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Ralstonia solanacearum differentially modulates soil physicochemical properties and rhizospheric bacteriome of resistant and susceptible tobacco cultivars
Ralstonia solanacearum is a devastating soilborne pathogen which poses significant yield and economic losses to tobacco production globally. The impact of R. solanacearum on rhizosphere bacteriome and soil physicochemical characteristics in resistant and susceptible tobacco cultivars is poorly under...
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Published in: | Microbiological research 2024-04, Vol.281, p.127604-127604, Article 127604 |
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creator | Ahmed, Waqar Dai, Zhenlin Zhang, Jinhao Shakeel, Qaiser Kamaruzzaman, Md Nosheen, Shaista Mohany, Mohamed Ahmed, Ayesha Cai, Shujing Wang, Yan Gao, Yongfeng Ahmad, Munir Munir, Shahzad Wang, Xinrong |
description | Ralstonia solanacearum is a devastating soilborne pathogen which poses significant yield and economic losses to tobacco production globally. The impact of R. solanacearum on rhizosphere bacteriome and soil physicochemical characteristics in resistant and susceptible tobacco cultivars is poorly understood. This study aims to determine the effect of R. solanacearum on soil physicochemical parameters and rhizosphere bacteriome of resistant (K326) and susceptible (Hongda) tobacco cultivars at various growth stages. Results demonstrated that the contents of available potassium and phosphorus, as well as soil pH were significantly increased in K326 soils (CK and T2) compared with Hongda (T1) after 21, 42, and 63 days post-inoculation (dpi) of R. solanacearum except for available nitrogen which showed an opposite trend. The qPCR results showed a significant decrease in R. solanacearum population in rhizosphere of K326 (T2) compared to the Hongda (T1) at 21 and 63 dpi than that after 42 dpi. The rhizosphere bacteriome analysis through 16S rRNA amplicon sequencing revealed that rhizosphere bacterial community composition was significantly different between two tobacco cultivars (Hongda and K326) and this effect was more prominent after 63 dpi (93 days after post-transplantation), suggesting that each cultivar recruits a unique set of bacterial communities. There was no obvious difference observed in the rhizosphere bacteriome of CK (K326) and T2 (K326), which might be attributed to the same genetic makeup and inherent resistance of K326 to bacterial wilt infection. Analysis of co-occurrence networks revealed that the microbial network in T1 (Hongda) was more complex than those in T2 (K326) and CK (K326), while the networks in CK and T2 were almost identical. The present research highlights the time-course relationship between environmental factors and rhizosphere bacteriome of tobacco cultivars showing different levels of resistance against R. solanacearum. Conclusively, studying the plant-soil-microbe interaction system in susceptible and resistant tobacco cultivars may enable us to develop effective integrated disease control plans for the healthy production of tobacco crops. |
doi_str_mv | 10.1016/j.micres.2024.127604 |
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The impact of R. solanacearum on rhizosphere bacteriome and soil physicochemical characteristics in resistant and susceptible tobacco cultivars is poorly understood. This study aims to determine the effect of R. solanacearum on soil physicochemical parameters and rhizosphere bacteriome of resistant (K326) and susceptible (Hongda) tobacco cultivars at various growth stages. Results demonstrated that the contents of available potassium and phosphorus, as well as soil pH were significantly increased in K326 soils (CK and T2) compared with Hongda (T1) after 21, 42, and 63 days post-inoculation (dpi) of R. solanacearum except for available nitrogen which showed an opposite trend. The qPCR results showed a significant decrease in R. solanacearum population in rhizosphere of K326 (T2) compared to the Hongda (T1) at 21 and 63 dpi than that after 42 dpi. The rhizosphere bacteriome analysis through 16S rRNA amplicon sequencing revealed that rhizosphere bacterial community composition was significantly different between two tobacco cultivars (Hongda and K326) and this effect was more prominent