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Can cardiolipins be used as a biomarker for arbuscular mycorrhizal fungi?
Specific biomarker molecules are increasingly being used for detection and quantification in plant and soil samples of arbuscular mycorrhizal (AM) fungi, an important and widespread microbial guild heavily implicated in transfers of nutrients and carbon between plants and soils and in the maintenanc...
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Published in: | Mycorrhiza 2023-11, Vol.33 (5-6), p.399-408 |
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creator | Řezanka, Tomáš Hršelová, Hana Kyselová, Lucie Jansa, Jan |
description | Specific biomarker molecules are increasingly being used for detection and quantification in plant and soil samples of arbuscular mycorrhizal (AM) fungi, an important and widespread microbial guild heavily implicated in transfers of nutrients and carbon between plants and soils and in the maintenance of soil physico-chemical properties. Yet, concerns have previously been raised as to the validity of a range of previously used approaches (e.g., microscopy, AM-specific fatty acids, sterols, glomalin-like molecules, ribosomal DNA sequences), justifying further research into novel biomarkers for AM fungal abundance and/or functioning. Here, we focused on complex polar lipids contained in pure biomass of
Rhizophagus irregularis
and in nonmycorrhizal and mycorrhizal roots of chicory (
Cichorium intybus
), leek (
Allium porrum
), and big bluestem (
Andropogon gerardii
). The lipids were analyzed by shotgun lipidomics using a high-resolution hybrid mass spectrometer. Size range between 1350 and 1550 Da was chosen for the detection of potential biomarkers among cardiolipins (1,3-bis(
sn
-3′-phosphatidyl)-
sn
-glycerols), a specific class of phospholipids. The analysis revealed a variety of molecular species, including cardiolipins containing one or two polyunsaturated fatty acids with 20 carbon atoms each, i.e., arachidonic and/or eicosapentaenoic acids, some of them apparently specific for the mycorrhizal samples. Although further verification using a greater variety of AM fungal species and samples from various soils/ecosystems/environmental conditions is needed, current results suggest the possibility to identify novel biochemical signatures specific for AM fungi within mycorrhizal roots. Whether they could be used for quantification of both root and soil colonization by the AM fungi merits further scrutiny. |
doi_str_mv | 10.1007/s00572-023-01129-1 |
format | article |
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Rhizophagus irregularis
and in nonmycorrhizal and mycorrhizal roots of chicory (
Cichorium intybus
), leek (
Allium porrum
), and big bluestem (
Andropogon gerardii
). The lipids were analyzed by shotgun lipidomics using a high-resolution hybrid mass spectrometer. Size range between 1350 and 1550 Da was chosen for the detection of potential biomarkers among cardiolipins (1,3-bis(
sn
-3′-phosphatidyl)-
sn
-glycerols), a specific class of phospholipids. The analysis revealed a variety of molecular species, including cardiolipins containing one or two polyunsaturated fatty acids with 20 carbon atoms each, i.e., arachidonic and/or eicosapentaenoic acids, some of them apparently specific for the mycorrhizal samples. Although further verification using a greater variety of AM fungal species and samples from various soils/ecosystems/environmental conditions is needed, current results suggest the possibility to identify novel biochemical signatures specific for AM fungi within mycorrhizal roots. Whether they could be used for quantification of both root and soil colonization by the AM fungi merits further scrutiny.