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Engineered Bimetallic MOF-Crafted Bullet Aids in Penetrating Serum Metabolic Traits of Chronic Obstructive Pulmonary Disease
Metabolomics analysis based on body fluids, combined with high-throughput laser desorption and ionization mass spectrometry (LDI-MS), holds great potential and promising prospects for disease diagnosis and screening. On the other hand, chronic obstructive pulmonary disease (COPD) currently lacks inn...
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Published in: | Analytical chemistry (Washington) 2024-09, Vol.96 (36), p.14688-14696 |
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description | Metabolomics analysis based on body fluids, combined with high-throughput laser desorption and ionization mass spectrometry (LDI-MS), holds great potential and promising prospects for disease diagnosis and screening. On the other hand, chronic obstructive pulmonary disease (COPD) currently lacks innovative and powerful diagnostic and screening methods. In this work, CoFeNMOF-D, a metal–organic framework (MOF)-derived metal oxide nanomaterial, was synthesized and utilized as a matrix to assist LDI-MS for extracting serum metabolic fingerprints of COPD patients and healthy controls (HC). Through machine learning algorithms, successful discrimination between the COPD and HC was achieved. Furthermore, four potential biomarkers significantly downregulated in COPD were screened out. The disease diagnostic models based on the biomarkers demonstrated excellent diagnostic performance across different algorithms, with area under the curve (AUC) values reaching 0.931 and 0.978 in the training and validation sets, respectively. Finally, the potential metabolic pathways and disease mechanisms associated with the identified markers were explored. This work advances the application of LDI-based molecular diagnostics in clinical settings. |
doi_str_mv | 10.1021/acs.analchem.4c03681 |
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On the other hand, chronic obstructive pulmonary disease (COPD) currently lacks innovative and powerful diagnostic and screening methods. In this work, CoFeNMOF-D, a metal–organic framework (MOF)-derived metal oxide nanomaterial, was synthesized and utilized as a matrix to assist LDI-MS for extracting serum metabolic fingerprints of COPD patients and healthy controls (HC). Through machine learning algorithms, successful discrimination between the COPD and HC was achieved. Furthermore, four potential biomarkers significantly downregulated in COPD were screened out. The disease diagnostic models based on the biomarkers demonstrated excellent diagnostic performance across different algorithms, with area under the curve (AUC) values reaching 0.931 and 0.978 in the training and validation sets, respectively. Finally, the potential metabolic pathways and disease mechanisms associated with the identified markers were explored. 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Chem</addtitle><description>Metabolomics analysis based on body fluids, combined with high-throughput laser desorption and ionization mass spectrometry (LDI-MS), holds great potential and promising prospects for disease diagnosis and screening. On the other hand, chronic obstructive pulmonary disease (COPD) currently lacks innovative and powerful diagnostic and screening methods. In this work, CoFeNMOF-D, a metal–organic framework (MOF)-derived metal oxide nanomaterial, was synthesized and utilized as a matrix to assist LDI-MS for extracting serum metabolic fingerprints of COPD patients and healthy controls (HC). Through machine learning algorithms, successful discrimination between the COPD and HC was achieved. Furthermore, four potential biomarkers significantly downregulated in COPD were screened out. The disease diagnostic models based on the biomarkers demonstrated excellent diagnostic performance across different algorithms, with area under the curve (AUC) values reaching 0.931 and 0.978 in the training and validation sets, respectively. Finally, the potential metabolic pathways and disease mechanisms associated with the identified markers were explored. 