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Associations of polymorphisms in the Pit-1 gene with growth and carcass traits in Angus beef cattle
The Pit-1 gene was studied as a candidate for genetic markers of growth and carcass traits. Angus beef cattle that were divergently selected for high- or low-blood serum IGF-I concentration were used in this study. The single-strand conformation polymorphism method was used to identify polymorphism...
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Published in: | Journal of animal science 2004-08, Vol.82 (8), p.2229-2233 |
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creator | Zhao, Q Davis, M.E Hines, H.C |
description | The Pit-1 gene was studied as a candidate for genetic markers of growth and carcass traits. Angus beef cattle that were divergently selected for high- or low-blood serum IGF-I concentration were used in this study. The single-strand conformation polymorphism method was used to identify polymorphism in the Pit-1 gene including regions from intron 2 to exon 6. Two polymorphisms, Pit1I3H (HinfI) and Pit1I3NL (NlaIII), were detected in intron 3 of the Pit-1 gene. One polymorphism, Pit1I4N (BstNI), was found in intron 4, and a single nucleotide polymorphism, Pit1I5, was found in intron 5. The previously reported polymorphism in exon 6, Pit1E6H (HinfI), was also studied in 416 Angus beef cattle. Associations of the polymorphisms with growth traits, carcass traits, and IGF-I concentration were analyzed using a general linear model procedure. No significant associations were observed between these polymorphisms and growth and carcass traits. |
doi_str_mv | 10.2527/2004.8282229x |
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Angus beef cattle that were divergently selected for high- or low-blood serum IGF-I concentration were used in this study. The single-strand conformation polymorphism method was used to identify polymorphism in the Pit-1 gene including regions from intron 2 to exon 6. Two polymorphisms, Pit1I3H (HinfI) and Pit1I3NL (NlaIII), were detected in intron 3 of the Pit-1 gene. One polymorphism, Pit1I4N (BstNI), was found in intron 4, and a single nucleotide polymorphism, Pit1I5, was found in intron 5. The previously reported polymorphism in exon 6, Pit1E6H (HinfI), was also studied in 416 Angus beef cattle. Associations of the polymorphisms with growth traits, carcass traits, and IGF-I concentration were analyzed using a general linear model procedure. No significant associations were observed between these polymorphisms and growth and carcass traits.</description><identifier>ISSN: 0021-8812</identifier><identifier>EISSN: 1525-3163</identifier><identifier>DOI: 10.2527/2004.8282229x</identifier><identifier>PMID: 15318718</identifier><language>eng</language><publisher>Savoy, IL: Am Soc Animal Sci</publisher><subject>Angus ; animal genetics ; animal growth ; Animal productions ; Animals ; beef cattle ; beef quality ; biochemical polymorphism ; Biological and medical sciences ; Body Composition - genetics ; Bos ; carcass characteristics ; Cattle - genetics ; Cattle - growth & development ; DNA-Binding Proteins - genetics ; Exons ; Female ; Food industries ; Fundamental and applied biological sciences. Psychology ; Genetic Linkage ; Genetic Markers ; genetic variation ; genotype ; growth traits ; insulin-like growth factor I ; Insulin-Like Growth Factor I - analysis ; Insulin-Like Growth Factor I - genetics ; Introns ; Linear Models ; Male ; Meat and meat product industries ; molecular sequence data ; Pit-1 gene ; Polymorphism, Single-Stranded Conformational ; Quantitative Trait, Heritable ; Random Allocation ; Selection, Genetic ; sequence analysis ; single-stranded conformational polymorphism ; Terrestrial animal productions ; Transcription Factor Pit-1 ; Transcription Factors - genetics ; Vertebrates</subject><ispartof>Journal of animal science, 2004-08, Vol.82 (8), p.2229-2233</ispartof><rights>2004 INIST-CNRS</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27901,27902</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=15964019$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/15318718$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Zhao, Q</creatorcontrib><creatorcontrib>Davis, M.E</creatorcontrib><creatorcontrib>Hines, H.C</creatorcontrib><title>Associations