</description><identifier>ISSN: 0940-6360</identifier><identifier>EISSN: 1432-1890</identifier><identifier>DOI: 10.1007/s00572-023-01129-1</identifier><identifier>PMID: 37814097</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer Berlin Heidelberg</publisher><subject>Agriculture ; Allium porrum ; Andropogon gerardii ; Arbuscular mycorrhizas ; Biomarkers ; Biomedical and Life Sciences ; Carbon ; Chemical properties ; Cichorium intybus ; Ecology ; Environmental conditions ; Fatty acids ; Forestry ; Fungi ; Gene sequencing ; Life Sciences ; Lipids ; Microbiology ; Microorganisms ; Nucleotide sequence ; Nutrients ; Phospholipids ; Physicochemical properties ; Plant Sciences ; Polyunsaturated fatty acids ; Ribosomal DNA ; Roots ; Soil chemistry ; Soil properties ; Soils ; Sterols</subject><ispartof>Mycorrhiza, 2023-11, Vol.33 (5-6), p.399-408</ispartof><rights>The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature 2023. Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law.</rights><rights>2023. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c326t-6c207e31c6863fb4b95febfa07287fba3fe978464a211f60e8ff5056e371d2583</cites><orcidid>0000-0002-0331-1774 ; 0000-0003-3546-2718 ; 0000-0002-8704-9645 ; 0000-0002-6901-0413</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/37814097$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Řezanka, Tomáš</creatorcontrib><creatorcontrib>Hršelová, Hana</creatorcontrib><creatorcontrib>Kyselová, Lucie</creatorcontrib><creatorcontrib>Jansa, Jan</creatorcontrib><title>Can cardiolipins be used as a biomarker for arbuscular mycorrhizal fungi?</title><title>Mycorrhiza</title><addtitle>Mycorrhiza</addtitle><addtitle>Mycorrhiza</addtitle><description>Specific biomarker molecules are increasingly being used for detection and quantification in plant and soil samples of arbuscular mycorrhizal (AM) fungi, an important and widespread microbial guild heavily implicated in transfers of nutrients and carbon between plants and soils and in the maintenance of soil physico-chemical properties. Yet, concerns have previously been raised as to the validity of a range of previously used approaches (e.g., microscopy, AM-specific fatty acids, sterols, glomalin-like molecules, ribosomal DNA sequences), justifying further research into novel biomarkers for AM fungal abundance and/or functioning. Here, we focused on complex polar lipids contained in pure biomass of
Rhizophagus irregularis
and in nonmycorrhizal and mycorrhizal roots of chicory (
Cichorium intybus
), leek (
Allium porrum
), and big bluestem (
Andropogon gerardii
). The lipids were analyzed by shotgun lipidomics using a high-resolution hybrid mass spectrometer. Size range between 1350 and 1550 Da was chosen for the detection of potential biomarkers among cardiolipins (1,3-bis(
sn
-3′-phosphatidyl)-
sn
-glycerols), a specific class of phospholipids. The analysis revealed a variety of molecular species, including cardiolipins containing one or two polyunsaturated fatty acids with 20 carbon atoms each, i.e., arachidonic and/or eicosapentaenoic acids, some of them apparently specific for the mycorrhizal samples. Although further verification using a greater variety of AM fungal species and samples from various soils/ecosystems/environmental conditions is needed, current results suggest the possibility to identify novel biochemical signatures specific for AM fungi within mycorrhizal roots. Whether they could be used for quantification of both root and soil colonization by the AM fungi merits further scrutiny.</description><subject>Agriculture</subject><subject>Allium porrum</subject><subject>Andropogon gerardii</subject><subject>Arbuscular mycorrhizas</subject><subject>Biomarkers</subject><subject>Biomedical and Life Sciences</subject><subject>Carbon</subject><subject>Chemical properties</subject><subject>Cichorium intybus</subject><subject>Ecology</subject><subject>Environmental conditions</subject><subject>Fatty acids</subject><subject>Forestry</subject><subject>Fungi</subject><subject>Gene sequencing</subject><subject>Life Sciences</subject><subject>Lipids</subject><subject>Microbiology</subject><subject>Microorganisms</subject><subject>Nucleotide sequence</subject><subject>Nutrients</subject><subject>Phospholipids</subject><subject>Physicochemical properties</subject><subject>Plant Sciences</subject><subject>Polyunsaturated fatty