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Biotechnological applications of purine and pyrimidine deaminases
Deaminases, ubiquitous enzymes found in all living organisms from bacteria to humans, serve diverse and crucial functions. Notably, purine and pyrimidine deaminases, while biologically essential for regulating nucleotide pools, exhibit exceptional versatility in biotechnology. This review systematic...
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Published in: | Biotechnology advances 2024-12, Vol.77, p.108473, Article 108473 |
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description | Deaminases, ubiquitous enzymes found in all living organisms from bacteria to humans, serve diverse and crucial functions. Notably, purine and pyrimidine deaminases, while biologically essential for regulating nucleotide pools, exhibit exceptional versatility in biotechnology. This review systematically consolidates current knowledge on deaminases, showcasing their potential uses and relevance in the field of biotechnology. Thus, their transformative impact on pharmaceutical manufacturing is highlighted as catalysts for the synthesis of nucleic acid derivatives. Additionally, the role of deaminases in food bioprocessing and production is also explored, particularly in purine content reduction and caffeine production, showcasing their versatility in this field. The review also delves into most promising biomedical applications including deaminase-based GDEPT and genome and transcriptome editing by deaminase-based systems. All in all, illustrated with practical examples, we underscore the role of purine and pyrimidine deaminases in advancing sustainable and efficient biotechnological practices. Finally, the review highlights future challenges and prospects in deaminase-based biotechnological processes, encompassing both industrial and medical perspectives.
•Purine and pyrimidine deaminases (DAs) are efficient and eco-friendly alternative to chemical synthetic processes.•Purine and pyrimidine DAs exhibit exceptional versatility, significantly impacting in pharma and food industries.•DAs are valuable tools in gene-directed enzyme prodrug therapy (GDEPT) and genome and transcriptome editing systems. |
doi_str_mv | 10.1016/j.biotechadv.2024.108473 |
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•Purine and pyrimidine deaminases (DAs) are efficient and eco-friendly alternative to chemical synthetic processes.•Purine and pyrimidine DAs exhibit exceptional versatility, significantly impacting in pharma and food industries.•DAs are valuable tools in gene-directed enzyme prodrug therapy (GDEPT) and genome and transcriptome editing systems.</description><identifier>ISSN: 0734-9750</identifier><identifier>ISSN: 1873-1899</identifier><identifier>EISSN: 1873-1899</identifier><identifier>DOI: 10.1016/j.biotechadv.2024.108473</identifier><identifier>PMID: 39505057</identifier><language>eng</language><publisher>England: Elsevier Inc</publisher><subject>Animals ; Biocatalysis ; Biotechnology ; Biotechnology - methods ; Deaminases ; DNA and RNA editing ; Gene Editing ; Humans ; Nucleic acid derivatives ; Nucleotide Deaminases - genetics ; Nucleotide Deaminases - metabolism ; Purines - metabolism ; Pyrimidines - metabolism ; Salvage pathway</subject><ispartof>Biotechnology advances, 2024-12, Vol.77, p.108473, Article 108473</ispartof><rights>2024 The Authors</rights><rights>Copyright © 2024 The Authors. Published by Elsevier Inc. All rights reserved.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c299t-8d65a0e0f458fd05f5e12e009fc0c66779ed61ac8b959b5d31d8d7edc9729f073</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/39505057$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Del Arco, Jon</creatorcontrib><creatorcontrib>Acosta, Javier</creatorcontrib><creatorcontrib>Fernández-Lucas, Jesús</creatorcontrib><title>Biotechnological applications of purine and pyrimidine deaminases</title><title>Biotechnology advances</title><addtitle>Biotechnol Adv</addtitle><description>Deaminases, ubiquitous enzymes found in all living organisms from bacteria to humans, serve diverse and crucial functions. Notably, purine and pyrimidine deaminases, while biologically essential for regulating nucleotide pools, exhibit exceptional versatility in biotechnology. This review systematically consolidates current knowledge on deaminases, showcasing their potential uses and relevance in the field of biotechnology. Thus, their transformative impact on pharmaceutical manufacturing is highlighted as catalysts for the synthesis of nucleic acid derivatives. Additionally, the role of deaminases in food bioprocessing and production is also explored, particularly in purine content reduction and caffeine production, showcasing their versatility in this field. The review also delves into most promising biomedical applications including deaminase-based GDEPT and genome and transcriptome editing by deaminase-based systems. All in all, illustrated with practical examples, we underscore the role of purine and pyrimidine deaminases in advancing sustainable and efficient biotechnological practices. Finally, the review highlights future challenges and prospects in deaminase-based biotechnological processes, encompassing both industrial and medical perspectives.