of polymorphisms in the Pit-1 gene with growth and carcass traits in Angus beef cattle</title><title>Journal of animal science</title><addtitle>J Anim Sci</addtitle><description>The Pit-1 gene was studied as a candidate for genetic markers of growth and carcass traits. Angus beef cattle that were divergently selected for high- or low-blood serum IGF-I concentration were used in this study. The single-strand conformation polymorphism method was used to identify polymorphism in the Pit-1 gene including regions from intron 2 to exon 6. Two polymorphisms, Pit1I3H (HinfI) and Pit1I3NL (NlaIII), were detected in intron 3 of the Pit-1 gene. One polymorphism, Pit1I4N (BstNI), was found in intron 4, and a single nucleotide polymorphism, Pit1I5, was found in intron 5. The previously reported polymorphism in exon 6, Pit1E6H (HinfI), was also studied in 416 Angus beef cattle. Associations of the polymorphisms with growth traits, carcass traits, and IGF-I concentration were analyzed using a general linear model procedure. No significant associations were observed between these polymorphisms and growth and carcass traits.</description><subject>Angus</subject><subject>animal genetics</subject><subject>animal growth</subject><subject>Animal productions</subject><subject>Animals</subject><subject>beef cattle</subject><subject>beef quality</subject><subject>biochemical polymorphism</subject><subject>Biological and medical sciences</subject><subject>Body Composition - genetics</subject><subject>Bos</subject><subject>carcass characteristics</subject><subject>Cattle - genetics</subject><subject>Cattle - growth & development</subject><subject>DNA-Binding Proteins - genetics</subject><subject>Exons</subject><subject>Female</subject><subject>Food industries</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Genetic Linkage</subject><subject>Genetic Markers</subject><subject>genetic variation</subject><subject>genotype</subject><subject>growth traits</subject><subject>insulin-like growth factor I</subject><subject>Insulin-Like Growth Factor I - analysis</subject><subject>Insulin-Like Growth Factor I - genetics</subject><subject>Introns</subject><subject>Linear Models</subject><subject>Male</subject><subject>Meat and meat product industries</subject><subject>molecular sequence data</subject><subject>Pit-1 gene</subject><subject>Polymorphism, Single-Stranded Conformational</subject><subject>Quantitative Trait, Heritable</subject><subject>Random Allocation</subject><subject>Selection, Genetic</subject><subject>sequence analysis</subject><subject>single-stranded conformational polymorphism</subject><subject>Terrestrial animal productions</subject><subject>Transcription Factor Pit-1</subject><subject>Transcription Factors - genetics</subject><subject>Vertebrates</subject><issn>0021-8812</issn><issn>1525-3163</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2004</creationdate><recordtype>article</recordtype><recordid>eNqFkc1v1DAQxS0EotvCkSv4ArcUf8SxfVxVhSJVAqn0bDnOOHGVxIvt1dL_vqZdBLee3mF-897oDULvKDlngsnPjJD2XDHFGNO_X6ANFUw0nHb8JdoQwmijFGUn6DTnO0IoE1q8RidUcKokVRvktjlHF2wJcc04eryL8_0S024Keck4rLhMgH-E0lA8wgr4EMqExxQPVew6YGeTsznjkmwojwvbddxn3AP4OixlhjfolbdzhrdHPUO3Xy5_Xlw119-_frvYXjeeM14DtNQe-s4D9VLX-4APetBOgLcOmOM976WjA_eDJFwo1QrvNOjBM-i4IPwMfXry3aX4aw-5mCVkB_NsV4j7bLpOasEJexakqlZFNK3g-yO47xcYzC6FxaZ787e_Cnw8AjY7O_tkVxfyf5zuWkL1v8QpjNMhJDB5sfNcbam5s1kxo8yfD1bwwxPobTR2TNXs9oYRygnRbdtKyR8ACoGVVw</recordid><startdate>20040801</startdate><enddate>20040801</enddate><creator>Zhao, Q</creator><creator>Davis, M.E</creator><creator>Hines, H.C</creator><general>Am Soc Animal Sci</general><general>American Society of Animal Science</general><scope>FBQ</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>20040801</creationdate><title>Associations of polymorphisms in the Pit-1 gene with growth and carcass traits in Angus beef cattle</title><author>Zhao, Q ; Davis, M.E ; Hines, H.C</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-f323t-1979feb6fe1f79187e3d9d9c5eface2c3b3b7c1d3fd70358845fc9e9df2e63503</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2004</creationdate><topic>Angus</topic><topic>animal genetics</topic><topic>animal growth</topic><topic>Animal productions</topic><topic>Animals</topic><topic>beef cattle</topic><topic>beef