acids</subject><subject>Ribosomal DNA</subject><subject>Roots</subject><subject>Soil chemistry</subject><subject>Soil properties</subject><subject>Soils</subject><subject>Sterols</subject><issn>0940-6360</issn><issn>1432-1890</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><recordid>eNp9kD1PwzAQhi0EoqXwBxiQJRYWw52d2MmEUMVHpUosMFtOYpeUNCl2M5RfjyEFJAamG-659-4eQk4RLhFAXQWAVHEGXDBA5DnDPTLGRHCGWQ77ZAx5AkwKCSNyFMISAJUUeEhGQmWYQK7GZDY1LS2Nr-quqdd1G2hhaR9sRU2ghhZ1tzL-1XrqOk-NL_pQ9o3xdLUtO-9f6nfTUNe3i_r6mBw40wR7sqsT8nx3-zR9YPPH-9n0Zs5KweWGyZKDsgJLmUnhiqTIU2cLZ0DxTLnCCGdzlSUyMRzRSbCZcymk0gqFFU8zMSEXQ-7ad2-9DRu9qkNpm8a0tuuDjjGpyFAkIqLnf9Bl1_s2Xqd5DlJymacqUnygSt-F4K3Ta1_Hr7caQX-K1oNoHUXrL9Ea49DZLrovVrb6Gfk2GwExACG22oX1v7v_if0AFpSHNg</recordid><startdate>20231101</startdate><enddate>20231101</enddate><creator>Řezanka, Tomáš</creator><creator>Hršelová, Hana</creator><creator>Kyselová, Lucie</creator><creator>Jansa, Jan</creator><general>Springer Berlin Heidelberg</general><general>Springer Nature B.V</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7T7</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0002-0331-1774</orcidid><orcidid>https://orcid.org/0000-0003-3546-2718</orcidid><orcidid>https://orcid.org/0000-0002-8704-9645</orcidid><orcidid>https://orcid.org/0000-0002-6901-0413</orcidid></search><sort><creationdate>20231101</creationdate><title>Can cardiolipins be used as a biomarker for arbuscular mycorrhizal fungi?</title><author>Řezanka, Tomáš ; 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Yet, concerns have previously been raised as to the validity of a range of previously used approaches (e.g., microscopy, AM-specific fatty acids, sterols, glomalin-like molecules, ribosomal DNA sequences), justifying further research into novel biomarkers for AM fungal abundance and/or functioning. Here, we focused on complex polar lipids contained in pure biomass of
Rhizophagus irregularis
and in nonmycorrhizal and mycorrhizal roots of chicory (
Cichorium intybus
), leek (
Allium porrum
), and big bluestem (
Andropogon gerardii
). The lipids were analyzed by shotgun lipidomics using a high-resolution hybrid mass spectrometer. Size range between 1350 and 1550 Da was chosen for the detection of potential biomarkers among cardiolipins (1,3-bis(
sn
-3′-phosphatidyl)-
sn
-glycerols), a specific class of phospholipids. The analysis revealed a variety of molecular species, including cardiolipins containing one or two polyunsaturated fatty acids with 20 carbon atoms each, i.e., arachidonic and/or eicosapentaenoic acids, some of them apparently specific for the mycorrhizal samples. Although further verification using a greater variety of AM fungal species and samples from various soils/ecosystems/environmental conditions is needed, current results suggest the possibility to identify novel biochemical signatures specific for AM fungi within mycorrhizal roots. Whether they could be used for quantification of both root and soil colonization by the AM fungi merits further scrutiny.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer Berlin Heidelberg</pub><pmid>37814097</pmid><doi>10.1007/s00572-023-01129-1</doi><tpages>10</tpages><orcidid>https://orcid.org/0000-0002-0331-1774</orcidid><orcidid>https://orcid.org/0000-0003-3546-2718</orcidid><orcidid>https://orcid.org/0000-0002-8704-9645</orcidid><orcidid>https://orcid.org/0000-0002-6901-0413</orcidid></addata></record> |
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subjects | Agriculture Allium porrum Andropogon gerardii Arbuscular mycorrhizas Biomarkers Biomedical and Life Sciences Carbon Chemical properties Cichorium intybus Ecology Environmental conditions Fatty acids Forestry Fungi Gene sequencing Life Sciences Lipids Microbiology Microorganisms Nucleotide sequence Nutrients Phospholipids Physicochemical properties Plant Sciences Polyunsaturated fatty acids Ribosomal DNA Roots Soil chemistry Soil properties Soils Sterols |
title | Can cardiolipins be used as a biomarker for arbuscular mycorrhizal fungi? |
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