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Functional specificity of Candida albicans Als3p proteins and clade specificity of ALS3 alleles discriminated by the number of copies of the tandem repeat sequence in the central domain
1 Department of Veterinary Pathobiology, University of Illinois at Urbana-Champaign, Urbana, IL 61802, USA 2 Department of Biological Sciences, The University of Iowa, Iowa City, IA 52242, USA Correspondence Lois L. Hoyer lhoyer{at}uiuc.edu Candida albicans strain SC5314 contains two ALS3 alleles, w...
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Published in: | Microbiology (Society for General Microbiology) 2005-03, Vol.151 (3), p.673-681 |
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creator | Oh, Soon-Hwan Cheng, Georgina Nuessen, Jennifer A Jajko, Robert Yeater, Kathleen M Zhao, Xiaomin Pujol, Claude Soll, David R Hoyer, Lois L |
description | 1 Department of Veterinary Pathobiology, University of Illinois at Urbana-Champaign, Urbana, IL 61802, USA
2 Department of Biological Sciences, The University of Iowa, Iowa City, IA 52242, USA
Correspondence Lois L. Hoyer lhoyer{at}uiuc.edu
Candida albicans strain SC5314 contains two ALS3 alleles, which differ in sequence with respect to the number of copies of the 108 bp tandem repeat sequence within the central domain of the coding region. One allele ( ALS3 ( 12 )) has 12 tandem repeat copies while the other ( ALS3 ( 9 )) has 9 copies. Wild-type C. albicans ( ALS3 ( 12 )/ ALS3 ( 9 )) and those containing various ALS3 alleles ( ALS3 ( 12 )/ als3 ( 9 ), als3 ( 12 )/ ALS3 ( 9 ) and als3 ( 12 )/ als3 ( 9 )) were assayed for adhesion to monolayers of cultured vascular endothelial and pharyngeal epithelial cells. These assays showed obvious adhesive function for the larger Als3p protein, compared to a minor contribution to adhesion from the smaller protein. These functional differences in strain SC5314 prompted examination of ALS3 allelic diversity across the five major genetic clades of C. albicans . This analysis focused on the number of copies of the tandem repeat sequence within the central domain of the coding region and showed a range of alleles encoding from 6 to 19 tandem repeat copies. Clades differed with respect to prevalent ALS3 alleles and allele distribution, but were similar for the mean number of tandem repeat copies per ALS3 allele. Analysis of allelic pairing showed clade differences and the tendency for C. albicans strains to encode one longer and one shorter ALS3 allele. The allelic variability observed for ALS3 and its functional consequences observed in strain SC5314 highlight the importance of understanding ALS allelic diversity in order to draw accurate conclusions about Als protein function.
Abbreviations: HUVEC, human umbilical vein endothelial cells |
doi_str_mv | 10.1099/mic.0.27680-0 |
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2 Department of Biological Sciences, The University of Iowa, Iowa City, IA 52242, USA
Correspondence Lois L. Hoyer lhoyer{at}uiuc.edu
Candida albicans strain SC5314 contains two ALS3 alleles, which differ in sequence with respect to the number of copies of the 108 bp tandem repeat sequence within the central domain of the coding region. One allele ( ALS3 ( 12 )) has 12 tandem repeat copies while the other ( ALS3 ( 9 )) has 9 copies. Wild-type C. albicans ( ALS3 ( 12 )/ ALS3 ( 9 )) and those containing various ALS3 alleles ( ALS3 ( 12 )/ als3 ( 9 ), als3 ( 12 )/ ALS3 ( 9 ) and als3 ( 12 )/ als3 ( 9 )) were assayed for adhesion to monolayers of cultured vascular endothelial and pharyngeal epithelial cells. These assays showed obvious adhesive function for the larger Als3p protein, compared to a minor contribution to adhesion from the smaller protein. These functional differences in strain SC5314 prompted examination of ALS3 allelic diversity across the five major genetic clades of C. albicans . This analysis focused on the number of copies of the tandem repeat sequence within the central domain of the coding region and showed a range of alleles encoding from 6 to 19 tandem repeat copies. Clades differed with respect to prevalent ALS3 alleles and allele distribution, but were similar for the mean number of tandem repeat copies per ALS3 allele. Analysis of allelic pairing showed clade differences and the tendency for C. albicans strains to encode one longer and one shorter ALS3 allele. The allelic variability observed for ALS3 and its functional consequences observed in strain SC5314 highlight the importance of understanding ALS allelic diversity in order to draw accurate conclusions about Als protein function.