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Yan, Yinghua ; Deng, Chunhui ; Sun, Nianrong</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a288t-a4ac5fd2777f3ecc2ec73c292a57fa9cc9d29de95b1cdfeb66178ffd5a16ee373</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Aged</topic><topic>Algorithms</topic><topic>analytical chemistry</topic><topic>Bimetals</topic><topic>Biomarkers</topic><topic>Biomarkers - blood</topic><topic>blood serum</topic><topic>Body fluids</topic><topic>Chronic obstructive pulmonary disease</topic><topic>coordination polymers</topic><topic>desorption</topic><topic>diagnostic techniques</topic><topic>disease diagnosis</topic><topic>Female</topic><topic>Humans</topic><topic>Ionization</topic><topic>Lung diseases</topic><topic>Machine Learning</topic><topic>Male</topic><topic>Mass spectrometry</topic><topic>Mass spectroscopy</topic><topic>Metabolic pathways</topic><topic>Metabolism</topic><topic>Metabolomics</topic><topic>Metal oxides</topic><topic>Metal-organic frameworks</topic><topic>Metal-Organic Frameworks - chemistry</topic><topic>Middle Aged</topic><topic>Nanomaterials</topic><topic>Pulmonary Disease, Chronic Obstructive - blood</topic><topic>respiratory tract diseases</topic><topic>Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lin, Hairu</creatorcontrib><creatorcontrib>Yan, Yinghua</creatorcontrib><creatorcontrib>Deng, Chunhui</creatorcontrib><creatorcontrib>Sun, Nianrong</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Aluminium Industry Abstracts</collection><collection>Biotechnology Research Abstracts</collection><collection>Ceramic Abstracts</collection><collection>Computer and Information Systems Abstracts</collection><collection>Corrosion Abstracts</collection><collection>Electronics & Communications Abstracts</collection><collection>Engineered Materials Abstracts</collection><collection>Materials Business File</collection><collection>Mechanical & Transportation Engineering Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>Toxicology Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>METADEX</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ANTE: Abstracts in New Technology & Engineering</collection><collection>Engineering Research Database</collection><collection>Aerospace Database</collection><collection>Copper Technical Reference Library</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Materials Research Database</collection><collection>ProQuest Computer Science Collection</collection><collection>Civil Engineering Abstracts</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>Computer and Information Systems Abstracts Academic</collection><collection>Computer and Information Systems Abstracts Professional</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>MEDLINE - Academic</collection><collection>AGRICOLA</collection><collection>AGRICOLA - Academic</collection><jtitle>Analytical chemistry (Washington)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lin, Hairu</au><au>Yan, Yinghua</au><au>Deng, Chunhui</au><au>Sun, Nianrong</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Engineered Bimetallic MOF-Crafted Bullet Aids in Penetrating Serum Metabolic Traits of Chronic Obstructive Pulmonary Disease</atitle><jtitle>Analytical chemistry (Washington)</jtitle><addtitle>Anal. 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Furthermore, four potential biomarkers significantly downregulated in COPD were screened out. The disease diagnostic models based on the biomarkers demonstrated excellent diagnostic performance across different algorithms, with area under the curve (AUC) values reaching 0.931 and 0.978 in the training and validation sets, respectively. Finally, the potential metabolic pathways and disease mechanisms associated with the identified markers were explored. This work advances the application of LDI-based molecular diagnostics in clinical settings.</abstract><cop>United States</cop><pub>American Chemical Society</pub><pmid>39208069</pmid><doi>10.1021/acs.analchem.4c03681</doi><tpages>9</tpages><orcidid>https://orcid.org/0000-0003-1511-7116</orcidid><orcidid>https://orcid.org/0000-0002-0569-2881</orcidid><orcidid>https://orcid.org/0000-0002-8704-7543</orcidid></addata></record> |
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subjects | Aged Algorithms analytical chemistry Bimetals Biomarkers Biomarkers - blood blood serum Body fluids Chronic obstructive pulmonary disease coordination polymers desorption diagnostic techniques disease diagnosis Female Humans Ionization Lung diseases Machine Learning Male Mass spectrometry Mass spectroscopy Metabolic pathways Metabolism Metabolomics Metal oxides Metal-organic frameworks Metal-Organic Frameworks - chemistry Middle Aged Nanomaterials Pulmonary Disease, Chronic Obstructive - blood respiratory tract diseases Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization |
title | Engineered Bimetallic MOF-Crafted Bullet Aids in Penetrating Serum Metabolic Traits of Chronic Obstructive Pulmonary Disease |
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