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16S rRNA gene sequence analysis of halophilic and halotolerant bacteria isolated from a hypersaline pond in Sichuan, China
One hundred and twenty bacterial isolates were obtained from a hypersaline pond (c. 22% salinity) in Sichuan, China. Bacteria were isolated from hypersaline water, sediment and soil samples using three culture media and an incubation temperature of 37°C. Of these isolates, 47 were selected and exami...
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Published in: | Annals of microbiology 2011-06, Vol.61 (2), p.375-381 |
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container_title | Annals of microbiology |
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creator | Tang, Jie Zheng, Ai-ping Bromfield, Eden S. P. Zhu, Jun Li, Shuang-cheng Wang, Shi-quan Deng, Qi-ming Li, Ping |
description | One hundred and twenty bacterial isolates were obtained from a hypersaline pond (c. 22% salinity) in Sichuan, China. Bacteria were isolated from hypersaline water, sediment and soil samples using three culture media and an incubation temperature of 37°C. Of these isolates, 47 were selected and examined by phylogenetic analysis of 16S rRNA gene sequences and by tests of salt tolerance. The phylogenetic analysis placed the 47 bacterial isolates either in the phylum
Firmicutes
or in the class
Gammaproteobacteria
and showed that they were affiliated with the genera
Salimicrobium
,
Halalkalibacillus
,
Virgibacillus
,
Alkalibacillus, Marinococcus
,
Halobacillus, Halomonas
,
Idiomarina
,
Chromohalobacter
and
Halovibrio
. All tested isolates were either halophilic or halotolerant and several were capable of growth in the presence of 30% (w/v) NaCl. |
doi_str_mv | 10.1007/s13213-010-0137-x |
format | article |
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Firmicutes
or in the class
Gammaproteobacteria
and showed that they were affiliated with the genera
Salimicrobium
,
Halalkalibacillus
,
Virgibacillus
,
Alkalibacillus, Marinococcus
,
Halobacillus, Halomonas
,
Idiomarina
,
Chromohalobacter
and
Halovibrio
. All tested isolates were either halophilic or halotolerant and several were capable of growth in the presence of 30% (w/v) NaCl.</description><identifier>ISSN: 1590-4261</identifier><identifier>EISSN: 1869-2044</identifier><identifier>DOI: 10.1007/s13213-010-0137-x</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer-Verlag</publisher><subject>Applied Microbiology ; Biological and medical sciences ; Biomedical and Life Sciences ; China ; Chromohalobacter ; class ; Fundamental and applied biological sciences. Psychology ; genes ; Halobacillus ; Halomonas ; hypersalinity ; Idiomarina ; Life Sciences ; Marinococcus ; Medical Microbiology ; Microbial Ecology ; Microbial Genetics and Genomics ; Microbiology ; Mycology ; nucleotide sequences ; phylogeny ; salt tolerance ; sediments ; sequence analysis ; Short Communication ; soil ; temperature ; Virgibacillus</subject><ispartof>Annals of microbiology, 2011-06, Vol.61 (2), p.375-381</ispartof><rights>Springer-Verlag and the University of Milan 2010</rights><rights>2015 INIST-CNRS</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c394t-2ba8dee55469243684962059f4fcde7875a14469575e34a91083fc27af92c7803</citedby><cites>FETCH-LOGICAL-c394t-2ba8dee55469243684962059f4fcde7875a14469575e34a91083fc27af92c7803</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27901,27902,36990</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=24185563$$DView record in Pascal Francis$$Hfree_for_read</backlink></links><search><creatorcontrib>Tang, Jie</creatorcontrib><creatorcontrib>Zheng, Ai-ping</creatorcontrib><creatorcontrib>Bromfield, Eden S. P.