SPrCY: comparison of structural predictions in the Saccharomyces cerevisiae genome

SPrCY is a web-accessible database which provides comparison of structure prediction results for the Saccharomyces cerevisiae genome. This web service offers the ability to search, analyze and compare the yeast structural predictions from sequence-only (Superfamily, PDBAA BLAST and Pfam) and sequenc...

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Bibliographic Details
Published in:Bioinformatics 2004-09, Vol.20 (14), p.2312-2314
Main Authors: Dolinsky, T. J., Burgers, P. M. J., Karplus, K., Baker, N. A.
Format: Article
Language:English
Subjects:
Algorithms
Biological and medical sciences
Chromosome Mapping - methods
Databases, Genetic
Fundamental and applied biological sciences. Psychology
General aspects
Information Storage and Retrieval - methods
Internet
Mathematics in biology. Statistical analysis. Models. Metrology. Data processing in biology (general aspects)
Models, Molecular
Protein Conformation
Saccharomyces cerevisiae
Saccharomyces cerevisiae - genetics
Saccharomyces cerevisiae - metabolism
Saccharomyces cerevisiae Proteins - chemistry
Saccharomyces cerevisiae Proteins - genetics
Sequence Alignment - methods
Sequence Analysis, Protein - methods
Structure-Activity Relationship
User-Computer Interface
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Description
Summary:SPrCY is a web-accessible database which provides comparison of structure prediction results for the Saccharomyces cerevisiae genome. This web service offers the ability to search, analyze and compare the yeast structural predictions from sequence-only (Superfamily, PDBAA BLAST and Pfam) and sequence-structure-based (SAM-T02, 3D-PSSM, mGenTHREADER) methods. Availability: The service is freely available via web at http://agave.wustl.edu/yeast/
ISSN:1367-4803
1460-2059
1367-4811
DOI:10.1093/bioinformatics/bth223