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A novel arsenate respiring isolate that can utilize aromatic substrates
A novel anaerobic bacterium was isolated from the sediment of Onondaga Lake (Syracuse, NY), which can use arsenate [As(V)] as a respiratory electron acceptor. The isolate, designated strain Y5 is a spore-forming, motile rod, with lateral flagella. It is Gram-negative though it phylogenetically falls...
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Published in: | FEMS microbiology ecology 2004-06, Vol.48 (3), p.323-332 |
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description | A novel anaerobic bacterium was isolated from the sediment of Onondaga Lake (Syracuse, NY), which can use arsenate [As(V)] as a respiratory electron acceptor. The isolate, designated strain Y5 is a spore-forming, motile rod, with lateral flagella. It is Gram-negative though it phylogenetically falls within the low G
+
C Gram-positive organisms. In addition to the more usual electron donors such as lactate and succinate, strain Y5 also can use H
2
+
CO
2 chemoautotrophically and metabolize aromatic compounds such as syringic acid, ferulic acid, phenol, benzoate and toluene, coupled to arsenate reduction. Aside from As(V), nitrate, sulfate, thiosulfate and Fe(III) can also serve as electron acceptors. Based on 16S rDNA phylogeny and its physiological characteristics, strain Y5 was identified as most closely related to the genus
Desulfosporosinus. The ability of microorganisms to reduce arsenate for respiration appears to be widely distributed and may be relevant in the biogeochemical cycling of arsenic in environments containing mixed contaminants. |
doi_str_mv | 10.1016/j.femsec.2004.02.008 |
format | article |
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+
C Gram-positive organisms. In addition to the more usual electron donors such as lactate and succinate, strain Y5 also can use H
2
+
CO
2 chemoautotrophically and metabolize aromatic compounds such as syringic acid, ferulic acid, phenol, benzoate and toluene, coupled to arsenate reduction. Aside from As(V), nitrate, sulfate, thiosulfate and Fe(III) can also serve as electron acceptors. Based on 16S rDNA phylogeny and its physiological characteristics, strain Y5 was identified as most closely related to the genus
Desulfosporosinus. The ability of microorganisms to reduce arsenate for respiration appears to be widely distributed and may be relevant in the biogeochemical cycling of arsenic in environments containing mixed contaminants.</description><identifier>ISSN: 0168-6496</identifier><identifier>EISSN: 1574-6941</identifier><identifier>DOI: 10.1016/j.femsec.2004.02.008</identifier><identifier>PMID: 19712302</identifier><language>eng</language><publisher>Oxford, UK: Elsevier B.V</publisher><subject>Anaerobiosis ; Aromatic compounds ; Arsenates ; Arsenates - metabolism ; Arsenic ; Benzoates ; Biogeochemical cycles ; Biological and medical sciences ; Carbon dioxide ; Carbon Dioxide - metabolism ; Cluster Analysis ; Contaminants ; DNA, Bacterial - chemistry ; DNA, Bacterial - genetics ; DNA, Ribosomal - chemistry ; DNA, Ribosomal - genetics ; Ecology ; Electrons ; Ferulic acid ; Flagella ; Fresh Water - microbiology ; Fundamental and applied biological sciences. Psychology ; Hydrocarbons, Aromatic - metabolism ; Hydrogen - metabolism ; Iron ; Lactic acid ; Microbiology ; Microorganisms ; Molecular Sequence Data ; New York ; Nitrates - metabolism ; Oxidation-Reduction ; Peptococcaceae - classification ; Peptococcaceae - isolation & purification ; Peptococcaceae - metabolism ; Phenols ; Phylogeny ; RNA, Ribosomal, 16S - genetics ; rRNA 16S ; Sequence Analysis, DNA ; Substrates ; Sulfates ; Sulfates - metabolism ; Thiosulfate ; Thiosulfates ; Thiosulfates - metabolism ; Toluene</subject><ispartof>FEMS microbiology ecology, 2004-06, Vol.48 (3), p.323-332</ispartof><rights>2004 Federation of European Microbiological Societies</rights><rights>2004 Federation of European Microbiological Societies. Published by Elsevier Science B.V. All rights reserved. 