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Classification of epidermal, buccal, penile and vaginal epithelial cells using morphological characteristics measured by imaging flow cytometry
As a result of the increased sensitivity of forensic DNA techniques, which can generate informative results from as little as a few cells, developing an understanding of the anatomical region these cells originate from is becoming more pertinent. Imaging Flow Cytometry (IFC) represents a promising m...
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Published in: | Forensic science international 2024-12, Vol.365, p.112274, Article 112274 |
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description | As a result of the increased sensitivity of forensic DNA techniques, which can generate informative results from as little as a few cells, developing an understanding of the anatomical region these cells originate from is becoming more pertinent. Imaging Flow Cytometry (IFC) represents a promising method for identifying epithelial cells from different anatomical regions. This project aimed to determine whether IFC could be used to distinguish epithelial cells collected from different forensically relevant anatomical regions based on their morphology and autofluorescence. Penile, vaginal, buccal, and epidermal epithelial cells were collected in triplicate from 15 male and 15 female participants, in three different age groups: 18–39, 40–59, and 60+ years. Using the high statistical output from the IFC, 234 morphological measurements were collected for 571,546 single cells. Using a linear discriminate analysis with a minimum posterior probability threshold, the four epithelial cell types could be identified and distinguished with a 72–83 % classification accuracy. The results showed that the age and biological sex of the individual had no effect on the morphology of the four epithelial cell types. These data provide insights into the ability of IFC to identify and distinguish penile, buccal, vaginal, and epidermal epithelial cells and identifies further avenues for improvement and optimisation.
•LDA differentiated four epithelial cells with 83 % accuracy.•90 % classification accuracy can be achieved with use of classification thresholds.•Age of an individual does not appear to influence cell morphology.•Sex of an individual also does not appear to influence cell morphology.•Samples from the same individual taken within a week showed higher association. |
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•LDA differentiated four epithelial cells with 83 % accuracy.•90 % classification accuracy can be achieved with use of classification thresholds.•Age of an individual does not appear to influence cell morphology.•Sex of an individual also does not appear to influence cell morphology.•Samples from the same individual taken within a week showed higher association.</description><identifier>ISSN: 0379-0738</identifier><identifier>ISSN: 1872-6283</identifier><identifier>EISSN: 1872-6283</identifier><identifier>DOI: 10.1016/j.forsciint.2024.112274</identifier><identifier>PMID: 39476741</identifier><language>eng</language><publisher>Ireland: Elsevier B.V</publisher><subject>Adolescent ; Adult ; Aged ; Biological effects ; Cell identification ; Cell morphology ; Cells ; Classification ; Conditional probability ; Discriminant Analysis ; DNA ; Epidermal Cells - cytology ; Epithelial cells ; Epithelial Cells - cytology ; Epithelium ; Ethnicity ; Female ; females ; Flow Cytometry ; Forensic science ; forensic sciences ; Hands ; Humans ; Identification ; Imaging flow cytometry ; Male ; males ; Middle Aged ; Morphology ; Mouth Mucosa - cytology ; Penis ; Penis - cytology ; Physical characteristics ; probability ; Software ; Statistical analysis ; Vagina ; Vagina - cytology ; Young Adult</subject><ispartof>Forensic science international, 2024-12, Vol.365, p.112274, Article 112274</ispartof><rights>2024 The Authors</rights><rights>Copyright © 2024 The Authors. Published by Elsevier B.V. All rights reserved.</rights><rights>2024. The Authors</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c357t-c3ab4e3e7aaa08c36e75fd8971b999c137705d165b805ca7c4303a21b7c885373</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27901,27902</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/39476741$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Ross, Dana</creatorcontrib><creatorcontrib>Taylor, Duncan</creatorcontrib><creatorcontrib>van Oorschot, Roland A.H.</creatorcontrib><creatorcontrib>Best, Giles</creatorcontrib><creatorcontrib>Goray, Mariya</creatorcontrib><title>Classification of epidermal, buccal, penile and vaginal epithelial cells using morphological characteristics measured by imaging flow cytometry</title><title>Forensic science international</title><addtitle>Forensic Sci Int</addtitle><description>As a result of the increased sensitivity of forensic DNA techniques, which can generate informative results from as little as a few cells, developing an understanding of the anatomical region these cells originate from is becoming more pertinent. Imaging Flow Cytometry (IFC) represents a promising method for identifying epithelial cells from different anatomical regions. This project aimed to determine whether IFC could be used to distinguish epithelial cells collected from different forensically relevant anatomical regions based on their morphology and autofluorescence. Penile, vaginal, buccal, and epidermal epithelial cells were collected in triplicate from 15 male and 15 female participants, in three different age groups: 18–39, 40–59, and 60+ years. Using the high statistical output from the IFC, 234 morphological measurements were collected for 571,546 single cells. Using a linear discriminate analysis with a minimum posterior probability threshold, the four epithelial cell types could be identified and distinguished with a 72–83 % classification accuracy. The results showed that the age and biological sex of the individual had no effect on the morphology of the four epithelial cell types. These data provide insights into the ability of IFC to identify and distinguish penile, buccal, vaginal, and epidermal epithelial cells and identifies further avenues for improvement and optimisation.