</creatorcontrib><creatorcontrib>Zhu, Jun</creatorcontrib><creatorcontrib>Li, Shuang-cheng</creatorcontrib><creatorcontrib>Wang, Shi-quan</creatorcontrib><creatorcontrib>Deng, Qi-ming</creatorcontrib><creatorcontrib>Li, Ping</creatorcontrib><title>16S rRNA gene sequence analysis of halophilic and halotolerant bacteria isolated from a hypersaline pond in Sichuan, China</title><title>Annals of microbiology</title><addtitle>Ann Microbiol</addtitle><description>One hundred and twenty bacterial isolates were obtained from a hypersaline pond (c. 22% salinity) in Sichuan, China. Bacteria were isolated from hypersaline water, sediment and soil samples using three culture media and an incubation temperature of 37°C. Of these isolates, 47 were selected and examined by phylogenetic analysis of 16S rRNA gene sequences and by tests of salt tolerance. The phylogenetic analysis placed the 47 bacterial isolates either in the phylum
Firmicutes
or in the class
Gammaproteobacteria
and showed that they were affiliated with the genera
Salimicrobium
,
Halalkalibacillus
,
Virgibacillus
,
Alkalibacillus, Marinococcus
,
Halobacillus, Halomonas
,
Idiomarina
,
Chromohalobacter
and
Halovibrio
. All tested isolates were either halophilic or halotolerant and several were capable of growth in the presence of 30% (w/v) NaCl.</description><subject>Applied Microbiology</subject><subject>Biological and medical sciences</subject><subject>Biomedical and Life Sciences</subject><subject>China</subject><subject>Chromohalobacter</subject><subject>class</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>genes</subject><subject>Halobacillus</subject><subject>Halomonas</subject><subject>hypersalinity</subject><subject>Idiomarina</subject><subject>Life Sciences</subject><subject>Marinococcus</subject><subject>Medical Microbiology</subject><subject>Microbial Ecology</subject><subject>Microbial Genetics and Genomics</subject><subject>Microbiology</subject><subject>Mycology</subject><subject>nucleotide sequences</subject><subject>phylogeny</subject><subject>salt tolerance</subject><subject>sediments</subject><subject>sequence analysis</subject><subject>Short Communication</subject><subject>soil</subject><subject>temperature</subject><subject>Virgibacillus</subject><issn>1590-4261</issn><issn>1869-2044</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2011</creationdate><recordtype>article</recordtype><recordid>eNp9kE1rFTEUhgdRsFZ_gLtsBBdOzfdMluVitVAUrK7Dae5JJyV3MubMhV5_vbne4tJFyMd53wfydN1bwS8E58NHEkoK1XPB21JD__isOxOjdb3kWj9vZ-N4r6UVL7tXRA-cW6edPut-C3vL6vevl-weZ2SEv_Y4B2QwQz5QIlYimyCXZUo5hfa8_XtdS8YK88ruIKxYE7BEJcOKWxZr2TFg02HBSpBToy6l1dLMblOY9jB_YJspzfC6exEhE7552s-7n1effmy-9DffPl9vLm_6oJxee3kH4xbRGG2d1MqO2lnJjYs6hi0O42BA6DYzg0GlwQk-qhjkANHJMIxcnXfvT9yllvY7Wv0uUcCcYcayJ6-EUVaPWqgWFadoqIWoYvRLTTuoBy-4P3r2J8--efZHz_6xdd494YEC5Ni0hET_ilKL0Rh7ZMtTjtpovsfqH8q-Ns30H_gfoMmNUw</recordid><startdate>20110601</startdate><enddate>20110601</enddate><creator>Tang, Jie</creator><creator>Zheng, Ai-ping</creator><creator>Bromfield, Eden S. P.</creator><creator>Zhu, Jun</creator><creator>Li, Shuang-cheng</creator><creator>Wang, Shi-quan</creator><creator>Deng, Qi-ming</creator><creator>Li, Ping</creator><general>Springer-Verlag</general><general>Springer</general><scope>IQODW</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7S9</scope><scope>L.6</scope></search><sort><creationdate>20110601</creationdate><title>16S rRNA gene sequence analysis of halophilic and halotolerant bacteria isolated from a hypersaline pond in Sichuan, China</title><author>Tang, Jie ; Zheng, Ai-ping ; Bromfield, Eden S. P. ; Zhu, Jun ; Li, Shuang-cheng ; Wang, Shi-quan ; Deng, Qi-ming ; Li, Ping</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c394t-2ba8dee55469243684962059f4fcde7875a14469575e34a91083fc27af92c7803</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2011</creationdate><topic>Applied