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Why classical receptor theory, which ignores allostery, can effectively measure the strength of an allosteric effect as agonist's efficacy
Background and Purpose The classical theory of receptor action has been used for decades as a powerful tool to estimate molecular determinants of ligand‐induced receptor activation (i.e., affinity and efficacy) from experimentally observable biological responses. However, it is also a well‐recognize...
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Published in: | British journal of pharmacology 2024-06, Vol.181 (12), p.1757-1767 |
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creator | Onaran, H. Ongun Costa, Tommaso |
description | Background and Purpose
The classical theory of receptor action has been used for decades as a powerful tool to estimate molecular determinants of ligand‐induced receptor activation (i.e., affinity and efficacy) from experimentally observable biological responses. However, it is also a well‐recognized fact that the receptor‐binding and activation mechanisms, and the parameters thereof, described in the classical theory contradict with the modern view of receptor activation based on allosteric principles.
Experimental Approach
We used mathematical analysis, along with some numerical simulations, to answer the key question as to what extent the classical theory is compatible—if at all—with the modern understanding of receptor activation.
Key Results
Here, we showed conclusively that (1) receptor activation equations based on allosteric principles contain the logic of the classical theory in disguise, and therefore, (2) estimates of “intrinsic efficacy” (ε) obtained by means of classical techniques (i.e., null methods or fitting the operational model to concentration‐response data) are equivalent to the allosteric coupling factors that represent the molecular efficacy of ligands.
Conclusion and Implications
Thus, we conclude that despite the justified criticisms it has received so far, the classical theory may continue to be useful in estimating ligand efficacy from experimental data, if used properly. Here, we also provide rigorous criteria for the proper use of the theory. These findings not only have implications for ligand classification but also resolve some long lasting discussions in the field of bias agonism in GPCR, which requires reasonable estimates of relative ligand efficacies at different signalling pathways. |
doi_str_mv | 10.1111/bph.16327 |
format | article |
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The classical theory of receptor action has been used for decades as a powerful tool to estimate molecular determinants of ligand‐induced receptor activation (i.e., affinity and efficacy) from experimentally observable biological responses. However, it is also a well‐recognized fact that the receptor‐binding and activation mechanisms, and the parameters thereof, described in the classical theory contradict with the modern view of receptor activation based on allosteric principles.
Experimental Approach
We used mathematical analysis, along with some numerical simulations, to answer the key question as to what extent the classical theory is compatible—if at all—with the modern understanding of receptor activation.
Key Results
Here, we showed conclusively that (1) receptor activation equations based on allosteric principles contain the logic of the classical theory in disguise, and therefore, (2) estimates of “intrinsic efficacy” (ε) obtained by means of classical techniques (i.e., null methods or fitting the operational model to concentration‐response data) are equivalent to the allosteric coupling factors that represent the molecular efficacy of ligands.
