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Identification of SNPs and expression patterns of ALB, AHSG and GC genes and their association with growth traits in Hu sheep
•The SNP of ALB was significantly associated with ADG.•The SNP of AHSG was significantly associated with ADG and FCR.•The SNP of GC was significantly associated with BW, BH and BL.•ALB, AHSG, and GC expression levels were significantly higher in H_BW group. Growth traits are economically important t...
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Published in: | Gene 2023-02, Vol.853, p.147100-147100, Article 147100 |
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creator | Zhao, Liming Wang, Weimin Wang, Xiaojuan Zhang, Deyin Li, Xiaolong Zhao, Yuan Zhang, Yukun Xu, Dan Cheng, Jiangbo Wang, Jianghui Li, Wenxin Lin, Changchun Wu, Weiwei Zhang, Xiaoxue Zheng, Wenxin |
description | •The SNP of ALB was significantly associated with ADG.•The SNP of AHSG was significantly associated with ADG and FCR.•The SNP of GC was significantly associated with BW, BH and BL.•ALB, AHSG, and GC expression levels were significantly higher in H_BW group.
Growth traits are economically important traits in sheep breeding. This study was conducted to evaluate the polymorphisms of ALB, AHSG and GC genes and their association with growth traits in Hu sheep. We measured and recorded the body weight (BW), body height (BH), body length (BL) and feed conversion ratio (FCR) of 1418 male Hu sheep raised in the same environment from 80 to 180 days of age. The total of four SNPs in the ALB, AHSG and GC genes were identified by direct sequencing technology. The results of association analysis showed that two loci (g.8699 A>T and g.13458 T>C) of ALB gene significantly affect average daily gain (ADG; P C in AHSG gene were significantly associated with ADG and FCR (P C and BW, BH and BL (P C, AHSG g.2454 T>C and GC g.19484 A>C loci are potential molecular markers for Hu sheep breeding. |
doi_str_mv | 10.1016/j.gene.2022.147100 |
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Growth traits are economically important traits in sheep breeding. This study was conducted to evaluate the polymorphisms of ALB, AHSG and GC genes and their association with growth traits in Hu sheep. We measured and recorded the body weight (BW), body height (BH), body length (BL) and feed conversion ratio (FCR) of 1418 male Hu sheep raised in the same environment from 80 to 180 days of age. The total of four SNPs in the ALB, AHSG and GC genes were identified by direct sequencing technology. The results of association analysis showed that two loci (g.8699 A>T and g.13458 T>C) of ALB gene significantly affect average daily gain (ADG; P < 0.05). The genotypes of SNP g.2454 T>C in AHSG gene were significantly associated with ADG and FCR (P < 0.05). There were significant associations between GC g.19484 A>C and BW, BH and BL (P < 0.05). The results of qRT-PCR showed that ALB, AHSG, and GC genes were extremely significantly higher in H_BW sheep compared with those in the L_BW sheep (P < 0.01). These results revealed that ALB-1 g.8699 A>T, ALB-2 g.13458 T>C, AHSG g.2454 T>C and GC g.19484 A>C loci are potential molecular markers for Hu sheep breeding.</description><identifier>ISSN: 0378-1119</identifier><identifier>EISSN: 1879-0038</identifier><identifier>DOI: 10.1016/j.gene.2022.147100</identifier><identifier>PMID: 36470483</identifier><language>eng</language><publisher>Netherlands: Elsevier B.V</publisher><subject>AHSG ; ALB ; Animals ; Association ; Body Weight - genetics ; Genes, Regulator ; Genotype ; Growth traits ; Hu sheep ; Male ; Phenotype ; Polymorphism, Single Nucleotide ; qRT-PCR ; Sheep - genetics ; SNP</subject><ispartof>Gene, 2023-02, Vol.853, p.147100-147100, Article 147100</ispartof><rights>2022 Elsevier B.V.</rights><rights>Copyright © 2022 Elsevier B.V. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c356t-f9d79a193482583055f5d282d0c27abdb0c372e7a459da0bd41d1b2b32530ff63</citedby><cites>FETCH-LOGICAL-c356t-f9d79a193482583055f5d282d0c27abdb0c372e7a459da0bd41d1b2b32530ff63</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/36470483$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Zhao, Liming</creatorcontrib><creatorcontrib>Wang, Weimin</creatorcontrib><creatorcontrib>Wang, Xiaojuan</creatorcontrib><creatorcontrib>Zhang, Deyin</creatorcontrib><creatorcontrib>Li, Xiaolong</creatorcontrib><creatorcontrib>Zhao, Yuan</creatorcontrib><creatorcontrib>Zhang, Yukun</creatorcontrib><creatorcontrib>Xu, Dan</creatorcontrib><creatorcontrib>Cheng, Jiangbo</creatorcontrib><creatorcontrib>Wang, Jianghui</creatorcontrib><creatorcontrib>Li, Wenxin</creatorcontrib><creatorcontrib>Lin, Changchun</creatorcontrib><creatorcontrib>Wu, Weiwei</creatorcontrib><creatorcontrib>Zhang, Xiaoxue</creatorcontrib><creatorcontrib>Zheng, Wenxin</creatorcontrib><title>Identification of SNPs and expression patterns of ALB, AHSG and GC genes and their association with growth traits in Hu sheep</title><title>Gene</title><addtitle>Gene</addtitle><description>•The SNP of ALB was significantly associated with ADG.•The SNP of AHSG was significantly associated with ADG and FCR.•The SNP of GC was significantly associated with BW, BH and BL.•ALB, AHSG, and GC expression levels were significantly higher in H_BW group.
