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The cytochrome P450 subfamilies CYP392A and CYP392D are key players in acaricide metabolism in Tetranychusurticae
The spider mite Tetranychus urticae is a major agricultural pest with a global distribution, extremely diverse host range and a remarkable ability to develop resistance to a wide variety of acaricides. P450 mono‐oxygenases have been frequently associated with resistance development in this species....
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Published in: | Pesticide biochemistry and physiology 2024-09, Vol.204, p.106031, Article 106031 |
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creator | Tsakireli, Dimitra Vandenhole, Marilou Spiros A., Pergantis Riga, Maria Balabanidou, Vasilia De Rouck, Sander Ray, John Zimmer, Christoph Talmann, Lea Van Leeuwen, Thomas Vontas, John |
description | The spider mite Tetranychus urticae is a major agricultural pest with a global distribution, extremely diverse host range and a remarkable ability to develop resistance to a wide variety of acaricides. P450 mono‐oxygenases have been frequently associated with resistance development in this species. In particular enzymes of the CYP392A-subfamily were shown to metabolize a number of key acaricides, including abamectin, amitraz, fenpyroximate and the active metabolite of pyflubumide. However, transcriptomic studies comparing highly resistant and susceptible populations have often revealed high expression of members of the CYP392D-subfamily, but these have been only poorly studied. Here, we conducted a meta-analysis of gene expression data of 20 populations and identified two key enzymes of this family, CYP392D2 and CYP392D8, whose expression is associated with resistance. We subsequently functionally expressed these enzymes, together with CYP392A11 and CYP392A16 as known metabolizers, and compared their potential to accept a wide diversity of acaricides as substrate. This study overall confirms previous discovered substrates for CYP392A11 and CYP392A16, but also reveals unreported metabolic activity towards new acaricides. These include carbaryl, chlorpyrifos and etoxazole for CYP392A16 and carbaryl, chlorpyrifos and NNI-0711-NH pyflubumide for CYP392A11. For the newly studied CYP392D-family, we show that CYP392D2 metabolizes pyridaben, fenpyroximate, etoxazole and chlorpyrifos, while CYP392D8 metabolizes carbaryl, fenazaquin and tebufenpyrad. Last, we observed that both CYP392A- and CYP392D-subfamily enzymes activate chlorpyrifos to its corresponding oxon. Our study indicates that there is both overlap and specificity in the activity of A- and D-subfamily enzymes against acaricides and model substrates. With the recent advent of highly efficient CRISPR/Cas9 gene editing protocols in T. urticae, the way is now paved to conduct further genetic experiments revealing and quantifying the role of these enzymes in the resistance phenotype in field populations.
[Display omitted]
•Gene expression analysis of 20 resistant and susceptible T. urticae populations.•CYP392D2 and CYP392D8 are associated with resistance.•Both D-family members show metabolic activity to various but distinct acaricides.•Functional expression reveals substrate specificity in A- and D-subfamily enzymes.•Overlap is observed between substrates of CYP392A11 and CYP392A16. |
doi_str_mv | 10.1016/j.pestbp.2024.106031 |
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[Display omitted]