Abbreviations: HUVEC, human umbilical vein endothelial cells</description><identifier>ISSN: 1350-0872</identifier><identifier>EISSN: 1465-2080</identifier><identifier>DOI: 10.1099/mic.0.27680-0</identifier><identifier>PMID: 15758214</identifier><language>eng</language><publisher>Reading: Soc General Microbiol</publisher><subject>Alleles ; Biological and medical sciences ; Candida albicans ; Candida albicans - genetics ; Candida albicans - metabolism ; Candida albicans - physiology ; Cell Adhesion ; Cells, Cultured ; Endothelial Cells - microbiology ; Endothelium, Vascular - cytology ; Fundamental and applied biological sciences. Psychology ; Fungal Proteins - chemistry ; Fungal Proteins - genetics ; Fungal Proteins - metabolism ; Gene Dosage ; Gene Expression Regulation, Fungal ; Growth, nutrition, metabolism, transports, enzymes. Molecular biology ; Humans ; Microbiology ; Mycology ; Pharynx - cytology ; Pharynx - microbiology ; Tandem Repeat Sequences - genetics ; Umbilical Veins</subject><ispartof>Microbiology (Society for General Microbiology), 2005-03, Vol.151 (3), p.673-681</ispartof><rights>2005 INIST-CNRS</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c424t-8389a5cedc0e0bdb18e8b31805b84a63dc1c792a959162ee911ef620f9d1f3a53</citedby><cites>FETCH-LOGICAL-c424t-8389a5cedc0e0bdb18e8b31805b84a63dc1c792a959162ee911ef620f9d1f3a53</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27922,27923</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=16618353$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/15758214$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Oh, Soon-Hwan</creatorcontrib><creatorcontrib>Cheng, Georgina</creatorcontrib><creatorcontrib>Nuessen, Jennifer A</creatorcontrib><creatorcontrib>Jajko, Robert</creatorcontrib><creatorcontrib>Yeater, Kathleen M</creatorcontrib><creatorcontrib>Zhao, Xiaomin</creatorcontrib><creatorcontrib>Pujol, Claude</creatorcontrib><creatorcontrib>Soll, David R</creatorcontrib><creatorcontrib>Hoyer, Lois L</creatorcontrib><title>Functional specificity of Candida albicans Als3p proteins and clade specificity of ALS3 alleles discriminated by the number of copies of the tandem repeat sequence in the central domain</title><title>Microbiology (Society for General Microbiology)</title><addtitle>Microbiology</addtitle><description>1 Department of Veterinary Pathobiology, University of Illinois at Urbana-Champaign, Urbana, IL 61802, USA
2 Department of Biological Sciences, The University of Iowa, Iowa City, IA 52242, USA
Correspondence Lois L. Hoyer lhoyer{at}uiuc.edu
Candida albicans strain SC5314 contains two ALS3 alleles, which differ in sequence with respect to the number of copies of the 108 bp tandem repeat sequence within the central domain of the coding region. One allele ( ALS3 ( 12 )) has 12 tandem repeat copies while the other ( ALS3 ( 9 )) has 9 copies. Wild-type C. albicans ( ALS3 ( 12 )/ ALS3 ( 9 )) and those containing various ALS3 alleles ( ALS3 ( 12 )/ als3 ( 9 ), als3 ( 12 )/ ALS3 ( 9 ) and als3 ( 12 )/ als3 ( 9 )) were assayed for adhesion to monolayers of cultured vascular endothelial and pharyngeal epithelial cells. These assays showed obvious adhesive function for the larger Als3p protein, compared to a minor contribution to adhesion from the smaller protein. These functional differences in strain SC5314 prompted examination of ALS3 allelic diversity across the five major genetic clades of C. albicans . This analysis focused on the number of copies of the tandem repeat sequence within the central domain of the coding region and showed a range of alleles encoding from 6 to 19 tandem repeat copies. Clades differed with respect to prevalent ALS3 alleles and allele distribution, but were similar for the mean number of tandem repeat copies per ALS3 allele. Analysis of allelic pairing showed clade differences and the tendency for C. albicans strains to encode one longer and one shorter ALS3 allele. The allelic variability observed for ALS3 and its functional consequences observed in strain SC5314 highlight the importance of understanding ALS allelic diversity in order to draw accurate conclusions about Als protein function.
