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Characterization of Type I Collagen Fibril Formation Using Thioflavin T Fluorescent Dye
Collagen is composed of fibrils that are formed by self-assembly of smaller units, monomers which are triple-helical polypeptide. However, the mechanism of fibril formation at the level of individual molecules has remained to be clarified. We found that the fluorescence of thioflavin T, which has be...
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Published in: | Journal of biochemistry (Tokyo) 2009-05, Vol.145 (5), p.677-684 |
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creator | Morimoto, Koichi Kawabata, Kazuya Kunii, Saori Hamano, Kaori Saito, Takuya Tonomura, Ben'ichiro |
description | Collagen is composed of fibrils that are formed by self-assembly of smaller units, monomers which are triple-helical polypeptide. However, the mechanism of fibril formation at the level of individual molecules has remained to be clarified. We found that the fluorescence of thioflavin T, which has been widely used as a specific dye for amyloid fibrils, also increased by binding with fibrils of atelocollagen prepared from yellowfin tuna skin. There was a linear correlation between the fluorescence increase and the amount of atelocollagen within a collagen concentration range of 0-0.15 mg/ml at pH 6.5 with 50 μM thioflavin T. In contrast, neither actinidain-processed collagen that keeps monomeric nature nor heat-denatured collagen could cause the fluorescence increase of thioflavin T at all. The relationship between the fluorescence increase and thioflavin T concentration was fit to a theoretical binary binding curve. An apparent dissociation constant, Kd, and a maximal fluorescence increase, ΔFmax, were calculated at various pHs. The values of Kd and ΔFmax were dependent on pH (Kd was 9.4 μM at pH 6.5). The present finding demonstrates that thioflavin T specifically binds to collagen fibrils and may be used as a sensitive tool for the study of collagen structure. |
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However, the mechanism of fibril formation at the level of individual molecules has remained to be clarified. We found that the fluorescence of thioflavin T, which has been widely used as a specific dye for amyloid fibrils, also increased by binding with fibrils of atelocollagen prepared from yellowfin tuna skin. There was a linear correlation between the fluorescence increase and the amount of atelocollagen within a collagen concentration range of 0-0.15 mg/ml at pH 6.5 with 50 μM thioflavin T. In contrast, neither actinidain-processed collagen that keeps monomeric nature nor heat-denatured collagen could cause the fluorescence increase of thioflavin T at all. The relationship between the fluorescence increase and thioflavin T concentration was fit to a theoretical binary binding curve. An apparent dissociation constant, Kd, and a maximal fluorescence increase, ΔFmax, were calculated at various pHs. The values of Kd and ΔFmax were dependent on pH (Kd was 9.4 μM at pH 6.5). The present finding demonstrates that thioflavin T specifically binds to collagen fibrils and may be used as a sensitive tool for the study of collagen structure.</description><identifier>ISSN: 0021-924X</identifier><identifier>EISSN: 1756-2651</identifier><identifier>DOI: 10.1093/jb/mvp025</identifier><identifier>PMID: 19204013</identifier><language>eng</language><publisher>England: Japanese Biochemical Society</publisher><subject>Animals ; Centrifugation ; Circular Dichroism ; collagen ; Collagen - metabolism ; Collagen - ultrastructure ; Electrophoresis, Polyacrylamide Gel ; fibril formation ; Fibrillar Collagens - metabolism ; Fibrillar Collagens - ultrastructure ; fluorescence ; Fluorescent Dyes - metabolism ; Hydrogen-Ion Concentration ; Protein Stability ; Spectrometry, Fluorescence ; Temperature ; Thiazoles - metabolism ; thioflavin T ; Tuna</subject><ispartof>Journal of biochemistry (Tokyo), 2009-05, Vol.145 (5), p.677-684</ispartof><rights>The Authors 2009. Published by Oxford University Press on behalf