Growth traits are economically important traits in sheep breeding. This study was conducted to evaluate the polymorphisms of ALB, AHSG and GC genes and their association with growth traits in Hu sheep. We measured and recorded the body weight (BW), body height (BH), body length (BL) and feed conversion ratio (FCR) of 1418 male Hu sheep raised in the same environment from 80 to 180 days of age. The total of four SNPs in the ALB, AHSG and GC genes were identified by direct sequencing technology. The results of association analysis showed that two loci (g.8699 A>T and g.13458 T>C) of ALB gene significantly affect average daily gain (ADG; P < 0.05). The genotypes of SNP g.2454 T>C in AHSG gene were significantly associated with ADG and FCR (P < 0.05). There were significant associations between GC g.19484 A>C and BW, BH and BL (P < 0.05). The results of qRT-PCR showed that ALB, AHSG, and GC genes were extremely significantly higher in H_BW sheep compared with those in the L_BW sheep (P < 0.01). These results revealed that ALB-1 g.8699 A>T, ALB-2 g.13458 T>C, AHSG g.2454 T>C and GC g.19484 A>C loci are potential molecular markers for Hu sheep breeding.</description><subject>AHSG</subject><subject>ALB</subject><subject>Animals</subject><subject>Association</subject><subject>Body Weight - genetics</subject><subject>Genes, Regulator</subject><subject>Genotype</subject><subject>Growth traits</subject><subject>Hu sheep</subject><subject>Male</subject><subject>Phenotype</subject><subject>Polymorphism, Single Nucleotide</subject><subject>qRT-PCR</subject><subject>Sheep - genetics</subject><subject>SNP</subject><issn>0378-1119</issn><issn>1879-0038</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><recordid>eNp9kM1u2zAQhImiQeKmeYEeCh57qBz-SKYE9OIYqW3ASAokORMUuYpp2JLKperkkHevVCU5di8LLL8ZcIaQL5xNOeOzy930EWqYCibElKeKM_aBTHiuioQxmX8kEyZVnnDOizPyCXHH-skycUrO5CxVLM3lhLysHdTRV96a6JuaNhW9u_mF1NSOwlMbAHE4tyZGCDUO7_PN1Xc6X90t_0HLBR1-MSriFnygBrGxfvQ7-rilj6E59isG4yNSX9NVR3EL0H4mJ5XZI1y87nPy8PP6frFKNrfL9WK-SazMZjGpCqcKwwuZ5iLLZR-iypzIhWNWKFO6klmpBCiTZoUzrHQpd7wUpRSZZFU1k-fk2-jbhuZ3Bxj1waOF_d7U0HSohUqVULmUrEfFiNrQIAaodBv8wYRnzZkeatc7PQTWQ-16rL0XfX3178oDuHfJW8898GMEoE_5x0PQaD3UFpwPYKN2jf-f_18Zy5K_</recordid><startdate>20230215</startdate><enddate>20230215</enddate><creator>Zhao, Liming</creator><creator>Wang, Weimin</creator><creator>Wang, Xiaojuan</creator><creator>Zhang, Deyin</creator><creator>Li, Xiaolong</creator><creator>Zhao, Yuan</creator><creator>Zhang, Yukun</creator><creator>Xu, Dan</creator><creator>Cheng, Jiangbo</creator><creator>Wang, Jianghui</creator><creator>Li, Wenxin</creator><creator>Lin, Changchun</creator><creator>Wu, Weiwei</creator><creator>Zhang, Xiaoxue</creator><creator>Zheng, Wenxin</creator><general>Elsevier B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20230215</creationdate><title>Identification of SNPs and expression patterns of ALB, AHSG and GC genes and their association with growth traits in Hu sheep</title><author>Zhao, Liming ; Wang, Weimin ; Wang, Xiaojuan ; Zhang, Deyin ; Li, Xiaolong ; Zhao, Yuan ; Zhang, Yukun ; Xu, Dan ; Cheng, Jiangbo ; Wang, Jianghui ; Li, Wenxin ; Lin, Changchun ; Wu, Weiwei ; Zhang, Xiaoxue ; Zheng, Wenxin</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c356t-f9d79a193482583055f5d282d0c27abdb0c372e7a459da0bd41d1b2b32530ff63</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>AHSG</topic><topic>ALB</topic><topic>Animals</topic><topic>Association</topic><topic>Body Weight - genetics</topic><topic>Genes, Regulator</topic><topic>Genotype</topic><topic>Growth traits</topic><topic>Hu sheep</topic><topic>Male</topic><topic>Phenotype</topic><topic>Polymorphism, Single