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Map‐based B0 shimming for single voxel brain spectroscopy at 7T
While B0 shimming is an important requirement for in vivo brain spectroscopy, for single voxel spectroscopy (SVS), the role for advanced shim methods has been questioned. Specifically, with the small spatial dimensions of the voxel, the extent to which inhomogeneities higher than second order exist...
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Published in: | NMR in biomedicine 2023-12, Vol.36 (12), p.e5021-e5021 |
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description | While B0 shimming is an important requirement for in vivo brain spectroscopy, for single voxel spectroscopy (SVS), the role for advanced shim methods has been questioned. Specifically, with the small spatial dimensions of the voxel, the extent to which inhomogeneities higher than second order exist and the ability of higher order shims to correct them is controversial. To assess this, we acquired SVS from two loci of neurophysiological interest, the rostral prefrontal cortex (rPFC; 8 cc) and hippocampus (Hc; 9 cc). The rPFC voxel was placed using SUsceptibility Managed Optimization (SUMO) and an initial B0 map that covers the entire cerebrum to cerebellum. In each location, we compared map‐based shimming (Bolero) with projection‐based shimming (FAST(EST)MAP). We also compared vendor‐provided spherical harmonic first‐ and second‐order shims with additional third‐ and fourth‐order shim hardware. The 7T SVS acquisition used stimulated echo acquisition mode (STEAM) TR/TM/TE of 6 s/20 ms/8 ms, a tissue water acquisition for concentration reference, and LCModel for spectral analysis. In the rPFC (n = 7 subjects), Bolero shimming with first‐ and second‐order shims reduced the residual inhomogeneity σB0 from 9.8 ± 4.5 Hz with FAST(EST)MAP to 6.5 ± 2.0 Hz. The addition of third‐ and fourth‐order shims further reduced σB0 to 4.0 ± 0.8 Hz. In the Hc (n = 7 subjects), FAST(EST)MAP, Bolero with first‐ and second‐order shims, and Bolero with first‐ to fourth‐order shims achieved σB0 values of 8.6 ± 1.9, 5.6 ± 1.0, and 4.6 ± 0.9 Hz, respectively. The spectral linewidth, ΔvσB0, was estimated with a Voigt lineshape using σB0 and T2 = 130 ms. ΔvσB0 significantly correlated with the Cramer–Rao lower bounds and concentrations of several metabolites, including glutamate and glutamine in the rPFC. In both loci, if the B0 distribution is well described by a Gaussian model, the variance of the metabolite concentrations is reduced, consistent with the LCModel fit based on a unimodal lineshape. Overall, the use of the high order and map‐based B0 shim methods improved the accuracy and consistency of spectroscopic data. |
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Specifically, with the small spatial dimensions of the voxel, the extent to which inhomogeneities higher than second order exist and the ability of higher order shims to correct them is controversial. To assess this, we acquired SVS from two loci of neurophysiological interest, the rostral prefrontal cortex (rPFC; 8 cc) and hippocampus (Hc; 9 cc). The rPFC voxel was placed using SUsceptibility Managed Optimization (SUMO) and an initial B0 map that covers the entire cerebrum to cerebellum. In each location, we compared map‐based shimming (Bolero) with projection‐based shimming (FAST(EST)MAP). We also compared vendor‐provided spherical harmonic first‐ and second‐order shims with additional third‐ and fourth‐order shim hardware. The 7T SVS acquisition used stimulated echo acquisition mode (STEAM) TR/TM/TE of 6 s/20 ms/8 ms, a tissue water acquisition for concentration reference, and LCModel for spectral analysis. In the rPFC (n = 7 subjects), Bolero shimming with first‐ and second‐order shims reduced the residual inhomogeneity σB0 from 9.8 ± 4.5 Hz with FAST(EST)MAP to 6.5 ± 2.0 Hz. The addition of third‐ and fourth‐order shims further reduced σB0 to 4.0 ± 0.8 Hz. In the Hc (n = 7 subjects), FAST(EST)MAP, Bolero with first‐ and second‐order shims, and Bolero with first‐ to fourth‐order shims achieved σB0 values of 8.6 ± 1.9, 5.6 ± 1.0, and 4.6 ± 0.9 Hz, respectively. The spectral linewidth, ΔvσB0, was estimated with a Voigt lineshape using σB0 and T2 = 130 ms. ΔvσB0 significantly correlated with the Cramer–Rao lower bounds and concentrations of several metabolites, including glutamate and glutamine in the rPFC. In both loci, if the B0 distribution is well described by a Gaussian model, the variance of the metabolite concentrations is reduced, consistent with the LCModel fit based on a unimodal lineshape. Overall, the use of the high order and map‐based B0 shim methods improved the accuracy and consistency of spectroscopic data.