Microbiology</topic><topic>Biological and medical sciences</topic><topic>Biomedical and Life Sciences</topic><topic>China</topic><topic>Chromohalobacter</topic><topic>class</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>genes</topic><topic>Halobacillus</topic><topic>Halomonas</topic><topic>hypersalinity</topic><topic>Idiomarina</topic><topic>Life Sciences</topic><topic>Marinococcus</topic><topic>Medical Microbiology</topic><topic>Microbial Ecology</topic><topic>Microbial Genetics and Genomics</topic><topic>Microbiology</topic><topic>Mycology</topic><topic>nucleotide sequences</topic><topic>phylogeny</topic><topic>salt tolerance</topic><topic>sediments</topic><topic>sequence analysis</topic><topic>Short Communication</topic><topic>soil</topic><topic>temperature</topic><topic>Virgibacillus</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Tang, Jie</creatorcontrib><creatorcontrib>Zheng, Ai-ping</creatorcontrib><creatorcontrib>Bromfield, Eden S. P.</creatorcontrib><creatorcontrib>Zhu, Jun</creatorcontrib><creatorcontrib>Li, Shuang-cheng</creatorcontrib><creatorcontrib>Wang, Shi-quan</creatorcontrib><creatorcontrib>Deng, Qi-ming</creatorcontrib><creatorcontrib>Li, Ping</creatorcontrib><collection>Pascal-Francis</collection><collection>CrossRef</collection><collection>AGRICOLA</collection><collection>AGRICOLA - Academic</collection><jtitle>Annals of microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Tang, Jie</au><au>Zheng, Ai-ping</au><au>Bromfield, Eden S. P.</au><au>Zhu, Jun</au><au>Li, Shuang-cheng</au><au>Wang, Shi-quan</au><au>Deng, Qi-ming</au><au>Li, Ping</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>16S rRNA gene sequence analysis of halophilic and halotolerant bacteria isolated from a hypersaline pond in Sichuan, China</atitle><jtitle>Annals of microbiology</jtitle><stitle>Ann Microbiol</stitle><date>2011-06-01</date><risdate>2011</risdate><volume>61</volume><issue>2</issue><spage>375</spage><epage>381</epage><pages>375-381</pages><issn>1590-4261</issn><eissn>1869-2044</eissn><abstract>One hundred and twenty bacterial isolates were obtained from a hypersaline pond (c. 22% salinity) in Sichuan, China. Bacteria were isolated from hypersaline water, sediment and soil samples using three culture media and an incubation temperature of 37°C. Of these isolates, 47 were selected and examined by phylogenetic analysis of 16S rRNA gene sequences and by tests of salt tolerance. The phylogenetic analysis placed the 47 bacterial isolates either in the phylum
Firmicutes
or in the class
Gammaproteobacteria
and showed that they were affiliated with the genera
Salimicrobium
,
Halalkalibacillus
,
Virgibacillus
,
Alkalibacillus, Marinococcus
,
Halobacillus, Halomonas
,
Idiomarina
,
Chromohalobacter
and
Halovibrio
. All tested isolates were either halophilic or halotolerant and several were capable of growth in the presence of 30% (w/v) NaCl.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer-Verlag</pub><doi>10.1007/s13213-010-0137-x</doi><tpages>7</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Applied Microbiology Biological and medical sciences Biomedical and Life Sciences China Chromohalobacter class Fundamental and applied biological sciences. Psychology genes Halobacillus Halomonas hypersalinity Idiomarina Life Sciences Marinococcus Medical Microbiology Microbial Ecology Microbial Genetics and Genomics Microbiology Mycology nucleotide sequences phylogeny salt tolerance sediments sequence analysis Short Communication soil temperature Virgibacillus |
title | 16S rRNA gene sequence analysis of halophilic and halotolerant bacteria isolated from a hypersaline pond in Sichuan, China |
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