after 63 dpi (93 days after post-transplantation), suggesting that each cultivar recruits a unique set of bacterial communities. There was no obvious difference observed in the rhizosphere bacteriome of CK (K326) and T2 (K326), which might be attributed to the same genetic makeup and inherent resistance of K326 to bacterial wilt infection. Analysis of co-occurrence networks revealed that the microbial network in T1 (Hongda) was more complex than those in T2 (K326) and CK (K326), while the networks in CK and T2 were almost identical. The present research highlights the time-course relationship between environmental factors and rhizosphere bacteriome of tobacco cultivars showing different levels of resistance against R. solanacearum. Conclusively, studying the plant-soil-microbe interaction system in susceptible and resistant tobacco cultivars may enable us to develop effective integrated disease control plans for the healthy production of tobacco crops.</description><identifier>ISSN: 0944-5013</identifier><identifier>EISSN: 1618-0623</identifier><identifier>DOI: 10.1016/j.micres.2024.127604</identifier><identifier>PMID: 38280370</identifier><language>eng</language><publisher>Germany: Elsevier GmbH</publisher><subject>bacterial communities ; bacterial wilt ; Bacterial wilt disease ; bacteriome ; community structure ; cultivars ; disease control ; Disease incidence ; nitrogen ; pathogens ; phosphorus ; potassium ; Ralstonia solanacearum ; Resistant and susceptible cultivars ; rhizosphere ; Rhizosphere bacteriome ; soil pH ; Soil physicochemical properties ; tobacco</subject><ispartof>Microbiological research, 2024-04, Vol.281, p.127604-127604, Article 127604</ispartof><rights>2024 Elsevier GmbH</rights><rights>Copyright © 2024 Elsevier GmbH. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c395t-f360adee123e54a54ce2477c6b950afaf004743d5931ec3a50b864c3dcfc40133</citedby><cites>FETCH-LOGICAL-c395t-f360adee123e54a54ce2477c6b950afaf004743d5931ec3a50b864c3dcfc40133</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27901,27902</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/38280370$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Ahmed, Waqar</creatorcontrib><creatorcontrib>Dai, Zhenlin</creatorcontrib><creatorcontrib>Zhang, Jinhao</creatorcontrib><creatorcontrib>Shakeel, Qaiser</creatorcontrib><creatorcontrib>Kamaruzzaman, Md</creatorcontrib><creatorcontrib>Nosheen, Shaista</creatorcontrib><creatorcontrib>Mohany, Mohamed</creatorcontrib><creatorcontrib>Ahmed, Ayesha</creatorcontrib><creatorcontrib>Cai, Shujing</creatorcontrib><creatorcontrib>Wang, Yan</creatorcontrib><creatorcontrib>Gao, Yongfeng</creatorcontrib><creatorcontrib>Ahmad, Munir</creatorcontrib><creatorcontrib>Munir, Shahzad</creatorcontrib><creatorcontrib>Wang, Xinrong</creatorcontrib><title>Ralstonia solanacearum differentially modulates soil physicochemical properties and rhizospheric bacteriome of resistant and susceptible tobacco cultivars</title><title>Microbiological research</title><addtitle>Microbiol Res</addtitle><description>Ralstonia solanacearum is a devastating soilborne pathogen which poses significant yield and economic losses to tobacco production globally. The impact of R. solanacearum on rhizosphere bacteriome and soil physicochemical characteristics in resistant and susceptible tobacco cultivars is poorly understood. This study aims to determine the effect of R. solanacearum on soil physicochemical parameters and rhizosphere bacteriome of resistant (K326) and susceptible (Hongda) tobacco cultivars at various growth stages. Results demonstrated that the contents of available potassium and phosphorus, as well as soil pH were significantly increased in K326 soils (CK and T2) compared with Hongda (T1) after 21, 42, and 63 days post-inoculation (dpi) of R. solanacearum except for available nitrogen which showed an opposite trend. The qPCR results showed a significant decrease in R. solanacearum population in rhizosphere of K326 (T2) compared to the Hongda (T1) at 21 and 63 dpi than that after 42 dpi. The rhizosphere bacteriome analysis through 16S rRNA amplicon sequencing revealed that rhizosphere bacterial community composition was significantly different between two tobacco cultivars (Hongda and K326) and this effect was more prominent after 63 dpi (93 days after