of the Japanese Biochemical Society. All rights reserved 2009</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c398t-afed9267d8bb1d1f44f54c4730fc7a0f1024a939e4f0553a1a015a7e3df4691b3</citedby><cites>FETCH-LOGICAL-c398t-afed9267d8bb1d1f44f54c4730fc7a0f1024a939e4f0553a1a015a7e3df4691b3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,778,782,27911,27912</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/19204013$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Morimoto, Koichi</creatorcontrib><creatorcontrib>Kawabata, Kazuya</creatorcontrib><creatorcontrib>Kunii, Saori</creatorcontrib><creatorcontrib>Hamano, Kaori</creatorcontrib><creatorcontrib>Saito, Takuya</creatorcontrib><creatorcontrib>Tonomura, Ben'ichiro</creatorcontrib><title>Characterization of Type I Collagen Fibril Formation Using Thioflavin T Fluorescent Dye</title><title>Journal of biochemistry (Tokyo)</title><addtitle>J Biochem</addtitle><description>Collagen is composed of fibrils that are formed by self-assembly of smaller units, monomers which are triple-helical polypeptide. However, the mechanism of fibril formation at the level of individual molecules has remained to be clarified. We found that the fluorescence of thioflavin T, which has been widely used as a specific dye for amyloid fibrils, also increased by binding with fibrils of atelocollagen prepared from yellowfin tuna skin. There was a linear correlation between the fluorescence increase and the amount of atelocollagen within a collagen concentration range of 0-0.15 mg/ml at pH 6.5 with 50 μM thioflavin T. In contrast, neither actinidain-processed collagen that keeps monomeric nature nor heat-denatured collagen could cause the fluorescence increase of thioflavin T at all. The relationship between the fluorescence increase and thioflavin T concentration was fit to a theoretical binary binding curve. An apparent dissociation constant, Kd, and a maximal fluorescence increase, ΔFmax, were calculated at various pHs. The values of Kd and ΔFmax were dependent on pH (Kd was 9.4 μM at pH 6.5). The present finding demonstrates that thioflavin T specifically binds to collagen fibrils and may be used as a sensitive tool for the study of collagen structure.</description><subject>Animals</subject><subject>Centrifugation</subject><subject>Circular Dichroism</subject><subject>collagen</subject><subject>Collagen - metabolism</subject><subject>Collagen - ultrastructure</subject><subject>Electrophoresis, Polyacrylamide Gel</subject><subject>fibril formation</subject><subject>Fibrillar Collagens - metabolism</subject><subject>Fibrillar Collagens - ultrastructure</subject><subject>fluorescence</subject><subject>Fluorescent Dyes - metabolism</subject><subject>Hydrogen-Ion Concentration</subject><subject>Protein Stability</subject><subject>Spectrometry, Fluorescence</subject><subject>Temperature</subject><subject>Thiazoles - metabolism</subject><subject>thioflavin T</subject><subject>Tuna</subject><issn>0021-924X</issn><issn>1756-2651</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2009</creationdate><recordtype>article</recordtype><recordid>eNp90E9P2zAYBnBr2gQdcNgX2HyYJu0Q8Os_cXOcwrqiIQGi1dAulpPYxV0SBztBK5-eoFTjtpNl6afnffQg9AHIKZCMnW2Ls-axI1S8QTOQIk1oKuAtmhFCIckovztE72PcvnwpYwfoEDJKOAE2Q7_yex102ZvgnnTvfIu9xatdZ_AFzn1d641p8cIVwdV44UMzmXV07Qav7p23tX50LV7hRT34YGJp2h6f78wxemd1Hc3J_j1C68X3Vb5MLq9-XOTfLpOSZfM-0dZUGU1lNS8KqMBybgUvuWTEllITC4RynbHMcEuEYBo0AaGlYZXlaQYFO0Jfptwu-IfBxF41biwxFm-NH6JKJczlHGCEXydYBh9jMFZ1wTU67BQQ9bKi2hZqWnG0H_ehQ9GY6lXuZxvB5wn4oftvTjIxF3vz9x_U4c_Yi0mhlne_Fbu5yX9e51wtR_9p8lZ7pTfBRbW-peNBAikVREr2DA5rklg</recordid><startdate>20090501</startdate><enddate>20090501</enddate><creator>Morimoto, Koichi</creator><creator>Kawabata, Kazuya</creator><creator>Kunii, Saori</creator><creator>Hamano, Kaori</creator><creator>Saito, Takuya</creator><creator>Tonomura, Ben'ichiro</creator><general>Japanese Biochemical Society</general><general>Oxford University Press</general><scope>FBQ</scope><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20090501</creationdate><title>Characterization of Type I Collagen