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Dual-Recognition-Mediated Autocatalytic Amplification Assay for the Subpopulations of PD-L1 Positive Extracellular Vesicle
The PD-L1 protein on extracellular vesicles (EVs) is a promising biomarker for tumor immunotherapy. However, PD-L1+ EVs have various cell origins, so further analysis of the subpopulations is essential to help understand better their relationship with tumor immunotherapy. Different from the previous...
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Published in: | Analytical chemistry (Washington) 2024-06, Vol.96 (23), p.9585-9592 |
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description | The PD-L1 protein on extracellular vesicles (EVs) is a promising biomarker for tumor immunotherapy. However, PD-L1+ EVs have various cell origins, so further analysis of the subpopulations is essential to help understand better their relationship with tumor immunotherapy. Different from the previous work which focus on the level of total PD-L1+ EVs expression, we, herein, report a dual-recognition mediated autocatalytic amplification (DRMAA) assay to detect the PD-L1 derived from tumors (EpCAM+), immune T cells (CD3+), and total (Lipids) EVs, respectively. The DRMAA assay employed proximity hybridization to construct a complete trigger sequence and then catalyzed the cross-hybridization of three hairpin probes, producing a three-way DNA junction (3-WJ) structure carrying the newly exposed trigger sequence. The 3-WJ complex subsequently initiated an autocatalytic amplification reaction and higher sensitivity than the traditional catalytic hairpin assembly assay was obtained. It was found that the EpCAM+ and PD-L1+ EVs were more effective than others in distinguishing lung cancer patients from healthy people. Surprisingly, the CD3+ and PD-L1+ EVs in lung cancer patients were also upregulated, indicating that immune cell-derived PD-L1+ EVs are also non-negligible marker in a tumor microenvironment. Our results suggested that the DRMAA assay would improve the study of subpopulations of PD-L1+ EVs to provide new insights for cancer immunotherapies. |
doi_str_mv | 10.1021/acs.analchem.4c01111 |
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However, PD-L1+ EVs have various cell origins, so further analysis of the subpopulations is essential to help understand better their relationship with tumor immunotherapy. Different from the previous work which focus on the level of total PD-L1+ EVs expression, we, herein, report a dual-recognition mediated autocatalytic amplification (DRMAA) assay to detect the PD-L1 derived from tumors (EpCAM+), immune T cells (CD3+), and total (Lipids) EVs, respectively. The DRMAA assay employed proximity hybridization to construct a complete trigger sequence and then catalyzed the cross-hybridization of three hairpin probes, producing a three-way DNA junction (3-WJ) structure carrying the newly exposed trigger sequence. The 3-WJ complex subsequently initiated an autocatalytic amplification reaction and higher sensitivity than the traditional catalytic hairpin assembly assay was obtained. It was found that the EpCAM+ and PD-L1+ EVs were more effective than others in distinguishing lung cancer patients from healthy people. Surprisingly, the CD3+ and PD-L1+ EVs in lung cancer patients were also upregulated, indicating that immune cell-derived PD-L1+ EVs are also non-negligible marker in a tumor microenvironment. Our results suggested that the DRMAA assay would improve the study of subpopulations of PD-L1+ EVs to provide new insights for cancer immunotherapies.</description><identifier>ISSN: 0003-2700</identifier><identifier>ISSN: 1520-6882</identifier><identifier>EISSN: 1520-6882</identifier><identifier>DOI: 10.1021/acs.analchem.4c01111</identifier><identifier>PMID: 38816678</identifier><language>eng</language><publisher>United States: American Chemical Society</publisher><subject>Amplification ; Assaying ; B7-H1 Antigen - genetics ; B7-H1 Antigen - metabolism ; Biomarkers ; Biomarkers, Tumor ; Cancer immunotherapy ; Catalysis ; CD3 antigen ; DNA probes ; DNA structure ; Epithelial Cell Adhesion Molecule - metabolism ; Extracellular vesicles ; Extracellular Vesicles - chemistry ; Extracellular Vesicles - metabolism ; Humans ; Hybridization ; Immune system ; Immunotherapy ; L1 protein ; Lipids ; Lung cancer ; Lung Neoplasms - genetics ; Lung