Prognostic value of inflammation and immune-related gene NOD2 in clear cell renal cell carcinoma

• Published in: Human cell : official journal of Human Cell Research Society 2024-05, Vol.37 (3), p.782-800
• Main Authors: Lyu, Lei, Min, Rui, Zheng, Fuxin, Xiang, Wei, Huang, Tao, Feng, Yan, Zhang, Chuanhua, Yuan, Jingdong
• Format: Article
• Language: English
• Subjects: Biomarkers; Biomedical and Life Sciences; Carcinoma; Carcinoma, Renal Cell - genetics; CD4 antigen; CD8 antigen; Cell Biology; Cell proliferation; Clear cell-type renal cell carcinoma; Dendritic cells; Genomes; Gynecology; Humans; Infiltration; Inflammation; Inflammation - genetics; Innate immunity; Interleukin 8; Interleukin-8 - genetics; Kidney cancer; Kidney Neoplasms - genetics; Leukocytes (neutrophilic); Life Sciences; Lymphocytes B; Lymphocytes T; Macrophages; Metastases; MicroRNAs - genetics; mRNA; NOD2 protein; Nod2 Signaling Adaptor Protein - genetics; Oligomerization; Oncology; Prognosis; Reproductive Medicine; Research Article; Stem Cells; Surgery; Tumorigenesis
• ISSN: 1749-0774; 0914-7470; 1749-0774
• DOI: 10.1007/s13577-024-01045-2

Inflammation and immune responses play important roles in cancer development and prognosis. We identified 59 upregulated inflammation- and immune-related genes (IIRGs) in clear cell renal cell carcinoma (ccRCC) from The Cancer Genome Atlas database. Among the upregulated IIRGs, nucleotide binding oligomerization domain 2 (NOD2), PYD and CARD domain (PYCARD) were also confirmed to be upregulated in the Oncomine database and in three independent GEO data sets. Tumor immune infiltration resource database analysis revealed that NOD2 and PYCARD levels were significantly positively correlated with infiltration levels of B cells, CD4+ T cells, CD8+ T cells, neutrophils, macrophages and dendritic cells. Multivariate Cox hazards regression analysis indicated that based on clinical variables (age, gender, tumor grade, pathological TNM stage), NOD2, but not PYCARD, was an independent, unfavorable ccRCC prognostic biomarker. Functional enrichment analyses (GSEA) showed that NOD2 was involved in innate immune responses, inflammatory responses, and regulation of cytokine secretion. Meanwhile, mRNA and protein levels of NOD2 were elevated in four ccRCC cell lines (786-O, ACHN, A498 and Caki-1), and its knockdown significantly inhibited IL-8 secretion, thereby inhibiting ccRCC cell proliferation and invasion. Furthermore, results showed that miR-20b-5p targeted NOD2 to alleviate NOD2-mediated IL-8 secretion. In conclusion, NOD2 is a potential prognostic biomarker for ccRCC and the miR-20b-5p/NOD2/IL-8 axis may regulate inflammation- and immune-mediated tumorigenesis in ccRCC.