•Gene expression analysis of 20 resistant and susceptible T. urticae populations.•CYP392D2 and CYP392D8 are associated with resistance.•Both D-family members show metabolic activity to various but distinct acaricides.•Functional expression reveals substrate specificity in A- and D-subfamily enzymes.•Overlap is observed between substrates of CYP392A11 and CYP392A16.</description><identifier>ISSN: 0048-3575</identifier><identifier>ISSN: 1095-9939</identifier><identifier>EISSN: 1095-9939</identifier><identifier>DOI: 10.1016/j.pestbp.2024.106031</identifier><identifier>PMID: 39277360</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>abamectin ; Acaricide resistance ; Acaricides - metabolism ; Acaricides - pharmacology ; Adaptation ; amitraz ; Animals ; biochemical pathways ; carbaryl ; chlorpyrifos ; CRISPR-Cas systems ; cytochrome P-450 ; Cytochrome P-450 Enzyme System - genetics ; Cytochrome P-450 Enzyme System - metabolism ; Detoxification ; etoxazole ; family ; fenpyroximate ; gene expression ; genes ; geographical distribution ; host range ; meta-analysis ; metabolism ; metabolites ; Mono‑oxygenase ; pests ; phenotype ; pyridaben ; species ; Substrate specificity ; Tetranychidae - drug effects ; Tetranychidae - enzymology ; Tetranychidae - genetics ; Tetranychidae - metabolism ; Tetranychus urticae ; transcriptomics</subject><ispartof>Pesticide biochemistry and physiology, 2024-09, Vol.204, p.106031, Article 106031</ispartof><rights>2024 Elsevier Inc.</rights><rights>Copyright © 2024 Elsevier Inc. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27901,27902</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/39277360$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Tsakireli, Dimitra</creatorcontrib><creatorcontrib>Vandenhole, Marilou</creatorcontrib><creatorcontrib>Spiros A., Pergantis</creatorcontrib><creatorcontrib>Riga, Maria</creatorcontrib><creatorcontrib>Balabanidou, Vasilia</creatorcontrib><creatorcontrib>De Rouck, Sander</creatorcontrib><creatorcontrib>Ray, John</creatorcontrib><creatorcontrib>Zimmer, Christoph</creatorcontrib><creatorcontrib>Talmann, Lea</creatorcontrib><creatorcontrib>Van Leeuwen, Thomas</creatorcontrib><creatorcontrib>Vontas, John</creatorcontrib><title>The cytochrome P450 subfamilies CYP392A and CYP392D are key players in acaricide metabolism in Tetranychusurticae</title><title>Pesticide biochemistry and physiology</title><addtitle>Pestic Biochem Physiol</addtitle><description>The spider mite Tetranychus urticae is a major agricultural pest with a global distribution, extremely diverse host range and a remarkable ability to develop resistance to a wide variety of acaricides. P450 mono‐oxygenases have been frequently associated with resistance development in this species. In particular enzymes of the CYP392A-subfamily were shown to metabolize a number of key acaricides, including abamectin, amitraz, fenpyroximate and the active metabolite of pyflubumide. However, transcriptomic studies comparing highly resistant and susceptible populations have often revealed high expression of members of the CYP392D-subfamily, but these have been only poorly studied. Here, we conducted a meta-analysis of gene expression data of 20 populations and identified two key enzymes of this family, CYP392D2 and CYP392D8, whose expression is associated with resistance. We subsequently functionally expressed these enzymes, together with CYP392A11 and CYP392A16 as known metabolizers, and compared their potential to accept a wide diversity of acaricides as substrate. This study overall confirms previous discovered substrates for CYP392A11 and CYP392A16, but also reveals unreported metabolic activity towards new acaricides. These include carbaryl, chlorpyrifos and etoxazole for CYP392A16 and carbaryl, chlorpyrifos and NNI-0711-NH pyflubumide for CYP392A11. For the newly studied CYP392D-family, we show that CYP392D2 metabolizes pyridaben, fenpyroximate, etoxazole and chlorpyrifos, while CYP392D8 metabolizes carbaryl, fenazaquin and tebufenpyrad. Last, we observed that both CYP392A- and CYP392D-subfamily enzymes activate chlorpyrifos to its corresponding oxon. Our study indicates that there is both overlap and specificity in the activity of A- and D-subfamily enzymes against acaricides and model substrates. With the recent advent of highly efficient CRISPR/Cas9 gene editing protocols in T. urticae, the way is now paved to conduct further genetic experiments revealing and quantifying the role of these enzymes in the resistance phenotype in field populations.
