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Tear Proteins Altered in Patients with Persistent Eye Pain after Refractive Surgery: Biomarker Candidate Discovery
Some patients develop persistent eye pain after refractive surgery, but factors that cause or sustain pain are unknown. We tested whether tear proteins of patients with pain 3 months after surgery differ from those of patients without pain. Patients undergoing refractive surgery (laser in situ kerat...
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Published in: | Journal of proteome research 2024-07, Vol.23 (7), p.2629-2640 |
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creator | Harkness, Brooke M. Chen, Siting Kim, Kilsun Reddy, Ashok P. McFarland, Trevor J. Hegarty, Deborah M. Everist, Steven J. Saugstad, Julie A. Lapidus, Jodi Galor, Anat Aicher, Sue A. |
description | Some patients develop persistent eye pain after refractive surgery, but factors that cause or sustain pain are unknown. We tested whether tear proteins of patients with pain 3 months after surgery differ from those of patients without pain. Patients undergoing refractive surgery (laser in situ keratomileusis or photorefractive keratectomy ) were recruited from 2 clinics, and tears were collected 3 months after surgery. Participants rated their eye pain using a numerical rating scale (NRS, 0–10; no pain–worst pain) at baseline, 1 day, and 3 months after surgery. Using tandem mass tag proteomic analysis, we examined tears from patients with pain [NRS ≥ 3 at 3 months (n = 16)] and patients with no pain [NRS ≤ 1 at 3 months (n = 32)] after surgery. A subset of proteins (83 of 2748 detected, 3.0%) were associated with pain 3 months after surgery. High-dimensional statistical models showed that the magnitude of differential expression was not the only important factor in classifying tear samples from pain patients. Models utilizing 3 or 4 proteins had better classification performance than single proteins and represented differences in both directions (higher or lower in pain). Thus, patterns of protein differences may serve as biomarkers of postsurgical eye pain as well as potential therapeutic targets. |
doi_str_mv | 10.1021/acs.jproteome.4c00339 |
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We tested whether tear proteins of patients with pain 3 months after surgery differ from those of patients without pain. Patients undergoing refractive surgery (laser in situ keratomileusis or photorefractive keratectomy ) were recruited from 2 clinics, and tears were collected 3 months after surgery. Participants rated their eye pain using a numerical rating scale (NRS, 0–10; no pain–worst pain) at baseline, 1 day, and 3 months after surgery. Using tandem mass tag proteomic analysis, we examined tears from patients with pain [NRS ≥ 3 at 3 months (n = 16)] and patients with no pain [NRS ≤ 1 at 3 months (n = 32)] after surgery. A subset of proteins (83 of 2748 detected, 3.0%) were associated with pain 3 months after surgery. High-dimensional statistical models showed that the magnitude of differential expression was not the only important factor in classifying tear samples from pain patients. Models utilizing 3 or 4 proteins had better classification performance than single proteins and represented differences in both directions (higher or lower in pain). Thus, patterns of protein differences may serve as biomarkers of postsurgical eye pain as well as potential therapeutic targets.</description><identifier>ISSN: 1535-3893</identifier><identifier>ISSN: 1535-3907</identifier><identifier>EISSN: 1535-3907</identifier><identifier>DOI: 10.1021/acs.jproteome.4c00339</identifier><identifier>PMID: 38885176</identifier><language>eng</language><publisher>United States: American Chemical Society</publisher><subject>Adult ; Biomarkers - metabolism ; Eye Pain - etiology ; Eye Proteins - analysis ; Eye Proteins - metabolism ; Female ; Humans ; Keratomileusis, Laser In Situ - adverse effects ; Male ; Middle Aged ; Pain, Postoperative - etiology ; Photorefractive Keratectomy - adverse effects ; Proteomics - methods ; Refractive Surgical Procedures - adverse effects ; Tandem Mass Spectrometry ; Tears - chemistry ; Tears - metabolism</subject><ispartof>Journal of proteome research, 2024-07, Vol.23 (7), p.2629-2640</ispartof><rights>2024 American Chemical Society</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-a229t-52a0d61456cf4b867a4d6696ea330e017f63e86efd949f3c2fe8d41c37fcf1e73</cites><orcidid>0000-0003-4787-3469</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/38885176$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Harkness, Brooke M.