</description><identifier>ISSN: 0952-3480</identifier><identifier>EISSN: 1099-1492</identifier><identifier>DOI: 10.1002/nbm.5021</identifier><language>eng</language><publisher>Oxford: Wiley Subscription Services, Inc</publisher><subject>Biological products ; Brain ; Cerebellum ; Cerebrum ; Glutamine ; Inhomogeneity ; Lower bounds ; Metabolites ; Optimization ; Prefrontal cortex ; Spectral analysis ; Spectroscopy ; Spectrum analysis ; Spherical harmonics</subject><ispartof>NMR in biomedicine, 2023-12, Vol.36 (12), p.e5021-e5021</ispartof><rights>2023. This article is published under http://creativecommons.org/licenses/by-nc-nd/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids></links><search><creatorcontrib>Pan, Jullie W</creatorcontrib><creatorcontrib>Terpstra, Melissa J</creatorcontrib><creatorcontrib>Chan‐Hong Moon</creatorcontrib><creatorcontrib>Hetherington, Hoby P</creatorcontrib><title>Map‐based B0 shimming for single voxel brain spectroscopy at 7T</title><title>NMR in biomedicine</title><description>While B0 shimming is an important requirement for in vivo brain spectroscopy, for single voxel spectroscopy (SVS), the role for advanced shim methods has been questioned. Specifically, with the small spatial dimensions of the voxel, the extent to which inhomogeneities higher than second order exist and the ability of higher order shims to correct them is controversial. To assess this, we acquired SVS from two loci of neurophysiological interest, the rostral prefrontal cortex (rPFC; 8 cc) and hippocampus (Hc; 9 cc). The rPFC voxel was placed using SUsceptibility Managed Optimization (SUMO) and an initial B0 map that covers the entire cerebrum to cerebellum. In each location, we compared map‐based shimming (Bolero) with projection‐based shimming (FAST(EST)MAP). We also compared vendor‐provided spherical harmonic first‐ and second‐order shims with additional third‐ and fourth‐order shim hardware. The 7T SVS acquisition used stimulated echo acquisition mode (STEAM) TR/TM/TE of 6 s/20 ms/8 ms, a tissue water acquisition for concentration reference, and LCModel for spectral analysis. In the rPFC (n = 7 subjects), Bolero shimming with first‐ and second‐order shims reduced the residual inhomogeneity σB0 from 9.8 ± 4.5 Hz with FAST(EST)MAP to 6.5 ± 2.0 Hz. The addition of third‐ and fourth‐order shims further reduced σB0 to 4.0 ± 0.8 Hz. In the Hc (n = 7 subjects), FAST(EST)MAP, Bolero with first‐ and second‐order shims, and Bolero with first‐ to fourth‐order shims achieved σB0 values of 8.6 ± 1.9, 5.6 ± 1.0, and 4.6 ± 0.9 Hz, respectively. The spectral linewidth, ΔvσB0, was estimated with a Voigt lineshape using σB0 and T2 = 130 ms. ΔvσB0 significantly correlated with the Cramer–Rao lower bounds and concentrations of several metabolites, including glutamate and glutamine in the rPFC. In both loci, if the B0 distribution is well described by a Gaussian model, the variance of the metabolite concentrations is reduced, consistent with the LCModel fit based on a unimodal lineshape. Overall, the use of the high order and map‐based B0 shim methods improved the accuracy and consistency of spectroscopic data.</description><subject>Biological products</subject><subject>Brain</subject><subject>Cerebellum</subject><subject>Cerebrum</subject><subject>Glutamine</subject><subject>Inhomogeneity</subject><subject>Lower bounds</subject><subject>Metabolites</subject><subject>Optimization</subject><subject>Prefrontal cortex</subject><subject>Spectral analysis</subject><subject>Spectroscopy</subject><subject>Spectrum analysis</subject><subject>Spherical harmonics</subject><issn>0952-3480</issn><issn>1099-1492</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><recordid>eNpdjrFOwzAURS0EEqUg8QmWWFhS3rNjxx5LRQGpiKXM1Uv6AqmSOMQpgo1P4Bv5EiLBxHTvcHTuFeIcYYYA6qrNm5kBhQdiguB9gqlXh2IC3qhEpw6OxUmMOwBwqVYTMX-g7vvzK6fIW3kNMr5UTVO1z7IMvYxjqVm-hXeuZd5T1crYcTH0IRah-5A0yGx9Ko5KqiOf_eVUPC1v1ou7ZPV4e7-Yr5JOGRgS49NCp1zSOMvOgDZbtARau8JRlmdgkInYWTIpZ9ayV4hoSqaMjEPWU3H56-368LrnOGyaKhZc19Ry2MeNckZZjd66Eb34h-7Cvm_HdyPlLGowSukfx3JX2Q</recordid><startdate>20231201</startdate><enddate>20231201</enddate><creator>Pan, Jullie W</creator><creator>Terpstra, Melissa