quality</topic><topic>biochemical polymorphism</topic><topic>Biological and medical sciences</topic><topic>Body Composition - genetics</topic><topic>Bos</topic><topic>carcass characteristics</topic><topic>Cattle - genetics</topic><topic>Cattle - growth & development</topic><topic>DNA-Binding Proteins - genetics</topic><topic>Exons</topic><topic>Female</topic><topic>Food industries</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Genetic Linkage</topic><topic>Genetic Markers</topic><topic>genetic variation</topic><topic>genotype</topic><topic>growth traits</topic><topic>insulin-like growth factor I</topic><topic>Insulin-Like Growth Factor I - analysis</topic><topic>Insulin-Like Growth Factor I - genetics</topic><topic>Introns</topic><topic>Linear Models</topic><topic>Male</topic><topic>Meat and meat product industries</topic><topic>molecular sequence data</topic><topic>Pit-1 gene</topic><topic>Polymorphism, Single-Stranded Conformational</topic><topic>Quantitative Trait, Heritable</topic><topic>Random Allocation</topic><topic>Selection, Genetic</topic><topic>sequence analysis</topic><topic>single-stranded conformational polymorphism</topic><topic>Terrestrial animal productions</topic><topic>Transcription Factor Pit-1</topic><topic>Transcription Factors - genetics</topic><topic>Vertebrates</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Zhao, Q</creatorcontrib><creatorcontrib>Davis, M.E</creatorcontrib><creatorcontrib>Hines, H.C</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of animal science</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Zhao, Q</au><au>Davis, M.E</au><au>Hines, H.C</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Associations of polymorphisms in the Pit-1 gene with growth and carcass traits in Angus beef cattle</atitle><jtitle>Journal of animal science</jtitle><addtitle>J Anim Sci</addtitle><date>2004-08-01</date><risdate>2004</risdate><volume>82</volume><issue>8</issue><spage>2229</spage><epage>2233</epage><pages>2229-2233</pages><issn>0021-8812</issn><eissn>1525-3163</eissn><abstract>The Pit-1 gene was studied as a candidate for genetic markers of growth and carcass traits. Angus beef cattle that were divergently selected for high- or low-blood serum IGF-I concentration were used in this study. The single-strand conformation polymorphism method was used to identify polymorphism in the Pit-1 gene including regions from intron 2 to exon 6. Two polymorphisms, Pit1I3H (HinfI) and Pit1I3NL (NlaIII), were detected in intron 3 of the Pit-1 gene. One polymorphism, Pit1I4N (BstNI), was found in intron 4, and a single nucleotide polymorphism, Pit1I5, was found in intron 5. The previously reported polymorphism in exon 6, Pit1E6H (HinfI), was also studied in 416 Angus beef cattle. Associations of the polymorphisms with growth traits, carcass traits, and IGF-I concentration were analyzed using a general linear model procedure. No significant associations were observed between these polymorphisms and growth and carcass traits.</abstract><cop>Savoy, IL</cop><pub>Am Soc Animal Sci</pub><pmid>15318718</pmid><doi>10.2527/2004.8282229x</doi><tpages>5</tpages></addata></record> |
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subjects | Angus animal genetics animal growth Animal productions Animals beef cattle beef quality biochemical polymorphism Biological and medical sciences Body Composition - genetics Bos carcass characteristics Cattle - genetics Cattle - growth & development DNA-Binding Proteins - genetics Exons Female Food industries Fundamental and applied biological sciences. Psychology Genetic Linkage Genetic Markers genetic variation genotype growth traits insulin-like growth factor I Insulin-Like Growth Factor I - analysis Insulin-Like Growth Factor I - genetics Introns Linear Models Male Meat and meat product industries molecular sequence data Pit-1 gene Polymorphism, Single-Stranded Conformational Quantitative Trait, Heritable Random Allocation Selection, Genetic sequence analysis single-stranded conformational polymorphism Terrestrial animal productions Transcription Factor Pit-1 Transcription Factors - genetics Vertebrates |
title | Associations of polymorphisms in the Pit-1 gene with growth and carcass traits in Angus beef cattle |
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