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A novel approach for spectral unmixing, classification, and concentration estimation of chemical and biological agents
In this paper, spectral unmixing methods, which are extensively used in hyperspectral imaging area, are proposed for classification and abundance fraction (concentration) estimation of chemical and biological agents that exist in the mixture form. Several government-furnished datasets, which were co...
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Published in: | IEEE transactions on geoscience and remote sensing 2006-02, Vol.44 (2), p.409-419 |
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description | In this paper, spectral unmixing methods, which are extensively used in hyperspectral imaging area, are proposed for classification and abundance fraction (concentration) estimation of chemical and biological agents that exist in the mixture form. Several government-furnished datasets, which were collected through the infrared spectrum method, were thoroughly analyzed. Two similarity measures-the spectral angle mapper and spectral information divergence-were investigated in order to provide a quantitative comparison basis with respect to the performance of the applied spectral unmixing methods in the existence of similar and distinct agents. The use of the similarity measures provided valuable information about the signature characteristics of the agents, which led to a better understanding about the capabilities of the investigated methods. The orthogonal subspace projection (OSP) method was investigated as the first unmixing, classification, and abundance estimation technique. It was observed that the OSP method provided good results when the number of agents in the database was small and was composed of distinct agents. However, when the number of agents was incremented by adding agents that share similar characteristics, the abundance estimation accuracy gradually degraded in addition to generating negative abundance fraction estimates. The second investigated unmixing method was called nonnegatively constrained least squares (NCLS). The results and analyses indicated that the NCLS method outperformed the OSP approach by providing considerably more accurate fraction estimates while at the same time not generating any negative fraction estimates; thus, the use of the NCLS method was found to be promising in detection and abundance fraction estimation of chemical and biological agents that exist in the form of mixtures. In addition, efficient implementation of NCLS has resulted in much lower computations than the conventional OSP implementation. |
doi_str_mv | 10.1109/TGRS.2005.860985 |
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Several government-furnished datasets, which were collected through the infrared spectrum method, were thoroughly analyzed. Two similarity measures-the spectral angle mapper and spectral information divergence-were investigated in order to provide a quantitative comparison basis with respect to the performance of the applied spectral unmixing methods in the existence of similar and distinct agents. The use of the similarity measures provided valuable information about the signature characteristics of the agents, which led to a better understanding about the capabilities of the investigated methods. The orthogonal subspace projection (OSP) method was investigated as the first unmixing, classification, and abundance estimation technique. It was observed that the OSP method provided good results when the number of agents in the database was small and was composed of distinct agents. However, when the number of agents was incremented by adding agents that share similar characteristics, the abundance estimation accuracy gradually degraded in addition to generating negative abundance fraction estimates. The second investigated unmixing method was called nonnegatively constrained least squares (NCLS). The results and analyses indicated that the NCLS method outperformed the OSP approach by providing considerably more accurate fraction estimates while at the same time not generating any negative fraction estimates; thus, the use of the NCLS method was found to be promising in detection and abundance fraction estimation of chemical and biological agents that exist in the form of mixtures. In addition, efficient implementation of NCLS has resulted in much lower computations than the conventional OSP implementation.</description><identifier>ISSN: 0196-2892</identifier><identifier>EISSN: 1558-0644</identifier><identifier>DOI: 10.1109/TGRS.2005.860985</identifier><identifier>CODEN: IGRSD2</identifier><language>eng</language><publisher>New York, NY: IEEE</publisher><subject>Abundance ; Applied geophysics ; Biochemical analysis ; Biological ; Biological agent detection ; Biology computing ; Character generation ; chemical agent detection ; Chemical analysis ; Classification ; Degradation ; Earth sciences ; Earth, ocean, space ; Engineering and environment geology. Geothermics ; Estimates ; Exact sciences and technology ; Goniometers ; Hyperspectral imaging ; Infrared spectra ; Internal geophysics ; Least squares methods ; Methods ; nonnegatively constrained least squares (NCLS) ; orthogonal subspace projection (OSP) ; Pollution, environment geology ; Reagents ; Similarity ; Spectra ; Studies</subject><ispartof>IEEE transactions on geoscience and remote sensing, 2006-02, Vol.44 (2), p.409-419</ispartof><rights>2006 INIST-CNRS</rights><rights>Copyright The Institute of Electrical and Electronics Engineers, Inc. (IEEE) 2006</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c447t-851882652bfb321efdc386f1f67e0d9f0ee64cb0f544df96eb3d1fed0d7e4e953</citedby><cites>FETCH-LOGICAL-c447t-851882652bfb321efdc386f1f67e0d9f0ee64cb0f544df96eb3d1fed0d7e4e953</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://ieeexplore.ieee.org/document/1580726$$EHTML$$P50$$Gieee$$H</linktohtml><link.rule.ids>314,780,784,27924,27925,54796</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=17445296$$DView record in Pascal Francis$$Hfree_for_read</backlink></links><search><creatorcontrib>Kwan, C.