Haploview: analysis and visualization of LD and haplotype maps

Research over the last few years has revealed significant haplotype structure in the human genome. The characterization of these patterns, particularly in the context of medical genetic association studies, is becoming a routine research activity. Haploview is a software package that provides comput...

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Bibliographic Details
Published in:Bioinformatics 2005-01, Vol.21 (2), p.263-265
Main Authors: Barrett, J. C., Fry, B., Maller, J., Daly, M. J.
Format: Article
Language:English
Subjects:
Algorithms
Biological and medical sciences
Chromosome Mapping - methods
Fundamental and applied biological sciences. Psychology
General aspects
Haplotypes - genetics
Internet
Linkage Disequilibrium - genetics
Mathematics in biology. Statistical analysis. Models. Metrology. Data processing in biology (general aspects)
Programming Languages
Sequence Alignment - methods
Sequence Analysis, DNA - methods
Software
User-Computer Interface
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Summary:Research over the last few years has revealed significant haplotype structure in the human genome. The characterization of these patterns, particularly in the context of medical genetic association studies, is becoming a routine research activity. Haploview is a software package that provides computation of linkage disequilibrium statistics and population haplotype patterns from primary genotype data in a visually appealing and interactive interface. Availability: http://www.broad.mit.edu/mpg/haploview/ Contact: jcbarret@broad.mit.edu
ISSN:1367-4803
1460-2059
1367-4811
DOI:10.1093/bioinformatics/bth457