Nucleotide</topic><topic>qRT-PCR</topic><topic>Sheep - genetics</topic><topic>SNP</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Zhao, Liming</creatorcontrib><creatorcontrib>Wang, Weimin</creatorcontrib><creatorcontrib>Wang, Xiaojuan</creatorcontrib><creatorcontrib>Zhang, Deyin</creatorcontrib><creatorcontrib>Li, Xiaolong</creatorcontrib><creatorcontrib>Zhao, Yuan</creatorcontrib><creatorcontrib>Zhang, Yukun</creatorcontrib><creatorcontrib>Xu, Dan</creatorcontrib><creatorcontrib>Cheng, Jiangbo</creatorcontrib><creatorcontrib>Wang, Jianghui</creatorcontrib><creatorcontrib>Li, Wenxin</creatorcontrib><creatorcontrib>Lin, Changchun</creatorcontrib><creatorcontrib>Wu, Weiwei</creatorcontrib><creatorcontrib>Zhang, Xiaoxue</creatorcontrib><creatorcontrib>Zheng, Wenxin</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Gene</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Zhao, Liming</au><au>Wang, Weimin</au><au>Wang, Xiaojuan</au><au>Zhang, Deyin</au><au>Li, Xiaolong</au><au>Zhao, Yuan</au><au>Zhang, Yukun</au><au>Xu, Dan</au><au>Cheng, Jiangbo</au><au>Wang, Jianghui</au><au>Li, Wenxin</au><au>Lin, Changchun</au><au>Wu, Weiwei</au><au>Zhang, Xiaoxue</au><au>Zheng, Wenxin</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Identification of SNPs and expression patterns of ALB, AHSG and GC genes and their association with growth traits in Hu sheep</atitle><jtitle>Gene</jtitle><addtitle>Gene</addtitle><date>2023-02-15</date><risdate>2023</risdate><volume>853</volume><spage>147100</spage><epage>147100</epage><pages>147100-147100</pages><artnum>147100</artnum><issn>0378-1119</issn><eissn>1879-0038</eissn><abstract>•The SNP of ALB was significantly associated with ADG.•The SNP of AHSG was significantly associated with ADG and FCR.•The SNP of GC was significantly associated with BW, BH and BL.•ALB, AHSG, and GC expression levels were significantly higher in H_BW group.
Growth traits are economically important traits in sheep breeding. This study was conducted to evaluate the polymorphisms of ALB, AHSG and GC genes and their association with growth traits in Hu sheep. We measured and recorded the body weight (BW), body height (BH), body length (BL) and feed conversion ratio (FCR) of 1418 male Hu sheep raised in the same environment from 80 to 180 days of age. The total of four SNPs in the ALB, AHSG and GC genes were identified by direct sequencing technology. The results of association analysis showed that two loci (g.8699 A>T and g.13458 T>C) of ALB gene significantly affect average daily gain (ADG; P < 0.05). The genotypes of SNP g.2454 T>C in AHSG gene were significantly associated with ADG and FCR (P < 0.05). There were significant associations between GC g.19484 A>C and BW, BH and BL (P < 0.05). The results of qRT-PCR showed that ALB, AHSG, and GC genes were extremely significantly higher in H_BW sheep compared with those in the L_BW sheep (P < 0.01). These results revealed that ALB-1 g.8699 A>T, ALB-2 g.13458 T>C, AHSG g.2454 T>C and GC g.19484 A>C loci are potential molecular markers for Hu sheep breeding.</abstract><cop>Netherlands</cop><pub>Elsevier B.V</pub><pmid>36470483</pmid><doi>10.1016/j.gene.2022.147100</doi><tpages>1</tpages></addata></record> |
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subjects | AHSG ALB Animals Association Body Weight - genetics Genes, Regulator Genotype Growth traits Hu sheep Male Phenotype Polymorphism, Single Nucleotide qRT-PCR Sheep - genetics SNP |
title | Identification of SNPs and expression patterns of ALB, AHSG and GC genes and their association with growth traits in Hu sheep |
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