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Cloning and Characterization of a Second form of the Rice Adenine Phosphoribosyl Transferase Gene (OsAPT2) and its Association with TGMS

A rice gene, OsAPT2, which encodes a putative adenine phosphoribosyl transferase (APRT), was cloned and characterized. Analysis of the cDNA and genomic sequences revealed seven exons and six introns in the OsAPT2. The deduced amino acid sequence of OsAPT2 is highly homologous to those of previously...

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Published in:Plant molecular biology 2006-02, Vol.60 (3), p.365-376
Main Authors: Zhou, C.J, Li, J, Zou, J.C, Liang, F.S, Ye, C.J, Jin, D.M, Weng, M.L, Wang, B
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Wang, B
description A rice gene, OsAPT2, which encodes a putative adenine phosphoribosyl transferase (APRT), was cloned and characterized. Analysis of the cDNA and genomic sequences revealed seven exons and six introns in the OsAPT2. The deduced amino acid sequence of OsAPT2 is highly homologous to those of previously isolated APRTs. RT-PCR analysis indicated that the OsAPT2 transcript in the young panicles of 'Annong S-1' is down-regulated at 29 degrees C, the critical temperature for induction of 'Annong S-1' fertility conversion. Since the panicle is likely the thermo-sensitive organ at the early stages of pollen fertility alternation, the observed heat-induced change in the OsAPT2 expression pattern in young panicles may mediate, at least in part, thermo-sensitive genic male sterility (TGMS) in 'Annong S-1'. An antisense strategy was used to suppress the expression of the OsAPT2 homolog in Arabidopsis, and the obtained homozygous transgenic plants contained lower AMP content, displayed lower pollen germination rates and exhibited some abnormalities in leaf phenotypes and flowering timing. These data suggest that OsAPT2 is likely to be involved in TGMS in the rice line 'Annong S-1'.
doi_str_mv 10.1007/s11103-005-4208-5
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Analysis of the cDNA and genomic sequences revealed seven exons and six introns in the OsAPT2. The deduced amino acid sequence of OsAPT2 is highly homologous to those of previously isolated APRTs. RT-PCR analysis indicated that the OsAPT2 transcript in the young panicles of 'Annong S-1' is down-regulated at 29 degrees C, the critical temperature for induction of 'Annong S-1' fertility conversion. Since the panicle is likely the thermo-sensitive organ at the early stages of pollen fertility alternation, the observed heat-induced change in the OsAPT2 expression pattern in young panicles may mediate, at least in part, thermo-sensitive genic male sterility (TGMS) in 'Annong S-1'. An antisense strategy was used to suppress the expression of the OsAPT2 homolog in Arabidopsis, and the obtained homozygous transgenic plants contained lower AMP content, displayed lower pollen germination rates and exhibited some abnormalities in leaf phenotypes and flowering timing. 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Analysis of the cDNA and genomic sequences revealed seven exons and six introns in the OsAPT2. The deduced amino acid sequence of OsAPT2 is highly homologous to those of previously isolated APRTs. RT-PCR analysis indicated that the OsAPT2 transcript in the young panicles of 'Annong S-1' is down-regulated at 29 degrees C, the critical temperature for induction of 'Annong S-1' fertility conversion. Since the panicle is likely the thermo-sensitive organ at the early stages of pollen fertility alternation, the observed heat-induced change in the OsAPT2 expression pattern in young panicles may mediate, at least in part, thermo-sensitive genic male sterility (TGMS) in 'Annong S-1'. An antisense strategy was used to suppress the expression of the OsAPT2 homolog in Arabidopsis, and the obtained homozygous transgenic plants contained lower AMP content, displayed lower pollen germination rates and exhibited some abnormalities in leaf phenotypes and flowering timing. These data suggest that OsAPT2 is likely to be involved in TGMS in the rice line 'Annong S-1'.