Abbreviations: HUVEC, human umbilical vein endothelial cells</description><subject>Alleles</subject><subject>Biological and medical sciences</subject><subject>Candida albicans</subject><subject>Candida albicans - genetics</subject><subject>Candida albicans - metabolism</subject><subject>Candida albicans - physiology</subject><subject>Cell Adhesion</subject><subject>Cells, Cultured</subject><subject>Endothelial Cells - microbiology</subject><subject>Endothelium, Vascular - cytology</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Fungal Proteins - chemistry</subject><subject>Fungal Proteins - genetics</subject><subject>Fungal Proteins - metabolism</subject><subject>Gene Dosage</subject><subject>Gene Expression Regulation, Fungal</subject><subject>Growth, nutrition, metabolism, transports, enzymes. Molecular biology</subject><subject>Humans</subject><subject>Microbiology</subject><subject>Mycology</subject><subject>Pharynx - cytology</subject><subject>Pharynx - microbiology</subject><subject>Tandem Repeat Sequences - genetics</subject><subject>Umbilical Veins</subject><issn>1350-0872</issn><issn>1465-2080</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2005</creationdate><recordtype>article</recordtype><recordid>eNqFkU1v1DAQhiMEoqVw5Ip8oeKSxY7jxDmuVrRFWqkH4Gw59qRr5DjBdoT2p_HvOumuVIlLTx7PPPPOV1F8ZHTDaNd9HZ3Z0E3VNpKW9FVxyepGlBWV9DXaXKBTttVF8S6l35RikLK3xQUTrZAVqy-LfzdLMNlNQXuSZjBucMblI5kGstPBOquJ9r0zOiSy9YnPZI5TBodfDBPjtYX_E7f7HxyzPHhIxLpkohtd0Bks6Y8kH4CEZewhrqyZZocUWqs_oyaMJMIMOpMEfxYIBogLT1EDIUfs006jduF98WbQPsGH83tV_Lr59nN3V-7vb7_vtvvS1FWdS8llp4UBayjQ3vZMguw5k1T0stYNt4aZtqt0JzrWVAAdYzA0FR06ywauBb8qrk-6ODj2k7IacSTwXgeYlqSaVlDcc_0iyFq8RMdWxfIEmjilFGFQM25Ix6NiVK1HxUSjqHo6qqLIfzoLL_0I9pk-XxGBz2dAJ6P9EHUwLj1zTcMkFxy5Lyfu4B4Of10E9QABa8Wpd9NalAmmOE7E-SML9Ltf</recordid><startdate>20050301</startdate><enddate>20050301</enddate><creator>Oh, Soon-Hwan</creator><creator>Cheng, Georgina</creator><creator>Nuessen, Jennifer A</creator><creator>Jajko, Robert</creator><creator>Yeater, Kathleen M</creator><creator>Zhao, Xiaomin</creator><creator>Pujol, Claude</creator><creator>Soll, David R</creator><creator>Hoyer, Lois L</creator><general>Soc General Microbiol</general><general>Society for General Microbiology</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>M7N</scope><scope>7X8</scope></search><sort><creationdate>20050301</creationdate><title>Functional specificity of Candida albicans Als3p proteins and clade specificity of ALS3 alleles discriminated by the number of copies of the tandem repeat sequence in the central domain</title><author>Oh, Soon-Hwan ; Cheng, Georgina ; Nuessen, Jennifer A ; Jajko, Robert ; Yeater, Kathleen M ; Zhao, Xiaomin ; Pujol, Claude ; Soll, David R ; Hoyer, Lois L</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c424t-8389a5cedc0e0bdb18e8b31805b84a63dc1c792a959162ee911ef620f9d1f3a53</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2005</creationdate><topic>Alleles</topic><topic>Biological and medical sciences</topic><topic>Candida albicans</topic><topic>Candida albicans - genetics</topic><topic>Candida albicans - metabolism</topic><topic>Candida albicans - physiology</topic><topic>Cell Adhesion</topic><topic>Cells, Cultured</topic><topic>Endothelial Cells - microbiology</topic><topic>Endothelium, Vascular - cytology</topic><topic>Fundamental and applied biological sciences. 