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Chromium contamination affects the fungal community and increases the complexity and stability of the network in long-term contaminated soils
Chromium (Cr) contamination can adversely affect soil ecology, yet our knowledge of how fungi respond to Cr contamination at heavily contaminated field sites remains relatively limited. This study employed high-throughput sequencing technology to analyze fungal community characteristics in soils wit...
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Published in: | Environmental research 2024-12, Vol.262 (Pt 2), p.119946, Article 119946 |
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creator | Yu, Hao Huang, Qi Men, Jianan Wang, Jian Xiao, Juanjuan Jin, Decai Deng, Ye |
description | Chromium (Cr) contamination can adversely affect soil ecology, yet our knowledge of how fungi respond to Cr contamination at heavily contaminated field sites remains relatively limited. This study employed high-throughput sequencing technology to analyze fungal community characteristics in soils with varying Cr concentrations. The results showed that Cr contamination significantly influenced soil fungi's relative abundance and structure. Mantel test analysis identified hexavalent chromium (Cr(VI)) as the primary factor affecting the structure of the soil fungal community. In addition, FUNGuild functional prediction analysis exhibited that Cr contamination reduced the relative abundance of Pathotroph and Symbiotroph trophic types. High concentrations of Cr may lead to a drop in the relative abundance of Animal Pathogens. Molecular ecological network analysis showed that Cr contamination increased interactions among soil fungi, thereby enhancing the stability and complexity of the network. Within these networks, specific keystone taxa, such as the genus Phanerochaete, exhibited properties capable of removing or reducing the toxicity of heavy metals. Our studies suggest that Cr contamination can alter indigenous fungal communities in soil systems, potentially impacting soil ecosystem function.
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•The response of the fungal community in a heavily Cr-contaminated site was studied.•Cr affects the diversity, composition, and structure of the fungal community.•Varying Cr levels alter fungal functional groups.•Cr contamination modifies microbial networks and enhances fungal interactions. |
doi_str_mv | 10.1016/j.envres.2024.119946 |
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•The response of the fungal community in a heavily Cr-contaminated site was studied.•Cr affects the diversity, composition, and structure of the fungal community.•Varying Cr levels alter fungal functional groups.•Cr contamination modifies microbial networks and enhances fungal interactions.</description><identifier>ISSN: 0013-9351</identifier><identifier>ISSN: 1096-0953</identifier><identifier>EISSN: 1096-0953</identifier><identifier>DOI: 10.1016/j.envres.2024.119946</identifier><identifier>PMID: 39276837</identifier><language>eng</language><publisher>Netherlands: Elsevier Inc</publisher><subject>Chromium ; Chromium - toxicity ; Co-occurrence network ; Fungal community ; Fungi - drug effects ; Fungi - genetics ; Heavily contaminated field ; Hexavalent chromium ; Mycobiome - drug effects ; Soil Microbiology ; Soil Pollutants - analysis ; Soil Pollutants - toxicity</subject><ispartof>Environmental research, 2024-12, Vol.262 (Pt 2), p.119946, Article 119946</ispartof><rights>2024 Elsevier Inc.</rights><rights>Copyright © 2024 Elsevier Inc. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c241t-e217a30f50de68fca1b2b4b3d5307ddb9ca7c60c5716d1bd350817accc0956373</cites><orcidid>0000-0002-7508-3299</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/39276837$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Yu, Hao</creatorcontrib><creatorcontrib>Huang, Qi</creatorcontrib><creatorcontrib>Men, Jianan</creatorcontrib><creatorcontrib>Wang, Jian</creatorcontrib><creatorcontrib>Xiao, Juanjuan</creatorcontrib><creatorcontrib>Jin, Decai</creatorcontrib><creatorcontrib>Deng, Ye</creatorcontrib><title>Chromium contamination affects the fungal community and increases the complexity and stability of the network in long-term contaminated soils</title><title>Environmental research</title><addtitle>Environ Res</addtitle><description>Chromium (Cr) contamination can adversely affect soil ecology, yet our knowledge of how fungi respond to Cr contamination at heavily contaminated field sites remains relatively limited. This study employed high-throughput sequencing technology to analyze fungal community characteristics in soils with varying Cr concentrations. The results showed that Cr contamination significantly influenced soil fungi's relative abundance and structure. Mantel test analysis identified hexavalent chromium (Cr(VI)) as the primary factor affecting the structure of the soil fungal community. In addition, FUNGuild functional prediction analysis exhibited that Cr contamination reduced the relative abundance of Pathotroph and Symbiotroph trophic types. High concentrations of Cr may lead to a drop in the relative abundance of Animal Pathogens. Molecular ecological network analysis showed that Cr contamination increased interactions among soil fungi, thereby enhancing the stability and complexity of the network. Within these networks, specific keystone taxa, such as the genus Phanerochaete, exhibited properties capable of removing or reducing the toxicity of heavy metals. Our studies suggest that Cr contamination can alter indigenous fungal communities in soil systems, potentially impacting soil ecosystem function.