J</creator><creator>Chan‐Hong Moon</creator><creator>Hetherington, Hoby P</creator><general>Wiley Subscription Services, Inc</general><scope>7QO</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>7X8</scope></search><sort><creationdate>20231201</creationdate><title>Map‐based B0 shimming for single voxel brain spectroscopy at 7T</title><author>Pan, Jullie W ; Terpstra, Melissa J ; Chan‐Hong Moon ; Hetherington, Hoby P</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-p250t-594c34efa432e85035d16a0338c8a7b7051eaae86a54e766e921115fea7a581e3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>Biological products</topic><topic>Brain</topic><topic>Cerebellum</topic><topic>Cerebrum</topic><topic>Glutamine</topic><topic>Inhomogeneity</topic><topic>Lower bounds</topic><topic>Metabolites</topic><topic>Optimization</topic><topic>Prefrontal cortex</topic><topic>Spectral analysis</topic><topic>Spectroscopy</topic><topic>Spectrum analysis</topic><topic>Spherical harmonics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Pan, Jullie W</creatorcontrib><creatorcontrib>Terpstra, Melissa J</creatorcontrib><creatorcontrib>Chan‐Hong Moon</creatorcontrib><creatorcontrib>Hetherington, Hoby P</creatorcontrib><collection>Biotechnology Research Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>NMR in biomedicine</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Pan, Jullie W</au><au>Terpstra, Melissa J</au><au>Chan‐Hong Moon</au><au>Hetherington, Hoby P</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Map‐based B0 shimming for single voxel brain spectroscopy at 7T</atitle><jtitle>NMR in biomedicine</jtitle><date>2023-12-01</date><risdate>2023</risdate><volume>36</volume><issue>12</issue><spage>e5021</spage><epage>e5021</epage><pages>e5021-e5021</pages><issn>0952-3480</issn><eissn>1099-1492</eissn><abstract>While B0 shimming is an important requirement for in vivo brain spectroscopy, for single voxel spectroscopy (SVS), the role for advanced shim methods has been questioned. Specifically, with the small spatial dimensions of the voxel, the extent to which inhomogeneities higher than second order exist and the ability of higher order shims to correct them is controversial. To assess this, we acquired SVS from two loci of neurophysiological interest, the rostral prefrontal cortex (rPFC; 8 cc) and hippocampus (Hc; 9 cc). The rPFC voxel was placed using SUsceptibility Managed Optimization (SUMO) and an initial B0 map that covers the entire cerebrum to cerebellum. In each location, we compared map‐based shimming (Bolero) with projection‐based shimming (FAST(EST)MAP). We also compared vendor‐provided spherical harmonic first‐ and second‐order shims with additional third‐ and fourth‐order shim hardware. The 7T SVS acquisition used stimulated echo acquisition mode (STEAM) TR/TM/TE of 6 s/20 ms/8 ms, a tissue water acquisition for concentration reference, and LCModel for spectral analysis. In the rPFC (n = 7 subjects), Bolero shimming with first‐ and second‐order shims reduced the residual inhomogeneity σB0 from 9.8 ± 4.5 Hz with FAST(EST)MAP to 6.5 ± 2.0 Hz. The addition of third‐ and fourth‐order shims further reduced σB0 to 4.0 ± 0.8 Hz. In the Hc (n = 7 subjects), FAST(EST)MAP, Bolero with first‐ and second‐order shims, and Bolero with first‐ to fourth‐order shims achieved σB0 values of 8.6 ± 1.9, 5.6 ± 1.0, and 4.6 ± 0.9 Hz, respectively. The spectral linewidth, ΔvσB0, was estimated with a Voigt lineshape using σB0 and T2 = 130 ms. ΔvσB0 significantly correlated with the Cramer–Rao lower bounds and concentrations of several metabolites, including glutamate and glutamine in the rPFC. In both loci, if the B0 distribution is well described by a Gaussian model, the variance of the metabolite concentrations is reduced, consistent with the LCModel fit based on a unimodal lineshape. Overall, the use of the high order and map‐based B0 shim methods improved the accuracy and consistency of spectroscopic data.</abstract><cop>Oxford</cop><pub>Wiley Subscription Services, Inc</pub><doi>10.1002/nbm.5021</doi><oa>free_for_read</oa></addata></record> |
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subjects | Biological products Brain Cerebellum Cerebrum Glutamine Inhomogeneity Lower bounds Metabolites Optimization Prefrontal cortex Spectral analysis Spectroscopy Spectrum analysis Spherical harmonics |
title | Map‐based B0 shimming for single voxel brain spectroscopy at 7T |
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