Examining the efficiency of porcine gastric mucin-coated magnetic beads in extraction of noroviruses from frozen berries

• Published in: Food microbiology 2024-06, Vol.120, p.104461-104461, Article 104461
• Main Authors: Plante, Daniel, Barrera, Julio Alexander Bran, Lord, Maude, Harlow, Jennifer, Iugovaz, Irène, Nasheri, Neda
• Format: Article
• Language: English
• Subjects: Animals; Droplet digital PCR; Extraction method; Fruit - metabolism; Gastric Mucins; Humans; Immunomagnetic Separation; Magnetic beads; Magnetic Phenomena; Mice; Norovirus; RNA, Viral - genetics; Swine; Viruses - genetics
• ISSN: 0740-0020; 1095-9998
• DOI: 10.1016/j.fm.2023.104461

Human norovirus is the leading cause of foodborne gastroenteritis worldwide. Due to the low infectious dose of noroviruses, sensitive methodologies are required to detect and characterize small numbers of viral particles that are found in contaminated foods. The ISO 15216 method, which is internationally recognized for detection of foodborne viruses from high-risk food commodities, is based on viral precipitation, followed by RNA extraction and identification of the viral genome by RT-PCR. Although the ISO 15216 method is efficient, it is time consuming and tedious, does not report on the viral infectivity, and is sensitive to the presence of RT-PCR inhibitors. Norovirus capture by the porcine gastric mucin conjugated magnetic beads (PGM-MB) was developed as an alternative virus recovery method. It relies on the integrity of the viral capsid being able to bind to PGM. PGM contains a variety of histo-blood group antigens (HBGAs) that act as norovirus receptors. Therefore, the PGM-MB method allows for extraction of noroviruses, with potentially intact viral capsids, from complex food matrices. The viral genome can then be released through heat-shock of the captured virus. For this reason, we performed a parallel comparison between the ISO 15216 method and the PGM-MB method in isolation and quantification of noroviruses from frozen raspberries. We have demonstrated that the efficiency of the PGM-MB method in extraction of murine norovirus (MNV) and human norovirus GII.4 from raspberries is equal or better than the ISO 15216 method, while the PGM-MB has fewer steps and shorter turnaround time. Moreover, the PGM-MB method is more efficient in removing the inhibitors prior to RT-PCR analysis. •Contamination of frozen berries with foodborne viruses have resulted in many outbreaks.•Norovirus isolation using PGM-MB has fewer steps compared to the ISO-15216 method.•The PGM-MB method has comparable efficiency compared to the ISO-15216 method.•The PGM-MB method is more efficient in removing inhibitors compared to the ISO-15216 method.