[Display omitted]
•The response of the fungal community in a heavily Cr-contaminated site was studied.•Cr affects the diversity, composition, and structure of the fungal community.•Varying Cr levels alter fungal functional groups.•Cr contamination modifies microbial networks and enhances fungal interactions.</description><subject>Chromium</subject><subject>Chromium - toxicity</subject><subject>Co-occurrence network</subject><subject>Fungal community</subject><subject>Fungi - drug effects</subject><subject>Fungi - genetics</subject><subject>Heavily contaminated field</subject><subject>Hexavalent chromium</subject><subject>Mycobiome - drug effects</subject><subject>Soil Microbiology</subject><subject>Soil Pollutants - analysis</subject><subject>Soil Pollutants - toxicity</subject><issn>0013-9351</issn><issn>1096-0953</issn><issn>1096-0953</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><recordid>eNp9kc1OwzAQhC0EoqXwBgjlyCXFjvPTXJBQxZ9UiQucLcfetC6JXWwH6EPwzjikRZw4Wav5xqudQeic4CnBJL9aT0G_W3DTBCfplJCyTPMDNCa4zGNcZvQQjTEmNC5pRkboxLl1GElG8TEa0TIp8hktxuhrvrKmVV0bCaM9b5XmXhkd8boG4V3kVxDVnV7yJgBt22nltxHXMlJaWOAOBiRomwY-96LzvFJNP5n6R9fgP4x9Da6oMXoZe7B_N0KwGNW4U3RU88bB2e6doJe72-f5Q7x4un-c3yxikaTEx5CQglNcZ1hCPqsFJ1VSpRWV4bpCyqoUvBA5FllBckkqSTM8Cw4hRAgmpwWdoMvh3401bx04z1rlBDQN12A6xyjBWVr28QU0HVBhjXMWaraxquV2ywhmfRFszYYiWF8EG4oItovdhq5qQf6a9skH4HoAINz5rsAyJxRoAVLZkDyTRv2_4RvIop9t</recordid><startdate>20241201</startdate><enddate>20241201</enddate><creator>Yu, Hao</creator><creator>Huang, Qi</creator><creator>Men, Jianan</creator><creator>Wang, Jian</creator><creator>Xiao, Juanjuan</creator><creator>Jin, Decai</creator><creator>Deng, Ye</creator><general>Elsevier Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0002-7508-3299</orcidid></search><sort><creationdate>20241201</creationdate><title>Chromium contamination affects the fungal community and increases the complexity and stability of the network in long-term contaminated soils</title><author>Yu, Hao ; Huang, Qi ; Men, Jianan ; Wang, Jian ; Xiao, Juanjuan ; Jin, Decai ; Deng, Ye</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c241t-e217a30f50de68fca1b2b4b3d5307ddb9ca7c60c5716d1bd350817accc0956373</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Chromium</topic><topic>Chromium - toxicity</topic><topic>Co-occurrence network</topic><topic>Fungal community</topic><topic>Fungi - drug effects</topic><topic>Fungi - genetics</topic><topic>Heavily contaminated field</topic><topic>Hexavalent chromium</topic><topic>Mycobiome - drug effects</topic><topic>Soil Microbiology</topic><topic>Soil Pollutants - analysis</topic><topic>Soil Pollutants - toxicity</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Yu, Hao</creatorcontrib><creatorcontrib>Huang, Qi</creatorcontrib><creatorcontrib>Men, Jianan</creatorcontrib><creatorcontrib>Wang, Jian</creatorcontrib><creatorcontrib>Xiao, Juanjuan</creatorcontrib><creatorcontrib>Jin, Decai</creatorcontrib><creatorcontrib>Deng, Ye</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Environmental research</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Yu, Hao</au><au>Huang, Qi</au><au>Men, Jianan</au><au>Wang, Jian</au><au>Xiao, Juanjuan</au><au>Jin, Decai</au><au>Deng, Ye</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Chromium contamination affects the fungal community and increases the complexity and stability of the network in long-term contaminated soils</atitle><jtitle>Environmental research</jtitle><addtitle>Environ Res</addtitle><date>2024-12-01</date><risdate>2024</risdate><volume>262</volume><issue>Pt 2</issue><spage>119946</spage><pages>119946-</pages><artnum>119946</artnum><issn>0013-9351</issn><issn>1096-0953</issn><eissn>1096-0953</eissn><abstract>Chromium (Cr) contamination can adversely affect soil ecology, yet our knowledge of how fungi respond to Cr contamination at heavily contaminated field sites remains relatively limited. This study employed high-throughput sequencing technology to analyze fungal community characteristics in soils with varying Cr concentrations. The results showed that Cr contamination significantly influenced soil fungi's relative abundance and structure. Mantel test analysis identified hexavalent chromium (Cr(VI)) as the primary factor affecting the structure of the soil fungal community. In addition, FUNGuild functional prediction analysis exhibited that Cr contamination reduced the relative abundance of Pathotroph and Symbiotroph trophic types. High concentrations of Cr may lead to a drop in the relative abundance of Animal Pathogens. Molecular ecological network analysis showed that Cr contamination increased interactions among soil fungi, thereby enhancing the stability and complexity of the network. Within these networks, specific keystone taxa, such as the genus Phanerochaete, exhibited properties capable of removing or reducing the toxicity of heavy metals. Our studies suggest that Cr contamination can alter indigenous fungal communities in soil systems, potentially impacting soil ecosystem function.
[Display omitted]
•The response of the fungal community in a heavily Cr-contaminated site was studied.•Cr affects the diversity, composition, and structure of the fungal community.•Varying Cr levels alter fungal functional groups.•Cr contamination modifies microbial networks and enhances fungal interactions.</abstract><cop>Netherlands</cop><pub>Elsevier Inc</pub><pmid>39276837</pmid><doi>10.1016/j.envres.2024.119946</doi><orcidid>https://orcid.org/0000-0002-7508-3299</orcidid></addata></record> |
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subjects | Chromium Chromium - toxicity Co-occurrence network Fungal community Fungi - drug effects Fungi - genetics Heavily contaminated field Hexavalent chromium Mycobiome - drug effects Soil Microbiology Soil Pollutants - analysis Soil Pollutants - toxicity |
title | Chromium contamination affects the fungal community and increases the complexity and stability of the network in long-term contaminated soils |
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