</creatorcontrib><creatorcontrib>Ayhan, B.</creatorcontrib><creatorcontrib>Chen, G.</creatorcontrib><creatorcontrib>Jing Wang</creatorcontrib><creatorcontrib>Baohong Ji</creatorcontrib><creatorcontrib>Chein-I Chang</creatorcontrib><title>A novel approach for spectral unmixing, classification, and concentration estimation of chemical and biological agents</title><title>IEEE transactions on geoscience and remote sensing</title><addtitle>TGRS</addtitle><description>In this paper, spectral unmixing methods, which are extensively used in hyperspectral imaging area, are proposed for classification and abundance fraction (concentration) estimation of chemical and biological agents that exist in the mixture form. Several government-furnished datasets, which were collected through the infrared spectrum method, were thoroughly analyzed. Two similarity measures-the spectral angle mapper and spectral information divergence-were investigated in order to provide a quantitative comparison basis with respect to the performance of the applied spectral unmixing methods in the existence of similar and distinct agents. The use of the similarity measures provided valuable information about the signature characteristics of the agents, which led to a better understanding about the capabilities of the investigated methods. The orthogonal subspace projection (OSP) method was investigated as the first unmixing, classification, and abundance estimation technique. It was observed that the OSP method provided good results when the number of agents in the database was small and was composed of distinct agents. However, when the number of agents was incremented by adding agents that share similar characteristics, the abundance estimation accuracy gradually degraded in addition to generating negative abundance fraction estimates. The second investigated unmixing method was called nonnegatively constrained least squares (NCLS). The results and analyses indicated that the NCLS method outperformed the OSP approach by providing considerably more accurate fraction estimates while at the same time not generating any negative fraction estimates; thus, the use of the NCLS method was found to be promising in detection and abundance fraction estimation of chemical and biological agents that exist in the form of mixtures. In addition, efficient implementation of NCLS has resulted in much lower computations than the conventional OSP implementation.</description><subject>Abundance</subject><subject>Applied geophysics</subject><subject>Biochemical analysis</subject><subject>Biological</subject><subject>Biological agent detection</subject><subject>Biology computing</subject><subject>Character generation</subject><subject>chemical agent detection</subject><subject>Chemical analysis</subject><subject>Classification</subject><subject>Degradation</subject><subject>Earth sciences</subject><subject>Earth, ocean, space</subject><subject>Engineering and environment geology. Geothermics</subject><subject>Estimates</subject><subject>Exact sciences and technology</subject><subject>Goniometers</subject><subject>Hyperspectral imaging</subject><subject>Infrared spectra</subject><subject>Internal geophysics</subject><subject>Least squares methods</subject><subject>Methods</subject><subject>nonnegatively constrained least squares (NCLS)</subject><subject>orthogonal subspace projection (OSP)</subject><subject>Pollution, environment geology</subject><subject>Reagents</subject><subject>Similarity</subject><subject>Spectra</subject><subject>Studies</subject><issn>0196-2892</issn><issn>1558-0644</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2006</creationdate><recordtype>article</recordtype><recordid>eNqNks1rFTEUxQdR8FndC26CYO2i87zJ5HNZirZCQdC6HjKZm9eUeckzea_of2-mUyi4KK7y9Ts3Nyenad5SWFMK5tP1xfcfawYg1lqC0eJZs6JC6BYk58-bFVAjW6YNe9m8KuUWgHJB1aq5OyMx3eFE7G6Xk3U3xKdMyg7dPtuJHOI2_A5xc0rcZEsJPji7DymeEhtH4lJ0GCs4bxEs-7BdpskTd4PbCk_34BDSlDbLclMV5XXzwtup4JuH8aj5-eXz9flle_Xt4uv52VXrOFf7VguqNZOCDX7oGEU_uk5LT71UCKPxgCi5G8ALzkdvJA7dSD2OMCrkaER31Hxc6tbH_TrUDvttKA6nyUZMh9JrDdIoELSSx0-S1TttDGP_AYJU1e0KnjwJUqWgq7_D58vf_4PepkOO1ZleS6EAtFAVggVyOZWS0fe7XA3Pf3oK_ZyBfs5AP2egXzJQJR8e6tpSzffZRhfKo05xLth9q-8WLiDi47HQoJjs_gJ7ertJ</recordid><startdate>20060201</startdate><enddate>20060201</enddate><creator>Kwan, C.</creator><creator>Ayhan, B.</creator><creator>Chen, G.</creator><creator>Jing Wang</creator><creator>Baohong Ji</creator><creator>Chein-I Chang</creator><general>IEEE</general><general>Institute of Electrical and Electronics Engineers</general><general>The Institute of Electrical and Electronics Engineers, Inc. (IEEE)</general><scope>97E</scope><scope>RIA</scope><scope>RIE</scope><scope>IQODW</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7UA</scope><scope>8FD</scope><scope>C1K</scope><scope>F1W</scope><scope>FR3</scope><scope>H8D</scope><scope>H96</scope><scope>KR7</scope><scope>L.G</scope><scope>L7M</scope><scope>7SP</scope><scope>F28</scope><scope>7U5</scope></search><sort><creationdate>20060201</creationdate><title>A novel approach for spectral unmixing, classification, and concentration estimation of chemical and biological agents</title><author>Kwan, C. ; Ayhan, B. ; Chen, G. ; Jing Wang ; Baohong Ji ; Chein-I Chang</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c447t-851882652bfb321efdc386f1f67e0d9f0ee64cb0f544df96eb3d1fed0d7e4e953</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2006</creationdate><topic>Abundance</topic><topic>Applied