•LDA differentiated four epithelial cells with 83 % accuracy.•90 % classification accuracy can be achieved with use of classification thresholds.•Age of an individual does not appear to influence cell morphology.•Sex of an individual also does not appear to influence cell morphology.•Samples from the same individual taken within a week showed higher association.</description><subject>Adolescent</subject><subject>Adult</subject><subject>Aged</subject><subject>Biological effects</subject><subject>Cell identification</subject><subject>Cell morphology</subject><subject>Cells</subject><subject>Classification</subject><subject>Conditional probability</subject><subject>Discriminant Analysis</subject><subject>DNA</subject><subject>Epidermal Cells - cytology</subject><subject>Epithelial cells</subject><subject>Epithelial Cells - cytology</subject><subject>Epithelium</subject><subject>Ethnicity</subject><subject>Female</subject><subject>females</subject><subject>Flow Cytometry</subject><subject>Forensic science</subject><subject>forensic sciences</subject><subject>Hands</subject><subject>Humans</subject><subject>Identification</subject><subject>Imaging flow cytometry</subject><subject>Male</subject><subject>males</subject><subject>Middle Aged</subject><subject>Morphology</subject><subject>Mouth Mucosa - cytology</subject><subject>Penis</subject><subject>Penis - cytology</subject><subject>Physical characteristics</subject><subject>probability</subject><subject>Software</subject><subject>Statistical analysis</subject><subject>Vagina</subject><subject>Vagina - cytology</subject><subject>Young Adult</subject><issn>0379-0738</issn><issn>1872-6283</issn><issn>1872-6283</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><recordid>eNqNkU2P0zAQhi0EYsvCXwBLXDjQ4o84To6rii9pJS5wthxn0k7lxMF2FvVX8Jdx6LIHLnDxWPIzz8jzEvKKsx1nvH532g0hJoc45Z1gotpxLoSuHpENb7TY1qKRj8mGSd1umZbNFXmW0okxppSon5Ir2Va61hXfkJ97b1PCAZ3NGCYaBgoz9hBH69_SbnFurTNM6IHaqad39oCT9SuVj-CxXB14n-iScDrQMcT5GHw4FGF5OdpoXYaIKaNLdASblgg97c4Ux9V0oIMPP6g75zBCjufn5MlgfYIX9_WafPvw_uv-0_b2y8fP-5vbrZNK53LargIJ2lrLGidr0Grom1bzrm1bx6XWTPW8Vl3DlLPaVZJJK3inXdMoqeU1eXPxzjF8XyBlM2JaP2InCEsykquKK9Fq-R-oEPXvgQV9_Rd6Ckss61qpirNirXmh9IVyMaQUYTBzLNuIZ8OZWeM1J_MQr1njNZd4S-fLe__SjdA_9P3JswA3FwDK7u4QoikWmBz0GMFl0wf855BfYNS8gQ</recordid><startdate>20241201</startdate><enddate>20241201</enddate><creator>Ross, Dana</creator><creator>Taylor, Duncan</creator><creator>van Oorschot, Roland A.H.</creator><creator>Best, Giles</creator><creator>Goray, Mariya</creator><general>Elsevier B.V</general><general>Elsevier Limited</general><scope>6I.</scope><scope>AAFTH</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QP</scope><scope>7U7</scope><scope>C1K</scope><scope>K9.</scope><scope>NAPCQ</scope><scope>7X8</scope><scope>7S9</scope><scope>L.6</scope></search><sort><creationdate>20241201</creationdate><title>Classification of epidermal, buccal, penile and vaginal epithelial cells using morphological characteristics measured by imaging flow cytometry</title><author>Ross, Dana ; Taylor, Duncan ; van Oorschot, Roland A.H. ; Best, Giles ; Goray, Mariya</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c357t-c3ab4e3e7aaa08c36e75fd8971b999c137705d165b805ca7c4303a21b7c885373</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Adolescent</topic><topic>Adult</topic><topic>Aged</topic><topic>Biological effects</topic><topic>Cell identification</topic><topic>Cell morphology</topic><topic>Cells</topic><topic>Classification</topic><topic>Conditional probability</topic><topic>Discriminant Analysis</topic><topic>DNA</topic><topic>Epidermal Cells - cytology</topic><topic>Epithelial cells</topic><topic>Epithelial Cells - cytology</topic><topic>Epithelium</topic><topic>Ethnicity</topic><topic>Female</topic><topic>females</topic><topic>Flow Cytometry</topic><topic>Forensic science</topic><topic>forensic sciences</topic><topic>Hands</topic><topic>Humans</topic><topic>Identification</topic><topic>Imaging flow cytometry</topic><topic>Male</topic><topic>males</topic><topic>Middle Aged</topic><topic>Morphology</topic><topic>Mouth Mucosa - cytology</topic><topic>Penis</topic><topic>Penis - cytology</topic><topic>Physical characteristics</topic><topic>probability</topic><topic>Software</topic><topic>Statistical analysis</topic><topic>Vagina</topic><topic>Vagina - cytology</topic><topic>Young Adult</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ross, Dana</creatorcontrib><creatorcontrib>Taylor, Duncan</creatorcontrib><creatorcontrib>van Oorschot, Roland A.H.