post-transplantation), suggesting that each cultivar recruits a unique set of bacterial communities. There was no obvious difference observed in the rhizosphere bacteriome of CK (K326) and T2 (K326), which might be attributed to the same genetic makeup and inherent resistance of K326 to bacterial wilt infection. Analysis of co-occurrence networks revealed that the microbial network in T1 (Hongda) was more complex than those in T2 (K326) and CK (K326), while the networks in CK and T2 were almost identical. The present research highlights the time-course relationship between environmental factors and rhizosphere bacteriome of tobacco cultivars showing different levels of resistance against R. solanacearum. Conclusively, studying the plant-soil-microbe interaction system in susceptible and resistant tobacco cultivars may enable us to develop effective integrated disease control plans for the healthy production of tobacco crops.</description><subject>bacterial communities</subject><subject>bacterial wilt</subject><subject>Bacterial wilt disease</subject><subject>bacteriome</subject><subject>community structure</subject><subject>cultivars</subject><subject>disease control</subject><subject>Disease incidence</subject><subject>nitrogen</subject><subject>pathogens</subject><subject>phosphorus</subject><subject>potassium</subject><subject>Ralstonia solanacearum</subject><subject>Resistant and susceptible cultivars</subject><subject>rhizosphere</subject><subject>Rhizosphere bacteriome</subject><subject>soil pH</subject><subject>Soil physicochemical properties</subject><subject>tobacco</subject><issn>0944-5013</issn><issn>1618-0623</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><recordid>eNqFkUtv1DAUhS1ERYcp_wAhL9lkuH7ktUFCVXlIlZBQu7acmxuNR0kcbKfS8FP4tbiksISVbfm7PsfnMPZawEGAqN6dDpPDQPEgQeqDkHUF-hnbiUo0BVRSPWc7aLUuShDqkr2M8QQgdNvIF-xSNbIBVcOO_fxmx5j87CyPfrSzRbJhnXjvhoECzcnZcTzzyffraBPFTLmRL8dzdOjxSNmDzefgFwrJ5Xs79zwc3Q8flyMFh7yzmPLGT8T9wLNhF5Od028wrhFpSa4biSefSfQc1zG5BxviFbsYsjl69bTu2f3Hm7vrz8Xt109frj_cFqjaMhWDqsD2REIqKrUtNZLUdY1V15ZgBzsA6FqrvmyVIFS2hK6pNKoeB9Q5G7Vnb7d38y--rxSTmVy2NeY0yK_RKFEq0UID8r-obGUtoZVZa8_0hmLwMQYazBLcZMPZCDCPBZqT2Qo0jwWarcA89uZJYe0m6v8O_WksA-83gHIkD46CiehoRupdIEym9-7fCr8ALOSzGw</recordid><startdate>202404</startdate><enddate>202404</enddate><creator>Ahmed, Waqar</creator><creator>Dai, Zhenlin</creator><creator>Zhang, Jinhao</creator><creator>Shakeel, Qaiser</creator><creator>Kamaruzzaman, Md</creator><creator>Nosheen, Shaista</creator><creator>Mohany, Mohamed</creator><creator>Ahmed, Ayesha</creator><creator>Cai, Shujing</creator><creator>Wang, Yan</creator><creator>Gao, Yongfeng</creator><creator>Ahmad, Munir</creator><creator>Munir, Shahzad</creator><creator>Wang, Xinrong</creator><general>Elsevier GmbH</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7S9</scope><scope>L.6</scope></search><sort><creationdate>202404</creationdate><title>Ralstonia solanacearum differentially modulates soil physicochemical properties and rhizospheric bacteriome of resistant and susceptible tobacco cultivars</title><author>Ahmed, Waqar ; Dai, Zhenlin ; Zhang, Jinhao ; Shakeel, Qaiser ; Kamaruzzaman, Md ; Nosheen, Shaista ; Mohany, Mohamed ; Ahmed, Ayesha ; Cai, Shujing ; Wang, Yan ; Gao, Yongfeng ; Ahmad, Munir ; Munir, Shahzad ; Wang, Xinrong</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c395t-f360adee123e54a54ce2477c6b950afaf004743d5931ec3a50b864c3dcfc40133</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>bacterial communities</topic><topic>bacterial wilt</topic><topic>Bacterial wilt disease</topic><topic>bacteriome</topic><topic>community structure</topic><topic>cultivars</topic><topic>disease control</topic><topic>Disease incidence</topic><topic>nitrogen</topic><topic>pathogens</topic><topic>phosphorus</topic><topic>potassium</topic><topic>Ralstonia solanacearum</topic><topic>Resistant and susceptible cultivars</topic><topic>rhizosphere</topic><topic>Rhizosphere bacteriome</topic><topic>soil pH</topic><topic>Soil physicochemical