2004</rights><rights>2004 INIST-CNRS</rights><rights>2004 Federation of European Microbiological Societies. Published by Elsevier Science B.V. All rights reserved.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c5823-de4226f3e0dc3cacc184dea2268cae5404b15235468de7e3c66e425b3582d2e03</citedby><cites>FETCH-LOGICAL-c5823-de4226f3e0dc3cacc184dea2268cae5404b15235468de7e3c66e425b3582d2e03</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=15782763$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/19712302$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Liu, Anbo</creatorcontrib><creatorcontrib>Garcia-Dominguez, Elizabeth</creatorcontrib><creatorcontrib>Rhine, E.D</creatorcontrib><creatorcontrib>Young, L.Y</creatorcontrib><title>A novel arsenate respiring isolate that can utilize aromatic substrates</title><title>FEMS microbiology ecology</title><addtitle>FEMS Microbiol Ecol</addtitle><description>A novel anaerobic bacterium was isolated from the sediment of Onondaga Lake (Syracuse, NY), which can use arsenate [As(V)] as a respiratory electron acceptor. The isolate, designated strain Y5 is a spore-forming, motile rod, with lateral flagella. It is Gram-negative though it phylogenetically falls within the low G
+
C Gram-positive organisms. In addition to the more usual electron donors such as lactate and succinate, strain Y5 also can use H
2
+
CO
2 chemoautotrophically and metabolize aromatic compounds such as syringic acid, ferulic acid, phenol, benzoate and toluene, coupled to arsenate reduction. Aside from As(V), nitrate, sulfate, thiosulfate and Fe(III) can also serve as electron acceptors. Based on 16S rDNA phylogeny and its physiological characteristics, strain Y5 was identified as most closely related to the genus
Desulfosporosinus. The ability of microorganisms to reduce arsenate for respiration appears to be widely distributed and may be relevant in the biogeochemical cycling of arsenic in environments containing mixed contaminants.</description><subject>Anaerobiosis</subject><subject>Aromatic compounds</subject><subject>Arsenates</subject><subject>Arsenates - metabolism</subject><subject>Arsenic</subject><subject>Benzoates</subject><subject>Biogeochemical cycles</subject><subject>Biological and medical sciences</subject><subject>Carbon dioxide</subject><subject>Carbon Dioxide - metabolism</subject><subject>Cluster Analysis</subject><subject>Contaminants</subject><subject>DNA, Bacterial - chemistry</subject><subject>DNA, Bacterial - genetics</subject><subject>DNA, Ribosomal - chemistry</subject><subject>DNA, Ribosomal - genetics</subject><subject>Ecology</subject><subject>Electrons</subject><subject>Ferulic acid</subject><subject>Flagella</subject><subject>Fresh Water - microbiology</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Hydrocarbons, Aromatic - metabolism</subject><subject>Hydrogen - metabolism</subject><subject>Iron</subject><subject>Lactic acid</subject><subject>Microbiology</subject><subject>Microorganisms</subject><subject>Molecular Sequence Data</subject><subject>New York</subject><subject>Nitrates - metabolism</subject><subject>Oxidation-Reduction</subject><subject>Peptococcaceae - classification</subject><subject>Peptococcaceae - isolation & purification</subject><subject>Peptococcaceae - metabolism</subject><subject>Phenols</subject><subject>Phylogeny</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>rRNA 