Conclusion and Implications
Thus, we conclude that despite the justified criticisms it has received so far, the classical theory may continue to be useful in estimating ligand efficacy from experimental data, if used properly. Here, we also provide rigorous criteria for the proper use of the theory. These findings not only have implications for ligand classification but also resolve some long lasting discussions in the field of bias agonism in GPCR, which requires reasonable estimates of relative ligand efficacies at different signalling pathways.</description><identifier>ISSN: 0007-1188</identifier><identifier>EISSN: 1476-5381</identifier><identifier>DOI: 10.1111/bph.16327</identifier><identifier>PMID: 38343142</identifier><language>eng</language><publisher>England: Blackwell Publishing Ltd</publisher><subject>agonism ; Allosteric properties ; allosterism ; cell signalling ; cooperativity ; Coupling factors ; efficacy ; G protein-coupled receptors ; GPCR ; Ligands ; quantitative receptor theory ; Receptor mechanisms ; Signal transduction</subject><ispartof>British journal of pharmacology, 2024-06, Vol.181 (12), p.1757-1767</ispartof><rights>2024 The Authors. published by John Wiley & Sons Ltd on behalf of British Pharmacological Society.</rights><rights>2024 The Authors. British Journal of Pharmacology published by John Wiley & Sons Ltd on behalf of British Pharmacological Society.</rights><rights>2024. This article is published under http://creativecommons.org/licenses/by-nc-nd/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c3487-6a97e826f287835458acdd546b37d69882b68023b40d89b5c62b6ebac4699b83</cites><orcidid>0000-0001-6766-4774 ; 0000-0002-8729-3357</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27923,27924</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/38343142$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Onaran, H. Ongun</creatorcontrib><creatorcontrib>Costa, Tommaso</creatorcontrib><title>Why classical receptor theory, which ignores allostery, can effectively measure the strength of an allosteric effect as agonist's efficacy</title><title>British journal of pharmacology</title><addtitle>Br J Pharmacol</addtitle><description>Background and Purpose
The classical theory of receptor action has been used for decades as a powerful tool to estimate molecular determinants of ligand‐induced receptor activation (i.e., affinity and efficacy) from experimentally observable biological responses. However, it is also a well‐recognized fact that the receptor‐binding and activation mechanisms, and the parameters thereof, described in the classical theory contradict with the modern view of receptor activation based on allosteric principles.
Experimental Approach
We used mathematical analysis, along with some numerical simulations, to answer the key question as to what extent the classical theory is compatible—if at all—with the modern understanding of receptor activation.
Key Results
Here, we showed conclusively that (1) receptor activation equations based on allosteric principles contain the logic of the classical theory in disguise, and therefore, (2) estimates of “intrinsic efficacy” (ε) obtained by means of classical techniques (i.e., null methods or fitting the operational model to concentration‐response data) are equivalent to the allosteric coupling factors that represent the molecular efficacy of ligands.
Conclusion and Implications
Thus, we conclude that despite the justified criticisms it has received so far, the classical theory may continue to be useful in estimating ligand efficacy from experimental data, if used properly. Here, we also provide rigorous criteria for the proper use of the theory. These findings not only have implications for ligand classification but also resolve some long lasting discussions in the field of bias agonism in GPCR, which requires reasonable estimates of relative ligand efficacies at different signalling pathways.</description><subject>agonism</subject><subject>Allosteric properties</subject><subject>allosterism</subject><subject>cell signalling</subject><subject>cooperativity</subject><subject>Coupling factors</subject><subject>efficacy</subject><subject>G protein-coupled receptors</subject><subject>GPCR</subject><subject>Ligands</subject><subject>quantitative receptor theory</subject><subject>Receptor mechanisms</subject><subject>Signal transduction</subject><issn>0007-1188</issn><issn>1476-5381</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><sourceid>24P</sourceid><recordid>eNp1kU1rFTEUhoMo9ra68A9IwIUVnDYfk49ZalErFHRRcBkymTN3UnIn12SmZf6Cv9qM99aFYDaBc573SeBF6BUlF7Scy3Y_XFDJmXqCNrRWshJc06doQwhRFaVan6DTnO8IKUslnqMTrnnNac026NePYcEu2Jy9swEncLCfYsLTADEt7_HD4N2A_XaMCTK2IcQ8wbpwdsTQ9-Amfw9hwTuweU6wBnGeEozbacCxxwV7THl3TGBbVNs4-jy9zeusvO2WF-hZb0OGl8f7DN1-_nR7dV3dfPvy9erDTeV4rVUlbaNAM9kzrTQXtdDWdZ2oZctVJxutWSs1YbytSaebVjhZBtBaV8umaTU_Q-cH7T7FnzPkyex8dhCCHSHO2bCGSaJUo1lB3_yD3sU5jeVzhhPBuBZcrNS7A-VSzDlBb_bJ72xaDCVm7ceUfsyffgr7-mic2x10f8nHQgpweQAefIDl_ybz8fv1QfkbY7qaoQ</recordid><startdate>202406</startdate><enddate>202406</enddate><creator>Onaran, H. Ongun</creator><creator>Costa, Tommaso</creator><general>Blackwell Publishing Ltd</general><scope>24P</scope><scope>WIN</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QP</scope><scope>7TK</scope><scope>K9.