</creatorcontrib><creatorcontrib>Chen, Siting</creatorcontrib><creatorcontrib>Kim, Kilsun</creatorcontrib><creatorcontrib>Reddy, Ashok P.</creatorcontrib><creatorcontrib>McFarland, Trevor J.</creatorcontrib><creatorcontrib>Hegarty, Deborah M.</creatorcontrib><creatorcontrib>Everist, Steven J.</creatorcontrib><creatorcontrib>Saugstad, Julie A.</creatorcontrib><creatorcontrib>Lapidus, Jodi</creatorcontrib><creatorcontrib>Galor, Anat</creatorcontrib><creatorcontrib>Aicher, Sue A.</creatorcontrib><title>Tear Proteins Altered in Patients with Persistent Eye Pain after Refractive Surgery: Biomarker Candidate Discovery</title><title>Journal of proteome research</title><addtitle>J. Proteome Res</addtitle><description>Some patients develop persistent eye pain after refractive surgery, but factors that cause or sustain pain are unknown. We tested whether tear proteins of patients with pain 3 months after surgery differ from those of patients without pain. Patients undergoing refractive surgery (laser in situ keratomileusis or photorefractive keratectomy ) were recruited from 2 clinics, and tears were collected 3 months after surgery. Participants rated their eye pain using a numerical rating scale (NRS, 0–10; no pain–worst pain) at baseline, 1 day, and 3 months after surgery. Using tandem mass tag proteomic analysis, we examined tears from patients with pain [NRS ≥ 3 at 3 months (n = 16)] and patients with no pain [NRS ≤ 1 at 3 months (n = 32)] after surgery. A subset of proteins (83 of 2748 detected, 3.0%) were associated with pain 3 months after surgery. High-dimensional statistical models showed that the magnitude of differential expression was not the only important factor in classifying tear samples from pain patients. Models utilizing 3 or 4 proteins had better classification performance than single proteins and represented differences in both directions (higher or lower in pain). Thus, patterns of protein differences may serve as biomarkers of postsurgical eye pain as well as potential therapeutic targets.</description><subject>Adult</subject><subject>Biomarkers - metabolism</subject><subject>Eye Pain - etiology</subject><subject>Eye Proteins - analysis</subject><subject>Eye Proteins - metabolism</subject><subject>Female</subject><subject>Humans</subject><subject>Keratomileusis, Laser In Situ - adverse effects</subject><subject>Male</subject><subject>Middle Aged</subject><subject>Pain, Postoperative - etiology</subject><subject>Photorefractive Keratectomy - adverse effects</subject><subject>Proteomics - methods</subject><subject>Refractive Surgical Procedures - adverse effects</subject><subject>Tandem Mass Spectrometry</subject><subject>Tears - chemistry</subject><subject>Tears - metabolism</subject><issn>1535-3893</issn><issn>1535-3907</issn><issn>1535-3907</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><recordid>eNqFkFtPwyAUx4nRuDn9CBoefemE0kLr25zzkixx0fncMHpQZtdOoDP79jJ3efUJwv9yOD-ELinpUxLTG6lcf760jYdmAf1EEcJYfoS6NGVpxHIijvf3LGcddObcnBCaCsJOUYdlWZZSwbvITkFaPNn0mNrhQeXBQolNjSfSG6i9wz_Gf-IJWGecDw94tIYgBofUwYxfQVupvFkBfmvtB9j1Lb4zzULar6AOZV2aUnrA98apZhXkc3SiZeXgYnf20PvDaDp8isYvj8_DwTiScZz7KI0lKTlNUq50Msu4kEnJec5BMkaAUKE5g4yDLvMk10zFGrIyoYoJrTQFwXroetsbKH234HyxCF-AqpI1NK0rGBFE5LFgcbCmW6uyjXMWdLG0JmywLigpNriLgLs44C52uEPuajeinS2gPKT2fIOBbg1_-aa1ddj4n9JfB2qSNA</recordid><startdate>20240705</startdate><enddate>20240705</enddate><creator>Harkness, Brooke M.</creator><creator>Chen, Siting</creator><creator>Kim, Kilsun</creator><creator>Reddy, Ashok P.</creator><creator>McFarland, Trevor J.</creator><creator>Hegarty, Deborah M.</creator><creator>Everist, Steven J.</creator><creator>Saugstad, Julie A.</creator><creator>Lapidus, Jodi</creator><creator>Galor, Anat</creator><creator>Aicher, Sue A.</creator><general>American Chemical Society</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0003-4787-3469</orcidid></search><sort><creationdate>20240705</creationdate><title>Tear Proteins Altered in Patients with Persistent Eye Pain after Refractive Surgery: Biomarker Candidate Discovery</title><author>Harkness, Brooke M. ; Chen, Siting ; Kim, Kilsun ; Reddy, Ashok P. ; McFarland, Trevor J. ; Hegarty, Deborah M. ; Everist, Steven J. ; Saugstad, Julie A. ; Lapidus, Jodi ; Galor, Anat ; Aicher, Sue A.