16S</subject><subject>Sequence Analysis, DNA</subject><subject>Substrates</subject><subject>Sulfates</subject><subject>Sulfates - metabolism</subject><subject>Thiosulfate</subject><subject>Thiosulfates</subject><subject>Thiosulfates - metabolism</subject><subject>Toluene</subject><issn>0168-6496</issn><issn>1574-6941</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2004</creationdate><recordtype>article</recordtype><recordid>eNqNkU1r3DAQhkVpabZJ_kEphtLe7OjLknwphJCkhZRe2rPQyuNWi21tNXZK8usj44VAD0lOguF53tHwEvKe0YpRps52VQcDgq84pbKivKLUvCIbVmtZqkay12STMVMq2agj8g5xRymrhaRvyRFrNOOC8g25Pi_GeAt94RLC6CYoEuA-pDD-LgLGfplMf9xUeDcW8xT6cA-ZjYObgi9w3uKUMoMn5E3neoTTw3tMfl1d_rz4Wt78uP52cX5T-tpwUbYgOVedANp64Z33zMgWXJ4Z76CWVG5ZzUUtlWlBg_BKZaPeimy3HKg4Jp_X3H2Kf2fAyQ4BPfS9GyHOaJUWTGsqngWZbjTnUmfw43_gLs5pzEdYLhhV2pimyZRcKZ8iYoLO7lMYXLqzjNqlD7uzax926cNSbnMfWftwCJ-3A7SP0qGADHw6AA6967vkRh_wkau14Vot55iV-xd6uHvRcnt1-V3wRT1b1TjvX_rrL6sBucnbAMmiDzB6aEMCP9k2hqcDHgD438pD</recordid><startdate>200406</startdate><enddate>200406</enddate><creator>Liu, Anbo</creator><creator>Garcia-Dominguez, Elizabeth</creator><creator>Rhine, E.D</creator><creator>Young, L.Y</creator><general>Elsevier B.V</general><general>Blackwell Publishing Ltd</general><general>Blackwell</general><general>Oxford University Press</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7QP</scope><scope>7QR</scope><scope>7SN</scope><scope>7T7</scope><scope>7TK</scope><scope>7TM</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>P64</scope><scope>PATMY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PYCSY</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>200406</creationdate><title>A novel arsenate respiring isolate that can utilize aromatic substrates</title><author>Liu, Anbo ; Garcia-Dominguez, Elizabeth ; Rhine, E.D ; Young, L.Y</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c5823-de4226f3e0dc3cacc184dea2268cae5404b15235468de7e3c66e425b3582d2e03</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2004</creationdate><topic>Anaerobiosis</topic><topic>Aromatic compounds</topic><topic>Arsenates</topic><topic>Arsenates - metabolism</topic><topic>Arsenic</topic><topic>Benzoates</topic><topic>Biogeochemical cycles</topic><topic>Biological and medical sciences</topic><topic>Carbon dioxide</topic><topic>Carbon Dioxide - metabolism</topic><topic>Cluster Analysis</topic><topic>Contaminants</topic><topic>DNA, Bacterial - chemistry</topic><topic>DNA, Bacterial - genetics</topic><topic>DNA, Ribosomal - chemistry</topic><topic>DNA, Ribosomal - genetics</topic><topic>Ecology</topic><topic>Electrons</topic><topic>Ferulic acid</topic><topic>Flagella</topic><topic>Fresh Water - microbiology</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Hydrocarbons, Aromatic - metabolism</topic><topic>Hydrogen - metabolism</topic><topic>Iron</topic><topic>Lactic acid</topic><topic>Microbiology</topic><topic>Microorganisms</topic><topic>Molecular Sequence Data</topic><topic>New York</topic><topic>Nitrates - metabolism</topic><topic>Oxidation-Reduction</topic><topic>Peptococcaceae - classification</topic><topic>Peptococcaceae - isolation & purification</topic><topic>Peptococcaceae - metabolism</topic><topic>Phenols</topic><topic>Phylogeny</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>rRNA 16S</topic><topic>Sequence Analysis, DNA</topic><topic>Substrates</topic><topic>Sulfates</topic><topic>Sulfates - metabolism</topic><topic>Thiosulfate</topic><topic>Thiosulfates</topic><topic>Thiosulfates - metabolism</topic><topic>Toluene</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Liu, Anbo</creatorcontrib><creatorcontrib>Garcia-Dominguez, Elizabeth</creatorcontrib><creatorcontrib>Rhine, E.D</creatorcontrib><creatorcontrib>Young, L.Y</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Calcium & Calcified Tissue Abstracts</collection><collection>Chemoreception Abstracts</collection><collection>Ecology Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>ProQuest Health and Medical</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>AUTh Library subscriptions: ProQuest Central</collection><collection>ProQuest Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Biological Sciences</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>PML(ProQuest Medical Library)</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>ProQuest Biological Science Journals</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Environmental Science Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>Environmental Science Collection</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>FEMS microbiology ecology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Liu, Anbo</au><au>Garcia-Dominguez, Elizabeth</au><au>Rhine, E.D</au><au>Young, L.Y</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A novel arsenate respiring isolate that can utilize aromatic substrates</atitle><jtitle>FEMS microbiology ecology</jtitle><addtitle>FEMS Microbiol Ecol</addtitle><date>2004-06</date><risdate>2004</risdate><volume>48</volume><issue>3</issue><spage>323</spage><epage>332</epage><pages>323-332</pages><issn>0168-6496</issn><eissn>1574-6941</eissn><abstract>A novel anaerobic bacterium was isolated from the sediment of Onondaga Lake (Syracuse, NY), which can use arsenate [As(V)] as a respiratory electron acceptor. The isolate, designated strain Y5 is a spore-forming, motile rod, with lateral flagella. It is Gram-negative though it phylogenetically falls within the low G
+
C Gram-positive organisms. In addition to the more usual electron donors such as lactate and succinate, strain Y5 also can use H
2
+
CO
2 chemoautotrophically and metabolize aromatic compounds such as syringic acid, ferulic acid, phenol, benzoate and toluene, coupled to arsenate reduction. Aside from As(V), nitrate, sulfate, thiosulfate and Fe(III) can also serve as electron acceptors. Based on 16S rDNA phylogeny and its physiological characteristics, strain Y5 was identified as most closely related to the genus
Desulfosporosinus. The ability of microorganisms to reduce arsenate for respiration appears to be widely distributed and may be relevant in the biogeochemical cycling of arsenic in environments containing mixed contaminants.</abstract><cop>Oxford, UK</cop><pub>Elsevier B.V</pub><pmid>19712302</pmid><doi>10.1016/j.femsec.2004.02.008</doi><tpages>10</tpages><oa>free_for_read</oa></addata></record> |
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source | OUP_牛津大学出版社OA刊 |
subjects | Anaerobiosis Aromatic compounds Arsenates Arsenates - metabolism Arsenic Benzoates Biogeochemical cycles Biological and medical sciences Carbon dioxide Carbon Dioxide - metabolism Cluster Analysis Contaminants DNA, Bacterial - chemistry DNA, Bacterial - genetics DNA, Ribosomal - chemistry DNA, Ribosomal - genetics Ecology Electrons Ferulic acid Flagella Fresh Water - microbiology Fundamental and applied biological sciences. Psychology Hydrocarbons, Aromatic - metabolism Hydrogen - metabolism Iron Lactic acid Microbiology Microorganisms Molecular Sequence Data New York Nitrates - metabolism Oxidation-Reduction Peptococcaceae - classification Peptococcaceae - isolation & purification Peptococcaceae - metabolism Phenols Phylogeny RNA, Ribosomal, 16S - genetics rRNA 16S Sequence Analysis, DNA Substrates Sulfates Sulfates - metabolism Thiosulfate Thiosulfates Thiosulfates - metabolism Toluene |
title | A novel arsenate respiring isolate that can utilize aromatic substrates |
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