[Display omitted]
•Gene expression analysis of 20 resistant and susceptible T. urticae populations.•CYP392D2 and CYP392D8 are associated with resistance.•Both D-family members show metabolic activity to various but distinct acaricides.•Functional expression reveals substrate specificity in A- and D-subfamily enzymes.•Overlap is observed between substrates of CYP392A11 and CYP392A16.</description><subject>abamectin</subject><subject>Acaricide resistance</subject><subject>Acaricides - metabolism</subject><subject>Acaricides - pharmacology</subject><subject>Adaptation</subject><subject>amitraz</subject><subject>Animals</subject><subject>biochemical pathways</subject><subject>carbaryl</subject><subject>chlorpyrifos</subject><subject>CRISPR-Cas systems</subject><subject>cytochrome P-450</subject><subject>Cytochrome P-450 Enzyme System - genetics</subject><subject>Cytochrome P-450 Enzyme System - metabolism</subject><subject>Detoxification</subject><subject>etoxazole</subject><subject>family</subject><subject>fenpyroximate</subject><subject>gene expression</subject><subject>genes</subject><subject>geographical distribution</subject><subject>host range</subject><subject>meta-analysis</subject><subject>metabolism</subject><subject>metabolites</subject><subject>Mono‑oxygenase</subject><subject>pests</subject><subject>phenotype</subject><subject>pyridaben</subject><subject>species</subject><subject>Substrate specificity</subject><subject>Tetranychidae - drug effects</subject><subject>Tetranychidae - enzymology</subject><subject>Tetranychidae - genetics</subject><subject>Tetranychidae - metabolism</subject><subject>Tetranychus urticae</subject><subject>transcriptomics</subject><issn>0048-3575</issn><issn>1095-9939</issn><issn>1095-9939</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><recordid>eNqNkU1LxDAQhoMo7vrxD0Ry9NJ10iRtcxFk_QTBPawHTyFNp2zWfpm0Qv-9XXa9e5qZl4eBmYeQKwYLBiy53S46DH3eLWKIxRQlwNkRmTNQMlKKq2MyBxBZxGUqZ-QshC0AKAHqlMy4itOUJzAn3-sNUjv2rd34tka6EhJoGPLS1K5yGOjyczXR99Q0xaF_oMYj_cKRdpUZ0QfqGmqs8c66AmmNvcnbyoV6l6-x96YZ7WYIg--dNXhBTkpTBbw81HPy8fS4Xr5Eb-_Pr8v7twiZEBAlCZY2tbYs0CjkqhS5hbxMwRRymrjISgE8wzSWscymgMU5s0zmseGSlYKfk5v93s6338P0Kl27YLGqTIPtEDRnkidpIrP0HyhIoYBlMKHXB3TIayx0511t_Kj_PjoBd3sAp9t-HHodrMPGYuE82l4XrdMM9E6h3uq9Qr1TqPcK-S-tLo3Y</recordid><startdate>202409</startdate><enddate>202409</enddate><creator>Tsakireli, Dimitra</creator><creator>Vandenhole, Marilou</creator><creator>Spiros A., Pergantis</creator><creator>Riga, Maria</creator><creator>Balabanidou, Vasilia</creator><creator>De Rouck, Sander</creator><creator>Ray, John</creator><creator>Zimmer, Christoph</creator><creator>Talmann, Lea</creator><creator>Van Leeuwen, Thomas</creator><creator>Vontas, John</creator><general>Elsevier Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>7X8</scope><scope>7S9</scope><scope>L.6</scope></search><sort><creationdate>202409</creationdate><title>The cytochrome P450 subfamilies CYP392A and CYP392D are key players in acaricide metabolism in Tetranychusurticae</title><author>Tsakireli, Dimitra ; Vandenhole, Marilou ; Spiros A., Pergantis ; Riga, Maria ; Balabanidou, Vasilia ; De Rouck, Sander ; Ray, John ; Zimmer, Christoph ; Talmann, Lea ; Van Leeuwen, Thomas ; Vontas, John</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-e1440-66efc7ccfdea9e39f4bc0bf70ad539f348f4038e7252589f312b1c15b2a351f43</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>abamectin</topic><topic>Acaricide resistance</topic><topic>Acaricides - metabolism</topic><topic>Acaricides - pharmacology</topic><topic>Adaptation</topic><topic>amitraz</topic><topic>Animals</topic><topic>biochemical pathways</topic><topic>carbaryl</topic><topic>chlorpyrifos</topic><topic>CRISPR-Cas systems</topic><topic>cytochrome P-450</topic><topic>Cytochrome P-450 Enzyme System - genetics</topic><topic>Cytochrome P-450 Enzyme System - metabolism</topic><topic>Detoxification</topic><topic>etoxazole</topic><topic>family</topic><topic>fenpyroximate</topic><topic>gene expression</topic><topic>genes</topic><topic>geographical distribution</topic><topic>host range</topic><topic>meta-analysis</topic><topic>metabolism</topic><topic>metabolites</topic><topic>Mono‑oxygenase</topic><topic>pests</topic><topic>phenotype</topic><topic>pyridaben</topic><topic>species</topic><topic>Substrate specificity</topic><topic>Tetranychidae - drug effects</topic><topic>Tetranychidae - enzymology</topic><topic>Tetranychidae - genetics</topic><topic>Tetranychidae - metabolism</topic><topic>Tetranychus urticae</topic><topic>transcriptomics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Tsakireli, Dimitra</creatorcontrib><creatorcontrib>Vandenhole, Marilou</creatorcontrib><creatorcontrib>Spiros A., Pergantis</creatorcontrib><creatorcontrib>Riga, Maria</creatorcontrib><creatorcontrib>Balabanidou, Vasilia</creatorcontrib><creatorcontrib>De