geophysics</topic><topic>Biochemical analysis</topic><topic>Biological</topic><topic>Biological agent detection</topic><topic>Biology computing</topic><topic>Character generation</topic><topic>chemical agent detection</topic><topic>Chemical analysis</topic><topic>Classification</topic><topic>Degradation</topic><topic>Earth sciences</topic><topic>Earth, ocean, space</topic><topic>Engineering and environment geology. Geothermics</topic><topic>Estimates</topic><topic>Exact sciences and technology</topic><topic>Goniometers</topic><topic>Hyperspectral imaging</topic><topic>Infrared spectra</topic><topic>Internal geophysics</topic><topic>Least squares methods</topic><topic>Methods</topic><topic>nonnegatively constrained least squares (NCLS)</topic><topic>orthogonal subspace projection (OSP)</topic><topic>Pollution, environment geology</topic><topic>Reagents</topic><topic>Similarity</topic><topic>Spectra</topic><topic>Studies</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Kwan, C.</creatorcontrib><creatorcontrib>Ayhan, B.</creatorcontrib><creatorcontrib>Chen, G.</creatorcontrib><creatorcontrib>Jing Wang</creatorcontrib><creatorcontrib>Baohong Ji</creatorcontrib><creatorcontrib>Chein-I Chang</creatorcontrib><collection>IEEE All-Society Periodicals Package (ASPP) 2005-present</collection><collection>IEEE All-Society Periodicals Package (ASPP) 1998-Present</collection><collection>IEEE Xplore</collection><collection>Pascal-Francis</collection><collection>CrossRef</collection><collection>Water Resources Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Engineering Research Database</collection><collection>Aerospace Database</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 2: Ocean Technology, Policy & Non-Living Resources</collection><collection>Civil Engineering Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>Electronics & Communications Abstracts</collection><collection>ANTE: Abstracts in New Technology & Engineering</collection><collection>Solid State and Superconductivity Abstracts</collection><jtitle>IEEE transactions on geoscience and remote sensing</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kwan, C.</au><au>Ayhan, B.</au><au>Chen, G.</au><au>Jing Wang</au><au>Baohong Ji</au><au>Chein-I Chang</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A novel approach for spectral unmixing, classification, and concentration estimation of chemical and biological agents</atitle><jtitle>IEEE transactions on geoscience and remote sensing</jtitle><stitle>TGRS</stitle><date>2006-02-01</date><risdate>2006</risdate><volume>44</volume><issue>2</issue><spage>409</spage><epage>419</epage><pages>409-419</pages><issn>0196-2892</issn><eissn>1558-0644</eissn><coden>IGRSD2</coden><abstract>In this paper, spectral unmixing methods, which are extensively used in hyperspectral imaging area, are proposed for classification and abundance fraction (concentration) estimation of chemical and biological agents that exist in the mixture form. Several government-furnished datasets, which were collected through the infrared spectrum method, were thoroughly analyzed. Two similarity measures-the spectral angle mapper and spectral information divergence-were investigated in order to provide a quantitative comparison basis with respect to the performance of the applied spectral unmixing methods in the existence of similar and distinct agents. The use of the similarity measures provided valuable information about the signature characteristics of the agents, which led to a better understanding about the capabilities of the investigated methods. The orthogonal subspace projection (OSP) method was investigated as the first unmixing, classification, and abundance estimation technique. It was observed that the OSP method provided good results when the number of agents in the database was small and was composed of distinct agents. However, when the number of agents was incremented by adding agents that share similar characteristics, the abundance estimation accuracy gradually degraded in addition to generating negative abundance fraction estimates. The second investigated unmixing method was called nonnegatively constrained least squares (NCLS). The results and analyses indicated that the NCLS method outperformed the OSP approach by providing considerably more accurate fraction estimates while at the same time not generating any negative fraction estimates; thus, the use of the NCLS method was found to be promising in detection and abundance fraction estimation of chemical and biological agents that exist in the form of mixtures. In addition, efficient implementation of NCLS has resulted in much lower computations than the conventional OSP implementation.</abstract><cop>New York, NY</cop><pub>IEEE</pub><doi>10.1109/TGRS.2005.860985</doi><tpages>11</tpages></addata></record> |
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subjects | Abundance Applied geophysics Biochemical analysis Biological Biological agent detection Biology computing Character generation chemical agent detection Chemical analysis Classification Degradation Earth sciences Earth, ocean, space Engineering and environment geology. Geothermics Estimates Exact sciences and technology Goniometers Hyperspectral imaging Infrared spectra Internal geophysics Least squares methods Methods nonnegatively constrained least squares (NCLS) orthogonal subspace projection (OSP) Pollution, environment geology Reagents Similarity Spectra Studies |
title | A novel approach for spectral unmixing, classification, and concentration estimation of chemical and biological agents |
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