DNA adductomics aided rapid screening of genotoxic impurities using nucleosides and 3D bioprinted human liver organoids

• Published in: Talanta (Oxford) 2024-06, Vol.273, p.125902-125902, Article 125902
• Main Authors: Li, Ying, Xu, Chen, Zhou, Xueting, Li, Jinhong, Xu, Shiting, Tu, Yuanbo, Mu, Xue, Huang, Jiajun, Huang, Qing, Kang, Lifeng, Wang, Huaisong, Zhang, Mei, Yuan, Yaozuo, Wu, Chunyong, Zhang, Junying
• Format: Article
• Language: English
• Subjects: 3D bioprinted human liver organoids; Animals; Chromatography, Liquid; DNA; DNA adduct; DNA Adducts; DNA Damage; Genotoxicity; Humans; Lansoprazole; Lansoprazole impurity; Liver; Nucleosides - toxicity; Organoids; Rats; Tandem Mass Spectrometry
• ISSN: 0039-9140; 1873-3573
• DOI: 10.1016/j.talanta.2024.125902

Current genotoxicity assessment methods are mainly employed to verify the genotoxic safety of drugs, but do not allow for rapid screening of specific genotoxic impurities (GTIs). In this study, a new approach for the recognition of GTIs has been proposed. It is to expose the complex samples to an in vitro nucleoside incubation model, and then draw complete DNA adduct profiles to infer the structures of potential genotoxic impurities (PGIs). Subsequently, the genotoxicity is confirmed in human by 3D bioprinted human liver organoids. To verify the feasibility of the approach, lansoprazole chloride compound (Lanchlor), a PGI during the synthesis of lansoprazole, was selected as the model drug. After confirming genotoxicity by Comet assay, it was exposed to different models to map and compare the DNA adduct profiles by LC-MS/MS. The results showed Lanchlor could generate diverse DNA adducts, revealing firstly its genotoxicity at molecular mechanism of action. Furthermore, the largest variety and content of DNA adducts were observed in the nucleoside incubation model, while the human liver organoids exhibited similar results with rats. The results showed that the combination of DNA adductomics and 3D bioprinted organoids were useful for the rapid screening of GTIs. [Display omitted] •The genotoxicity of Lanchlor was affirmed.•The specific induced DNA adduct profiles of Lanchlor were first unveiled.•UiO-66, as a nanosorbent, was applied for the enrichment of DNA adducts for the first time.•An innovative strategy for rapid in vitro screening of GTIs was introduced and successfully validated.