</creatorcontrib><creatorcontrib>Best, Giles</creatorcontrib><creatorcontrib>Goray, Mariya</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Calcium & Calcified Tissue Abstracts</collection><collection>Toxicology Abstracts</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Nursing & Allied Health Premium</collection><collection>MEDLINE - Academic</collection><collection>AGRICOLA</collection><collection>AGRICOLA - Academic</collection><jtitle>Forensic science international</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ross, Dana</au><au>Taylor, Duncan</au><au>van Oorschot, Roland A.H.</au><au>Best, Giles</au><au>Goray, Mariya</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Classification of epidermal, buccal, penile and vaginal epithelial cells using morphological characteristics measured by imaging flow cytometry</atitle><jtitle>Forensic science international</jtitle><addtitle>Forensic Sci Int</addtitle><date>2024-12-01</date><risdate>2024</risdate><volume>365</volume><spage>112274</spage><pages>112274-</pages><artnum>112274</artnum><issn>0379-0738</issn><issn>1872-6283</issn><eissn>1872-6283</eissn><abstract>As a result of the increased sensitivity of forensic DNA techniques, which can generate informative results from as little as a few cells, developing an understanding of the anatomical region these cells originate from is becoming more pertinent. Imaging Flow Cytometry (IFC) represents a promising method for identifying epithelial cells from different anatomical regions. This project aimed to determine whether IFC could be used to distinguish epithelial cells collected from different forensically relevant anatomical regions based on their morphology and autofluorescence. Penile, vaginal, buccal, and epidermal epithelial cells were collected in triplicate from 15 male and 15 female participants, in three different age groups: 18–39, 40–59, and 60+ years. Using the high statistical output from the IFC, 234 morphological measurements were collected for 571,546 single cells. Using a linear discriminate analysis with a minimum posterior probability threshold, the four epithelial cell types could be identified and distinguished with a 72–83 % classification accuracy. The results showed that the age and biological sex of the individual had no effect on the morphology of the four epithelial cell types. These data provide insights into the ability of IFC to identify and distinguish penile, buccal, vaginal, and epidermal epithelial cells and identifies further avenues for improvement and optimisation.
•LDA differentiated four epithelial cells with 83 % accuracy.•90 % classification accuracy can be achieved with use of classification thresholds.•Age of an individual does not appear to influence cell morphology.•Sex of an individual also does not appear to influence cell morphology.•Samples from the same individual taken within a week showed higher association.</abstract><cop>Ireland</cop><pub>Elsevier B.V</pub><pmid>39476741</pmid><doi>10.1016/j.forsciint.2024.112274</doi><oa>free_for_read</oa></addata></record> |
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subjects | Adolescent Adult Aged Biological effects Cell identification Cell morphology Cells Classification Conditional probability Discriminant Analysis DNA Epidermal Cells - cytology Epithelial cells Epithelial Cells - cytology Epithelium Ethnicity Female females Flow Cytometry Forensic science forensic sciences Hands Humans Identification Imaging flow cytometry Male males Middle Aged Morphology Mouth Mucosa - cytology Penis Penis - cytology Physical characteristics probability Software Statistical analysis Vagina Vagina - cytology Young Adult |
title | Classification of epidermal, buccal, penile and vaginal epithelial cells using morphological characteristics measured by imaging flow cytometry |
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