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2 Department of Biological Sciences, The University of Iowa, Iowa City, IA 52242, USA
Correspondence Lois L. Hoyer lhoyer{at}uiuc.edu
Candida albicans strain SC5314 contains two ALS3 alleles, which differ in sequence with respect to the number of copies of the 108 bp tandem repeat sequence within the central domain of the coding region. One allele ( ALS3 ( 12 )) has 12 tandem repeat copies while the other ( ALS3 ( 9 )) has 9 copies. Wild-type C. albicans ( ALS3 ( 12 )/ ALS3 ( 9 )) and those containing various ALS3 alleles ( ALS3 ( 12 )/ als3 ( 9 ), als3 ( 12 )/ ALS3 ( 9 ) and als3 ( 12 )/ als3 ( 9 )) were assayed for adhesion to monolayers of cultured vascular endothelial and pharyngeal epithelial cells. These assays showed obvious adhesive function for the larger Als3p protein, compared to a minor contribution to adhesion from the smaller protein. These functional differences in strain SC5314 prompted examination of ALS3 allelic diversity across the five major genetic clades of C. albicans . This analysis focused on the number of copies of the tandem repeat sequence within the central domain of the coding region and showed a range of alleles encoding from 6 to 19 tandem repeat copies. Clades differed with respect to prevalent ALS3 alleles and allele distribution, but were similar for the mean number of tandem repeat copies per ALS3 allele. Analysis of allelic pairing showed clade differences and the tendency for C. albicans strains to encode one longer and one shorter ALS3 allele. The allelic variability observed for ALS3 and its functional consequences observed in strain SC5314 highlight the importance of understanding ALS allelic diversity in order to draw accurate conclusions about Als protein function.
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subjects | Alleles Biological and medical sciences Candida albicans Candida albicans - genetics Candida albicans - metabolism Candida albicans - physiology Cell Adhesion Cells, Cultured Endothelial Cells - microbiology Endothelium, Vascular - cytology Fundamental and applied biological sciences. Psychology Fungal Proteins - chemistry Fungal Proteins - genetics Fungal Proteins - metabolism Gene Dosage Gene Expression Regulation, Fungal Growth, nutrition, metabolism, transports, enzymes. Molecular biology Humans Microbiology Mycology Pharynx - cytology Pharynx - microbiology Tandem Repeat Sequences - genetics Umbilical Veins |
title | Functional specificity of Candida albicans Als3p proteins and clade specificity of ALS3 alleles discriminated by the number of copies of the tandem repeat sequence in the central domain |
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