Rouck, Sander</creatorcontrib><creatorcontrib>Ray, John</creatorcontrib><creatorcontrib>Zimmer, Christoph</creatorcontrib><creatorcontrib>Talmann, Lea</creatorcontrib><creatorcontrib>Van Leeuwen, Thomas</creatorcontrib><creatorcontrib>Vontas, John</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>MEDLINE - Academic</collection><collection>AGRICOLA</collection><collection>AGRICOLA - Academic</collection><jtitle>Pesticide biochemistry and physiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Tsakireli, Dimitra</au><au>Vandenhole, Marilou</au><au>Spiros A., Pergantis</au><au>Riga, Maria</au><au>Balabanidou, Vasilia</au><au>De Rouck, Sander</au><au>Ray, John</au><au>Zimmer, Christoph</au><au>Talmann, Lea</au><au>Van Leeuwen, Thomas</au><au>Vontas, John</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The cytochrome P450 subfamilies CYP392A and CYP392D are key players in acaricide metabolism in Tetranychusurticae</atitle><jtitle>Pesticide biochemistry and physiology</jtitle><addtitle>Pestic Biochem Physiol</addtitle><date>2024-09</date><risdate>2024</risdate><volume>204</volume><spage>106031</spage><pages>106031-</pages><artnum>106031</artnum><issn>0048-3575</issn><issn>1095-9939</issn><eissn>1095-9939</eissn><abstract>The spider mite Tetranychus urticae is a major agricultural pest with a global distribution, extremely diverse host range and a remarkable ability to develop resistance to a wide variety of acaricides. P450 mono‐oxygenases have been frequently associated with resistance development in this species. In particular enzymes of the CYP392A-subfamily were shown to metabolize a number of key acaricides, including abamectin, amitraz, fenpyroximate and the active metabolite of pyflubumide. However, transcriptomic studies comparing highly resistant and susceptible populations have often revealed high expression of members of the CYP392D-subfamily, but these have been only poorly studied. Here, we conducted a meta-analysis of gene expression data of 20 populations and identified two key enzymes of this family, CYP392D2 and CYP392D8, whose expression is associated with resistance. We subsequently functionally expressed these enzymes, together with CYP392A11 and CYP392A16 as known metabolizers, and compared their potential to accept a wide diversity of acaricides as substrate. This study overall confirms previous discovered substrates for CYP392A11 and CYP392A16, but also reveals unreported metabolic activity towards new acaricides. These include carbaryl, chlorpyrifos and etoxazole for CYP392A16 and carbaryl, chlorpyrifos and NNI-0711-NH pyflubumide for CYP392A11. For the newly studied CYP392D-family, we show that CYP392D2 metabolizes pyridaben, fenpyroximate, etoxazole and chlorpyrifos, while CYP392D8 metabolizes carbaryl, fenazaquin and tebufenpyrad. Last, we observed that both CYP392A- and CYP392D-subfamily enzymes activate chlorpyrifos to its corresponding oxon. Our study indicates that there is both overlap and specificity in the activity of A- and D-subfamily enzymes against acaricides and model substrates. With the recent advent of highly efficient CRISPR/Cas9 gene editing protocols in T. urticae, the way is now paved to conduct further genetic experiments revealing and quantifying the role of these enzymes in the resistance phenotype in field populations.
[Display omitted]
•Gene expression analysis of 20 resistant and susceptible T. urticae populations.•CYP392D2 and CYP392D8 are associated with resistance.•Both D-family members show metabolic activity to various but distinct acaricides.•Functional expression reveals substrate specificity in A- and D-subfamily enzymes.•Overlap is observed between substrates of CYP392A11 and CYP392A16.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>39277360</pmid><doi>10.1016/j.pestbp.2024.106031</doi></addata></record> |
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subjects | abamectin Acaricide resistance Acaricides - metabolism Acaricides - pharmacology Adaptation amitraz Animals biochemical pathways carbaryl chlorpyrifos CRISPR-Cas systems cytochrome P-450 Cytochrome P-450 Enzyme System - genetics Cytochrome P-450 Enzyme System - metabolism Detoxification etoxazole family fenpyroximate gene expression genes geographical distribution host range meta-analysis metabolism metabolites Mono‑oxygenase pests phenotype pyridaben species Substrate specificity Tetranychidae - drug effects Tetranychidae - enzymology Tetranychidae - genetics Tetranychidae - metabolism Tetranychus urticae transcriptomics |
title | The cytochrome P450 subfamilies CYP392A and CYP392D are key players in acaricide metabolism in Tetranychusurticae |
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