Neoplasms - immunology ; Lung Neoplasms - metabolism ; Lymphocytes ; Lymphocytes T ; Nucleic Acid Amplification Techniques - methods ; Nucleic Acid Hybridization ; Nucleotide sequence ; PD-L1 protein ; Recognition ; Subpopulations ; Tumor microenvironment ; Tumors</subject><ispartof>Analytical chemistry (Washington), 2024-06, Vol.96 (23), p.9585-9592</ispartof><rights>2024 American Chemical Society</rights><rights>Copyright American Chemical Society Jun 11, 2024</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-a255t-a91f2ae0637eed3e3208ebe8cedac3b653655bd822144df7799932e84026e2dd3</cites><orcidid>0000-0002-7908-2672</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27923,27924</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/38816678$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Ren, Yongan</creatorcontrib><creatorcontrib>Ge, Ke</creatorcontrib><creatorcontrib>Tang, QiaoQiao</creatorcontrib><creatorcontrib>Liang, Xiaoxuan</creatorcontrib><creatorcontrib>Fan, Linlin</creatorcontrib><creatorcontrib>Ye, Kai</creatorcontrib><creatorcontrib>Wang, Min</creatorcontrib><creatorcontrib>Yao, Bo</creatorcontrib><title>Dual-Recognition-Mediated Autocatalytic Amplification Assay for the Subpopulations of PD-L1 Positive Extracellular Vesicle</title><title>Analytical chemistry (Washington)</title><addtitle>Anal. Chem</addtitle><description>The PD-L1 protein on extracellular vesicles (EVs) is a promising biomarker for tumor immunotherapy. However, PD-L1+ EVs have various cell origins, so further analysis of the subpopulations is essential to help understand better their relationship with tumor immunotherapy. Different from the previous work which focus on the level of total PD-L1+ EVs expression, we, herein, report a dual-recognition mediated autocatalytic amplification (DRMAA) assay to detect the PD-L1 derived from tumors (EpCAM+), immune T cells (CD3+), and total (Lipids) EVs, respectively. The DRMAA assay employed proximity hybridization to construct a complete trigger sequence and then catalyzed the cross-hybridization of three hairpin probes, producing a three-way DNA junction (3-WJ) structure carrying the newly exposed trigger sequence. The 3-WJ complex subsequently initiated an autocatalytic amplification reaction and higher sensitivity than the traditional catalytic hairpin assembly assay was obtained. It was found that the EpCAM+ and PD-L1+ EVs were more effective than others in distinguishing lung cancer patients from healthy people. Surprisingly, the CD3+ and PD-L1+ EVs in lung cancer patients were also upregulated, indicating that immune cell-derived PD-L1+ EVs are also non-negligible marker in a tumor microenvironment. Our results suggested that the DRMAA assay would improve the study of subpopulations of PD-L1+ EVs to provide new insights for cancer immunotherapies.</description><subject>Amplification</subject><subject>Assaying</subject><subject>B7-H1 Antigen - genetics</subject><subject>B7-H1 Antigen - metabolism</subject><subject>Biomarkers</subject><subject>Biomarkers, Tumor</subject><subject>Cancer immunotherapy</subject><subject>Catalysis</subject><subject>CD3 antigen</subject><subject>DNA probes</subject><subject>DNA structure</subject><subject>Epithelial Cell Adhesion Molecule - metabolism</subject><subject>Extracellular vesicles</subject><subject>Extracellular Vesicles - chemistry</subject><subject>Extracellular Vesicles - metabolism</subject><subject>Humans</subject><subject>Hybridization</subject><subject>Immune system</subject><subject>Immunotherapy</subject><subject>L1 protein</subject><subject>Lipids</subject><subject>Lung cancer</subject><subject>Lung Neoplasms - genetics</subject><subject>Lung Neoplasms - immunology</subject><subject>Lung Neoplasms - metabolism</subject><subject>Lymphocytes</subject><subject>Lymphocytes T</subject><subject>Nucleic Acid Amplification Techniques - methods</subject><subject>Nucleic Acid Hybridization</subject><subject>Nucleotide sequence</subject><subject>PD-L1 protein</subject><subject>Recognition</subject><subject>Subpopulations</subject><subject>Tumor