Banff scoring of kidney allograft biopsies: "Manual" application vs software-assisted sign-out

• Published in: American journal of clinical pathology 2024-06, Vol.161 (6), p.543-552
• Main Authors: Demetris, Anthony J, Lesniak, Andrew J, Popp, Benjamin A, Frencho, Ronald J, Minervini, Marta I, Nalesnik, Michael A, El Hag, Mohamed I, Hariharan, Sundaram, Randhawa, Parmjeet S
• Format: Article
• Language: English
• ISSN: 1943-7722
• DOI: 10.1093/ajcp/aqad180

Pathologists interpreting kidney allograft biopsies using the Banff system usually start by recording component scores (eg, i, t, cg) using histopathologic criteria committed to memory. Component scores are then melded into diagnoses using the same manual/mental processes. This approach to complex Banff rules during routine sign-out produces a lack of fidelity and needs improvement. We constructed a web-based "smart template" (software-assisted sign-out) system that uniquely starts with upstream Banff-defined additional diagnostic parameters (eg, infection) and histopathologic criteria (eg, percent interstitial inflammation) collectively referred to as feeder data that is then translated into component scores and integrated into final diagnoses using software-encoded decision trees. Software-assisted sign-out enables pathologists to (1) accurately and uniformly apply Banff rules, thereby eliminating human inconsistencies (present in 25% of the cohort); (2) document areas of improvement; (3) show improved correlation with function; (4) examine t-Distributed Stochastic Neighbor Embedding clustering for diagnosis stratification; and (5) ready upstream incorporation of artificial intelligence-assisted scoring of biopsies. Compared with the legacy approach, software-assisted sign-out improves Banff accuracy and fidelity, more closely correlates with kidney function, is practical for routine clinical work and translational research studies, facilitates downstream integration with nonpathology data, and readies biopsy scoring for artificial intelligence algorithms.