Fibril Formation Using Thioflavin T Fluorescent Dye</title><author>Morimoto, Koichi ; Kawabata, Kazuya ; Kunii, Saori ; Hamano, Kaori ; Saito, Takuya ; Tonomura, Ben'ichiro</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c398t-afed9267d8bb1d1f44f54c4730fc7a0f1024a939e4f0553a1a015a7e3df4691b3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2009</creationdate><topic>Animals</topic><topic>Centrifugation</topic><topic>Circular Dichroism</topic><topic>collagen</topic><topic>Collagen - metabolism</topic><topic>Collagen - ultrastructure</topic><topic>Electrophoresis, Polyacrylamide Gel</topic><topic>fibril formation</topic><topic>Fibrillar Collagens - metabolism</topic><topic>Fibrillar Collagens - ultrastructure</topic><topic>fluorescence</topic><topic>Fluorescent Dyes - metabolism</topic><topic>Hydrogen-Ion Concentration</topic><topic>Protein Stability</topic><topic>Spectrometry, Fluorescence</topic><topic>Temperature</topic><topic>Thiazoles - metabolism</topic><topic>thioflavin T</topic><topic>Tuna</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Morimoto, Koichi</creatorcontrib><creatorcontrib>Kawabata, Kazuya</creatorcontrib><creatorcontrib>Kunii, Saori</creatorcontrib><creatorcontrib>Hamano, Kaori</creatorcontrib><creatorcontrib>Saito, Takuya</creatorcontrib><creatorcontrib>Tonomura, Ben'ichiro</creatorcontrib><collection>AGRIS</collection><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of biochemistry (Tokyo)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Morimoto, Koichi</au><au>Kawabata, Kazuya</au><au>Kunii, Saori</au><au>Hamano, Kaori</au><au>Saito, Takuya</au><au>Tonomura, Ben'ichiro</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Characterization of Type I Collagen Fibril Formation Using Thioflavin T Fluorescent Dye</atitle><jtitle>Journal of biochemistry (Tokyo)</jtitle><addtitle>J Biochem</addtitle><date>2009-05-01</date><risdate>2009</risdate><volume>145</volume><issue>5</issue><spage>677</spage><epage>684</epage><pages>677-684</pages><issn>0021-924X</issn><eissn>1756-2651</eissn><abstract>Collagen is composed of fibrils that are formed by self-assembly of smaller units, monomers which are triple-helical polypeptide. However, the mechanism of fibril formation at the level of individual molecules has remained to be clarified. We found that the fluorescence of thioflavin T, which has been widely used as a specific dye for amyloid fibrils, also increased by binding with fibrils of atelocollagen prepared from yellowfin tuna skin. There was a linear correlation between the fluorescence increase and the amount of atelocollagen within a collagen concentration range of 0-0.15 mg/ml at pH 6.5 with 50 μM thioflavin T. In contrast, neither actinidain-processed collagen that keeps monomeric nature nor heat-denatured collagen could cause the fluorescence increase of thioflavin T at all. The relationship between the fluorescence increase and thioflavin T concentration was fit to a theoretical binary binding curve. An apparent dissociation constant, Kd, and a maximal fluorescence increase, ΔFmax, were calculated at various pHs. The values of Kd and ΔFmax were dependent on pH (Kd was 9.4 μM at pH 6.5). The present finding demonstrates that thioflavin T specifically binds to collagen fibrils and may be used as a sensitive tool for the study of collagen structure.</abstract><cop>England</cop><pub>Japanese Biochemical Society</pub><pmid>19204013</pmid><doi>10.1093/jb/mvp025</doi><tpages>8</tpages></addata></record> |
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subjects | Animals Centrifugation Circular Dichroism collagen Collagen - metabolism Collagen - ultrastructure Electrophoresis, Polyacrylamide Gel fibril formation Fibrillar Collagens - metabolism Fibrillar Collagens - ultrastructure fluorescence Fluorescent Dyes - metabolism Hydrogen-Ion Concentration Protein Stability Spectrometry, Fluorescence Temperature Thiazoles - metabolism thioflavin T Tuna |
title | Characterization of Type I Collagen Fibril Formation Using Thioflavin T Fluorescent Dye |
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