properties</topic><topic>tobacco</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ahmed, Waqar</creatorcontrib><creatorcontrib>Dai, Zhenlin</creatorcontrib><creatorcontrib>Zhang, Jinhao</creatorcontrib><creatorcontrib>Shakeel, Qaiser</creatorcontrib><creatorcontrib>Kamaruzzaman, Md</creatorcontrib><creatorcontrib>Nosheen, Shaista</creatorcontrib><creatorcontrib>Mohany, Mohamed</creatorcontrib><creatorcontrib>Ahmed, Ayesha</creatorcontrib><creatorcontrib>Cai, Shujing</creatorcontrib><creatorcontrib>Wang, Yan</creatorcontrib><creatorcontrib>Gao, Yongfeng</creatorcontrib><creatorcontrib>Ahmad, Munir</creatorcontrib><creatorcontrib>Munir, Shahzad</creatorcontrib><creatorcontrib>Wang, Xinrong</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>AGRICOLA</collection><collection>AGRICOLA - Academic</collection><jtitle>Microbiological research</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ahmed, Waqar</au><au>Dai, Zhenlin</au><au>Zhang, Jinhao</au><au>Shakeel, Qaiser</au><au>Kamaruzzaman, Md</au><au>Nosheen, Shaista</au><au>Mohany, Mohamed</au><au>Ahmed, Ayesha</au><au>Cai, Shujing</au><au>Wang, Yan</au><au>Gao, Yongfeng</au><au>Ahmad, Munir</au><au>Munir, Shahzad</au><au>Wang, Xinrong</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Ralstonia solanacearum differentially modulates soil physicochemical properties and rhizospheric bacteriome of resistant and susceptible tobacco cultivars</atitle><jtitle>Microbiological research</jtitle><addtitle>Microbiol Res</addtitle><date>2024-04</date><risdate>2024</risdate><volume>281</volume><spage>127604</spage><epage>127604</epage><pages>127604-127604</pages><artnum>127604</artnum><issn>0944-5013</issn><eissn>1618-0623</eissn><abstract>Ralstonia solanacearum is a devastating soilborne pathogen which poses significant yield and economic losses to tobacco production globally. The impact of R. solanacearum on rhizosphere bacteriome and soil physicochemical characteristics in resistant and susceptible tobacco cultivars is poorly understood. This study aims to determine the effect of R. solanacearum on soil physicochemical parameters and rhizosphere bacteriome of resistant (K326) and susceptible (Hongda) tobacco cultivars at various growth stages. Results demonstrated that the contents of available potassium and phosphorus, as well as soil pH were significantly increased in K326 soils (CK and T2) compared with Hongda (T1) after 21, 42, and 63 days post-inoculation (dpi) of R. solanacearum except for available nitrogen which showed an opposite trend. The qPCR results showed a significant decrease in R. solanacearum population in rhizosphere of K326 (T2) compared to the Hongda (T1) at 21 and 63 dpi than that after 42 dpi. The rhizosphere bacteriome analysis through 16S rRNA amplicon sequencing revealed that rhizosphere bacterial community composition was significantly different between two tobacco cultivars (Hongda and K326) and this effect was more prominent after 63 dpi (93 days after post-transplantation), suggesting that each cultivar recruits a unique set of bacterial communities. There was no obvious difference observed in the rhizosphere bacteriome of CK (K326) and T2 (K326), which might be attributed to the same genetic makeup and inherent resistance of K326 to bacterial wilt infection. Analysis of co-occurrence networks revealed that the microbial network in T1 (Hongda) was more complex than those in T2 (K326) and CK (K326), while the networks in CK and T2 were almost identical. The present research highlights the time-course relationship between environmental factors and rhizosphere bacteriome of tobacco cultivars showing different levels of resistance against R. solanacearum. Conclusively, studying the plant-soil-microbe interaction system in susceptible and resistant tobacco cultivars may enable us to develop effective integrated disease control plans for the healthy production of tobacco crops.</abstract><cop>Germany</cop><pub>Elsevier GmbH</pub><pmid>38280370</pmid><doi>10.1016/j.micres.2024.127604</doi><tpages>1</tpages></addata></record> |
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subjects | bacterial communities bacterial wilt Bacterial wilt disease bacteriome community structure cultivars disease control Disease incidence nitrogen pathogens phosphorus potassium Ralstonia solanacearum Resistant and susceptible cultivars rhizosphere Rhizosphere bacteriome soil pH Soil physicochemical properties tobacco |
title | Ralstonia solanacearum differentially modulates soil physicochemical properties and rhizospheric bacteriome of resistant and susceptible tobacco cultivars |
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