</scope><scope>NAPCQ</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0001-6766-4774</orcidid><orcidid>https://orcid.org/0000-0002-8729-3357</orcidid></search><sort><creationdate>202406</creationdate><title>Why classical receptor theory, which ignores allostery, can effectively measure the strength of an allosteric effect as agonist's efficacy</title><author>Onaran, H. Ongun ; Costa, Tommaso</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c3487-6a97e826f287835458acdd546b37d69882b68023b40d89b5c62b6ebac4699b83</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>agonism</topic><topic>Allosteric properties</topic><topic>allosterism</topic><topic>cell signalling</topic><topic>cooperativity</topic><topic>Coupling factors</topic><topic>efficacy</topic><topic>G protein-coupled receptors</topic><topic>GPCR</topic><topic>Ligands</topic><topic>quantitative receptor theory</topic><topic>Receptor mechanisms</topic><topic>Signal transduction</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Onaran, H. Ongun</creatorcontrib><creatorcontrib>Costa, Tommaso</creatorcontrib><collection>Wiley-Blackwell Open Access Collection</collection><collection>Wiley Online Library Journals</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Calcium & Calcified Tissue Abstracts</collection><collection>Neurosciences Abstracts</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Nursing & Allied Health Premium</collection><collection>MEDLINE - Academic</collection><jtitle>British journal of pharmacology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Onaran, H. Ongun</au><au>Costa, Tommaso</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Why classical receptor theory, which ignores allostery, can effectively measure the strength of an allosteric effect as agonist's efficacy</atitle><jtitle>British journal of pharmacology</jtitle><addtitle>Br J Pharmacol</addtitle><date>2024-06</date><risdate>2024</risdate><volume>181</volume><issue>12</issue><spage>1757</spage><epage>1767</epage><pages>1757-1767</pages><issn>0007-1188</issn><eissn>1476-5381</eissn><abstract>Background and Purpose
The classical theory of receptor action has been used for decades as a powerful tool to estimate molecular determinants of ligand‐induced receptor activation (i.e., affinity and efficacy) from experimentally observable biological responses. However, it is also a well‐recognized fact that the receptor‐binding and activation mechanisms, and the parameters thereof, described in the classical theory contradict with the modern view of receptor activation based on allosteric principles.
Experimental Approach
We used mathematical analysis, along with some numerical simulations, to answer the key question as to what extent the classical theory is compatible—if at all—with the modern understanding of receptor activation.
Key Results
Here, we showed conclusively that (1) receptor activation equations based on allosteric principles contain the logic of the classical theory in disguise, and therefore, (2) estimates of “intrinsic efficacy” (ε) obtained by means of classical techniques (i.e., null methods or fitting the operational model to concentration‐response data) are equivalent to the allosteric coupling factors that represent the molecular efficacy of ligands.
Conclusion and Implications
Thus, we conclude that despite the justified criticisms it has received so far, the classical theory may continue to be useful in estimating ligand efficacy from experimental data, if used properly. Here, we also provide rigorous criteria for the proper use of the theory. These findings not only have implications for ligand classification but also resolve some long lasting discussions in the field of bias agonism in GPCR, which requires reasonable estimates of relative ligand efficacies at different signalling pathways.</abstract><cop>England</cop><pub>Blackwell Publishing Ltd</pub><pmid>38343142</pmid><doi>10.1111/bph.16327</doi><tpages>11</tpages><orcidid>https://orcid.org/0000-0001-6766-4774</orcidid><orcidid>https://orcid.org/0000-0002-8729-3357</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | agonism Allosteric properties allosterism cell signalling cooperativity Coupling factors efficacy G protein-coupled receptors GPCR Ligands quantitative receptor theory Receptor mechanisms Signal transduction |
title | Why classical receptor theory, which ignores allostery, can effectively measure the strength of an allosteric effect as agonist's efficacy |
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