Expression and Characterization of an Efficient Alginate Lyase from Psychromonas sp. SP041 through Metagenomics Analysis of Rotten Kelp

• Published in: Genes 2024-05, Vol.15 (5), p.598
• Main Authors: Wang, Ping, Cai, Yi, Zhong, Hua, Chen, Ruiting, Yi, Yuetao, Ye, Yanrui, Li, Lili
• Format: Article
• Language: English
• Subjects: Algae; Alginate lyase; Alginates - metabolism; Alginic acid; Amino acids; Bacteria; Bacterial Proteins - genetics; Bacterial Proteins - metabolism; Biological activity; Biotechnology; Carbon dioxide; Chloroflexi - enzymology; Chloroflexi - genetics; Chromatography; Cloning; Cobalt; E coli; Energy consumption; Enzymatic activity; Enzymes; Escherichia coli - genetics; Genes; Kelp - genetics; Magnesium; Metagenomics; Metagenomics - methods; Metal ions; Microorganisms; Molecular weight; Oligosaccharides; Peptides; Polysaccharide-Lyases - chemistry; Polysaccharide-Lyases - genetics; Polysaccharide-Lyases - metabolism; Proteins; Seaweeds; Substrate Specificity
• ISSN: 2073-4425; 2073-4425
• DOI: 10.3390/genes15050598

Alginate is derived from brown algae, which can be cultivated in large quantities. It can be broken down by alginate lyase into alginate oligosaccharides (AOSs), which exhibit a higher added value and better bioactivity than alginate. In this study, metagenomic technology was used to screen for genes that code for high-efficiency alginate lyases. The candidate alginate lyase gene was detected from sp. SP041, the most abundant species among alginate lyase bacteria on selected rotten kelps. The alginate lyase Alg169 was heterologously expressed in BL21 (DE3), Ni-IDA-purified, and characterized. The optimum temperature and pH of Alg169 were 25 °C and 7.0, respectively. Metal ions including Mn , Co , Ca , Mg , Ni , and Ba led to significantly increased enzyme activity. Alg169 exhibited a pronounced dependence on Na , and upon treatment with Mn , its activity surged by 687.57%, resulting in the highest observed enzyme activity of 117,081 U/mg. Bioinformatic analysis predicted that Alg169 would be a double-domain lyase with a molecular weight of 65.58 kDa. It is a bifunctional enzyme with substrate specificity to polyguluronic acid (polyG) and polymannuronic acid (polyM). These results suggest that Alg169 is a promising candidate for the efficient manufacturing of AOSs from brown seaweed.