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a229t-52a0d61456cf4b867a4d6696ea330e017f63e86efd949f3c2fe8d41c37fcf1e73</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Adult</topic><topic>Biomarkers - metabolism</topic><topic>Eye Pain - etiology</topic><topic>Eye Proteins - analysis</topic><topic>Eye Proteins - metabolism</topic><topic>Female</topic><topic>Humans</topic><topic>Keratomileusis, Laser In Situ - adverse effects</topic><topic>Male</topic><topic>Middle Aged</topic><topic>Pain, Postoperative - etiology</topic><topic>Photorefractive Keratectomy - adverse effects</topic><topic>Proteomics - methods</topic><topic>Refractive Surgical Procedures - adverse effects</topic><topic>Tandem Mass Spectrometry</topic><topic>Tears - chemistry</topic><topic>Tears - metabolism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Harkness, Brooke M.</creatorcontrib><creatorcontrib>Chen, Siting</creatorcontrib><creatorcontrib>Kim, Kilsun</creatorcontrib><creatorcontrib>Reddy, Ashok P.</creatorcontrib><creatorcontrib>McFarland, Trevor J.</creatorcontrib><creatorcontrib>Hegarty, Deborah M.</creatorcontrib><creatorcontrib>Everist, Steven J.</creatorcontrib><creatorcontrib>Saugstad, Julie A.</creatorcontrib><creatorcontrib>Lapidus, Jodi</creatorcontrib><creatorcontrib>Galor, Anat</creatorcontrib><creatorcontrib>Aicher, Sue A.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of proteome research</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Harkness, Brooke M.</au><au>Chen, Siting</au><au>Kim, Kilsun</au><au>Reddy, Ashok P.</au><au>McFarland, Trevor J.</au><au>Hegarty, Deborah M.</au><au>Everist, Steven J.</au><au>Saugstad, Julie A.</au><au>Lapidus, Jodi</au><au>Galor, Anat</au><au>Aicher, Sue A.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Tear Proteins Altered in Patients with Persistent Eye Pain after Refractive Surgery: Biomarker Candidate Discovery</atitle><jtitle>Journal of proteome research</jtitle><addtitle>J. Proteome Res</addtitle><date>2024-07-05</date><risdate>2024</risdate><volume>23</volume><issue>7</issue><spage>2629</spage><epage>2640</epage><pages>2629-2640</pages><issn>1535-3893</issn><issn>1535-3907</issn><eissn>1535-3907</eissn><abstract>Some patients develop persistent eye pain after refractive surgery, but factors that cause or sustain pain are unknown. We tested whether tear proteins of patients with pain 3 months after surgery differ from those of patients without pain. Patients undergoing refractive surgery (laser in situ keratomileusis or photorefractive keratectomy ) were recruited from 2 clinics, and tears were collected 3 months after surgery. Participants rated their eye pain using a numerical rating scale (NRS, 0–10; no pain–worst pain) at baseline, 1 day, and 3 months after surgery. Using tandem mass tag proteomic analysis, we examined tears from patients with pain [NRS ≥ 3 at 3 months (n = 16)] and patients with no pain [NRS ≤ 1 at 3 months (n = 32)] after surgery. A subset of proteins (83 of 2748 detected, 3.0%) were associated with pain 3 months after surgery. High-dimensional statistical models showed that the magnitude of differential expression was not the only important factor in classifying tear samples from pain patients. Models utilizing 3 or 4 proteins had better classification performance than single proteins and represented differences in both directions (higher or lower in pain). Thus, patterns of protein differences may serve as biomarkers of postsurgical eye pain as well as potential therapeutic targets.</abstract><cop>United States</cop><pub>American Chemical Society</pub><pmid>38885176</pmid><doi>10.1021/acs.jproteome.4c00339</doi><tpages>12</tpages><orcidid>https://orcid.org/0000-0003-4787-3469</orcidid></addata></record> |
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subjects | Adult Biomarkers - metabolism Eye Pain - etiology Eye Proteins - analysis Eye Proteins - metabolism Female Humans Keratomileusis, Laser In Situ - adverse effects Male Middle Aged Pain, Postoperative - etiology Photorefractive Keratectomy - adverse effects Proteomics - methods Refractive Surgical Procedures - adverse effects Tandem Mass Spectrometry Tears - chemistry Tears - metabolism |
title | Tear Proteins Altered in Patients with Persistent Eye Pain after Refractive Surgery: Biomarker Candidate Discovery |
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