microenvironment</subject><subject>Tumors</subject><issn>0003-2700</issn><issn>1520-6882</issn><issn>1520-6882</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><recordid>eNp9kc1u3CAUhVHVqpmkfYOqQuomG0_5sTFejvIvTZQoabu1MFw3RHhwAFedPH2YzCSLLMIGCb7zXcRB6Bslc0oY_al0nKuVcvoOhnmpCc3rA5rRipFCSMk-ohkhhBesJmQP7cd4TzJDqPiM9riUVIhaztDj8aRccQPa_13ZZP2quARjVQKDF1PyWiXl1slqvBhGZ3ubDzKEFzGqNe59wOkO8O3UjX6c3PNdxL7H18fFkuJrH7PzH-CT_ykoDc5lJuA_EK128AV96pWL8HW3H6Dfpye_js6L5dXZxdFiWShWValQDe2ZAiJ4DWA4cEYkdCA1GKV5JyouqqozkjFalqav66ZpOANZEiaAGcMP0OHWOwb_MEFM7WDj5jFqBX6KLc_qUpCmkRn98Qa991PIn_xMyQ1VN5kqt5QOPsYAfTsGO6iwbilpN920uZv2pZt2102Ofd_Jp24A8xp6KSMDZAts4q-D33U-AdJSnxY</recordid><startdate>20240611</startdate><enddate>20240611</enddate><creator>Ren, Yongan</creator><creator>Ge, Ke</creator><creator>Tang, QiaoQiao</creator><creator>Liang, Xiaoxuan</creator><creator>Fan, Linlin</creator><creator>Ye, Kai</creator><creator>Wang, Min</creator><creator>Yao, Bo</creator><general>American Chemical Society</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QF</scope><scope>7QO</scope><scope>7QQ</scope><scope>7SC</scope><scope>7SE</scope><scope>7SP</scope><scope>7SR</scope><scope>7TA</scope><scope>7TB</scope><scope>7TM</scope><scope>7U5</scope><scope>7U7</scope><scope>7U9</scope><scope>8BQ</scope><scope>8FD</scope><scope>C1K</scope><scope>F28</scope><scope>FR3</scope><scope>H8D</scope><scope>H8G</scope><scope>H94</scope><scope>JG9</scope><scope>JQ2</scope><scope>KR7</scope><scope>L7M</scope><scope>L~C</scope><scope>L~D</scope><scope>P64</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0002-7908-2672</orcidid></search><sort><creationdate>20240611</creationdate><title>Dual-Recognition-Mediated Autocatalytic Amplification Assay for the Subpopulations of PD-L1 Positive Extracellular Vesicle</title><author>Ren, Yongan ; 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Chem</addtitle><date>2024-06-11</date><risdate>2024</risdate><volume>96</volume><issue>23</issue><spage>9585</spage><epage>9592</epage><pages>9585-9592</pages><issn>0003-2700</issn><issn>1520-6882</issn><eissn>1520-6882</eissn><abstract>The PD-L1 protein on extracellular vesicles (EVs) is a promising biomarker for tumor immunotherapy. However, PD-L1+ EVs have various cell origins, so further analysis of the subpopulations is essential to help understand better their relationship with tumor immunotherapy. Different from the previous work which focus on the level of total PD-L1+ EVs expression, we, herein, report a dual-recognition mediated autocatalytic amplification (DRMAA) assay to detect the PD-L1 derived from tumors (EpCAM+), immune T cells (CD3+), and total (Lipids) EVs, respectively. The DRMAA assay employed proximity hybridization to construct a complete trigger sequence and then catalyzed the cross-hybridization of three hairpin probes, producing a three-way DNA junction (3-WJ) structure carrying the newly exposed trigger sequence. The 3-WJ complex subsequently initiated an autocatalytic amplification reaction and higher sensitivity than the traditional catalytic hairpin assembly assay was obtained. It was found that the EpCAM+ and PD-L1+ EVs were more effective than others in distinguishing lung cancer patients from healthy people. Surprisingly, the CD3+ and PD-L1+ EVs in lung cancer patients were also upregulated, indicating that immune cell-derived PD-L1+ EVs are also non-negligible marker in a tumor microenvironment. Our results suggested that the DRMAA assay would improve the study of subpopulations of PD-L1+ EVs to provide new insights for cancer immunotherapies.</abstract><cop>United States</cop><pub>American Chemical Society</pub><pmid>38816678</pmid><doi>10.1021/acs.analchem.4c01111</doi><tpages>8</tpages><orcidid>https://orcid.org/0000-0002-7908-2672</orcidid></addata></record> |
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subjects | Amplification Assaying B7-H1 Antigen - genetics B7-H1 Antigen - metabolism Biomarkers Biomarkers, Tumor Cancer immunotherapy Catalysis CD3 antigen DNA probes DNA structure Epithelial Cell Adhesion Molecule - metabolism Extracellular vesicles Extracellular Vesicles - chemistry Extracellular Vesicles - metabolism Humans Hybridization Immune system Immunotherapy L1 protein Lipids Lung cancer Lung Neoplasms - genetics Lung Neoplasms - immunology Lung Neoplasms - metabolism Lymphocytes Lymphocytes T Nucleic Acid Amplification Techniques - methods Nucleic Acid Hybridization Nucleotide sequence PD-L1 protein Recognition Subpopulations Tumor microenvironment Tumors |
title | Dual-Recognition-Mediated Autocatalytic Amplification Assay for the Subpopulations of PD-L1 Positive Extracellular Vesicle |
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