•Purine and pyrimidine deaminases (DAs) are efficient and eco-friendly alternative to chemical synthetic processes.•Purine and pyrimidine DAs exhibit exceptional versatility, significantly impacting in pharma and food industries.•DAs are valuable tools in gene-directed enzyme prodrug therapy (GDEPT) and genome and transcriptome editing systems.</description><subject>Animals</subject><subject>Biocatalysis</subject><subject>Biotechnology</subject><subject>Biotechnology - methods</subject><subject>Deaminases</subject><subject>DNA and RNA editing</subject><subject>Gene Editing</subject><subject>Humans</subject><subject>Nucleic acid derivatives</subject><subject>Nucleotide Deaminases - genetics</subject><subject>Nucleotide Deaminases - metabolism</subject><subject>Purines - metabolism</subject><subject>Pyrimidines - metabolism</subject><subject>Salvage pathway</subject><issn>0734-9750</issn><issn>1873-1899</issn><issn>1873-1899</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><recordid>eNqFkMtOwzAQRS0EoqXwCyhLNinjJI7tZVvxkiqxgbXl2hNwlcYhTir173GVAktW89CduTOHkITCnAIt77fzjfM9mk9t9_MMsiK2RcHzMzKlgucpFVKekynwvEglZzAhVyFsASgDll-SSS5jAoxPyWI5Lmp87T-c0XWi27aOSe98ExJfJe3QuQYT3dikPXRu5-yxtKh3rtEBwzW5qHQd8OYUZ-T98eFt9ZyuX59eVot1ajIp-1TYkmlAqAomKgusYkgzBJCVAVOWnEu0JdVGbCSTG2ZzaoXlaI3kmaziJzNyN-5tO_81YOjVzgWDda0b9ENQOc1YIUoQLErFKDWdD6HDSrXxcN0dFAV1BKi26g-gOgJUI8A4entyGTY7tL-DP8SiYDkKMP66d9ipYBw2Bq3r0PTKeve_yze2hYdY</recordid><startdate>202412</startdate><enddate>202412</enddate><creator>Del Arco, Jon</creator><creator>Acosta, Javier</creator><creator>Fernández-Lucas, Jesús</creator><general>Elsevier Inc</general><scope>6I.</scope><scope>AAFTH</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>202412</creationdate><title>Biotechnological applications of purine and pyrimidine deaminases</title><author>Del Arco, Jon ; Acosta, Javier ; Fernández-Lucas, Jesús</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c299t-8d65a0e0f458fd05f5e12e009fc0c66779ed61ac8b959b5d31d8d7edc9729f073</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Animals</topic><topic>Biocatalysis</topic><topic>Biotechnology</topic><topic>Biotechnology - methods</topic><topic>Deaminases</topic><topic>DNA and RNA editing</topic><topic>Gene Editing</topic><topic>Humans</topic><topic>Nucleic acid derivatives</topic><topic>Nucleotide Deaminases - genetics</topic><topic>Nucleotide Deaminases - metabolism</topic><topic>Purines - metabolism</topic><topic>Pyrimidines - metabolism</topic><topic>Salvage pathway</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Del Arco, Jon</creatorcontrib><creatorcontrib>Acosta, Javier</creatorcontrib><creatorcontrib>Fernández-Lucas, Jesús</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Biotechnology advances</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Del Arco, Jon</au><au>Acosta, Javier</au><au>Fernández-Lucas, Jesús</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Biotechnological applications of purine and pyrimidine deaminases</atitle><jtitle>Biotechnology advances</jtitle><addtitle>Biotechnol Adv</addtitle><date>2024-12</date><risdate>2024</risdate><volume>77</volume><spage>108473</spage><pages>108473-</pages><artnum>108473</artnum><issn>0734-9750</issn><issn>1873-1899</issn><eissn>1873-1899</eissn><abstract>Deaminases, ubiquitous enzymes found in all living organisms from bacteria to humans, serve diverse and crucial functions. 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Finally, the review highlights future challenges and prospects in deaminase-based biotechnological processes, encompassing both industrial and medical perspectives.
•Purine and pyrimidine deaminases (DAs) are efficient and eco-friendly alternative to chemical synthetic processes.•Purine and pyrimidine DAs exhibit exceptional versatility, significantly impacting in pharma and food industries.•DAs are valuable tools in gene-directed enzyme prodrug therapy (GDEPT) and genome and transcriptome editing systems.</abstract><cop>England</cop><pub>Elsevier Inc</pub><pmid>39505057</pmid><doi>10.1016/j.biotechadv.2024.108473</doi><oa>free_for_read</oa></addata></record> |
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subjects | Animals Biocatalysis Biotechnology Biotechnology - methods Deaminases DNA and RNA editing Gene Editing Humans Nucleic acid derivatives Nucleotide Deaminases - genetics Nucleotide Deaminases - metabolism Purines - metabolism Pyrimidines - metabolism Salvage pathway |
title | Biotechnological applications of purine and pyrimidine deaminases |
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