorcontrib>Sharma, Monica</creatorcontrib><creatorcontrib>Reddy, Palakolanu Sudhakar</creatorcontrib><creatorcontrib>Chikkaputtaiah, Channakeshavaiah</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Calcium & Calcified Tissue Abstracts</collection><collection>Chemoreception Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Agricultural Science Collection</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>AUTh Library subscriptions: ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Agriculture Science Database</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>PML(ProQuest Medical Library)</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Planta</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Das, Debajit</au><au>Singha, Dhanawantari L.</au><au>Paswan, Ricky Raj</au><au>Chowdhury, Naimisha</au><au>Sharma, Monica</au><au>Reddy, Palakolanu Sudhakar</au><au>Chikkaputtaiah, Channakeshavaiah</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Recent advancements in CRISPR/Cas technology for accelerated crop improvement</atitle><jtitle>Planta</jtitle><stitle>Planta</stitle><addtitle>Planta</addtitle><date>2022-05-01</date><risdate>2022</risdate><volume>255</volume><issue>5</issue><spage>109</spage><epage>109</epage><pages>109-109</pages><artnum>109</artnum><issn>0032-0935</issn><eissn>1432-2048</eissn><abstract>Main conclusion
Precise genome engineering approaches could be perceived as a second paradigm for targeted trait improvement in crop plants, with the potential to overcome the constraints imposed by conventional CRISPR/Cas technology
.
The likelihood of reduced agricultural production due to highly turbulent climatic conditions increases as the global population expands. The second paradigm of stress-resilient crops with enhanced tolerance and increased productivity against various stresses is paramount to support global production and consumption equilibrium. Although traditional breeding approaches have substantially increased crop production and yield, effective strategies are anticipated to restore crop productivity even further in meeting the world’s increasing food demands. CRISPR/Cas, which originated in prokaryotes, has surfaced as a coveted genome editing tool in recent decades, reshaping plant molecular biology in unprecedented ways and paving the way for engineering stress-tolerant crops. CRISPR/Cas is distinguished by its efficiency, high target specificity, and modularity, enables precise genetic modification of crop plants, allowing for the creation of allelic variations in the germplasm and the development of novel and more productive agricultural practices. Additionally, a slew of advanced biotechnologies premised on the CRISPR/Cas methodologies have augmented fundamental research and plant synthetic biology toolkits. Here, we describe gene editing tools, including CRISPR/Cas and its imitative tools, such as base and prime editing, multiplex genome editing, chromosome engineering followed by their implications in crop genetic improvement. Further, we comprehensively discuss the latest developments of CRISPR/Cas technology including CRISPR-mediated gene drive, tissue-specific genome editing, dCas9 mediated epigenetic modification and programmed self-elimination of transgenes in plants. Finally, we highlight the applicability and scope of advanced CRISPR-based techniques in crop genetic improvement.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer Berlin Heidelberg</pub><pmid>35460444</pmid><doi>10.1007/s00425-022-03894-3</doi><tpages>1</tpages><orcidid>https://orcid.org/0000-0001-6204-3733</orcidid><orcidid>https://orcid.org/0000-0001-5981-2933</orcidid><orcidid>https://orcid.org/0000-0002-5043-0776</orcidid><orcidid>https://orcid.org/0000-0001-7793-861X</orcidid><orcidid>https://orcid.org/0000-0001-9881-0455</orcidid><orcidid>https://orcid.org/0000-0001-7329-8643</orcidid><orcidid>https://orcid.org/0000-0002-5341-187X</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Agricultural practices Agricultural production Agriculture Biology Biomedical and Life Sciences Biotechnology Chromosomes Climatic conditions CRISPR CRISPR-Cas Systems - genetics CRISPR/Cas-mediated gene editing to ensure product quality and plant performance Crop improvement Crop production Crop resilience Crops Crops, Agricultural - genetics Ecology Epigenetics Forestry Genetic improvement Genetic modification Genome editing Genome, Plant - genetics Genomes Germplasm Life Sciences Modularity Molecular biology Plant breeding Plant Breeding - methods Plant Sciences Plants, Genetically Modified - genetics Productivity Prokaryotes Review Technology Toolkits Transgenes Transgenic plants |
title | Recent advancements in CRISPR/Cas technology for accelerated crop improvement |
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