</description><subject>Adenine - chemistry</subject><subject>adenine phosphoribosyltransferase</subject><subject>Adenine Phosphoribosyltransferase - chemistry</subject><subject>Adenine Phosphoribosyltransferase - genetics</subject><subject>Adenosine - chemistry</subject><subject>Adenosine Monophosphate - metabolism</subject><subject>Alleles</subject><subject>Amino Acid Sequence</subject><subject>amino acid sequences</subject><subject>Amino acids</subject><subject>Blotting, Northern</subject><subject>Cloning</subject><subject>Cloning, Molecular</subject><subject>complementary DNA</subject><subject>Computational Biology - methods</subject><subject>DNA Primers - chemistry</subject><subject>DNA, Complementary - metabolism</subject><subject>Down-Regulation</subject><subject>Enzymes</subject><subject>Exons</subject><subject>Fertility</subject><subject>gene expression regulation</subject><subject>Gene Expression Regulation, Plant</subject><subject>genes</subject><subject>Genes, Plant</subject><subject>Genetic Vectors</subject><subject>Genomics</subject><subject>Homozygote</subject><subject>Hot Temperature</subject><subject>inflorescences</subject><subject>Introns</subject><subject>Light</subject><subject>Male sterility</subject><subject>messenger RNA</subject><subject>Models, Genetic</subject><subject>Molecular Sequence Data</subject><subject>nucleotide sequences</subject><subject>Nucleotides - chemistry</subject><subject>Oligonucleotides, Antisense - chemistry</subject><subject>Oryza - enzymology</subject><subject>Oryza - genetics</subject><subject>Oryza sativa</subject><subject>Phenotype</subject><subject>plant fertility</subject><subject>Plant Leaves - metabolism</subject><subject>Plant Physiological Phenomena</subject><subject>Pollen</subject><subject>Pollen - metabolism</subject><subject>pollen fertility</subject><subject>pollen germination</subject><subject>Polymerase Chain Reaction</subject><subject>Protein Structure, Secondary</subject><subject>Reverse Transcriptase Polymerase Chain Reaction</subject><subject>Rice</subject><subject>RNA, Messenger - metabolism</subject><subject>Sequence Homology, Amino Acid</subject><subject>Temperature</subject><subject>thermo-sensitive gene male sterility</subject><subject>Transgenes</subject><subject>Transgenic plants</subject><issn>0167-4412</issn><issn>1573-5028</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2006</creationdate><recordtype>article</recordtype><recordid>eNqFkcFu1DAQhi0EotvCA3ABiwOCQ2DGsR3nuFrBglTUit2eLSexG1e78dbOCpUn6GPjkJWQuHAaaeb7_xn7J-QVwkcEqD4lRISyABAFZ6AK8YQsUFRlIYCpp2QBKKuCc2Rn5DylO4CsKuVzcoZSIBcSFuRxtQuDH26pGTq66k007Wij_2VGHwYaHDV0Y9uQhy7E_dQYe0t_-NbSZWez0tLrPqRDH6JvQnrY0W00Q3I2mmTp2ub5-6u0vN6yD39W-DHRZUqh9fOGn37s6Xb9ffOCPHNml-zLU70gN18-b1dfi8ur9bfV8rJoS4VjgYoZxVVTgSiFNVWnGGLj1PQfpnEoeO1AomN17bAGi1gblB2TaJuWt6y8IO9m30MM90ebRr33qbW7nRlsOCYtqwrLulL_BbFmCiSbHN_-A96FYxzyI3QlJeOCC8gQzlAbQ0rROn2Ifm_ig0bQ0_F6DlPnMPUUphZZ8_pkfGz2tvurOKWXgTcz4EzQ5jb6pG82DLDMQUvOpCh_AzSNoVo</recordid><startdate>20060201</startdate><enddate>20060201</enddate><creator>Zhou, C.J</creator><creator>Li, J</creator><creator>Zou, J.C</creator><creator>Liang, F.S</creator><creator>Ye, C.J</creator><creator>Jin, D.M</creator><creator>Weng, M.L</creator><creator>Wang, B</creator><general>Springer Nature B.V</general><scope>FBQ</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7TM</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2O</scope><scope>M7P</scope><scope>MBDVC</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>20060201</creationdate><title>Cloning and Characterization of a Second form of the Rice Adenine Phosphoribosyl Transferase Gene (OsAPT2) and its Association with TGMS</title><author>Zhou, C.J ; 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Analysis of the cDNA and genomic sequences revealed seven exons and six introns in the OsAPT2. The deduced amino acid sequence of OsAPT2 is highly homologous to those of previously isolated APRTs. RT-PCR analysis indicated that the OsAPT2 transcript in the young panicles of 'Annong S-1' is down-regulated at 29 degrees C, the critical temperature for induction of 'Annong S-1' fertility conversion. Since the panicle is likely the thermo-sensitive organ at the early stages of pollen fertility alternation, the observed heat-induced change in the OsAPT2 expression pattern in young panicles may mediate, at least in part, thermo-sensitive genic male sterility (TGMS) in 'Annong S-1'. An antisense strategy was used to suppress the expression of the OsAPT2 homolog in Arabidopsis, and the obtained homozygous transgenic plants contained lower AMP content, displayed lower pollen germination rates and exhibited some abnormalities in leaf phenotypes and flowering timing. These data suggest that OsAPT2 is likely to be involved in TGMS in the rice line 'Annong S-1'.</abstract><cop>Netherlands</cop><pub>Springer Nature B.V</pub><pmid>16514560</pmid><doi>10.1007/s11103-005-4208-5</doi><tpages>12</tpages></addata></record>
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subjects Adenine - chemistry
adenine phosphoribosyltransferase
Adenine Phosphoribosyltransferase - chemistry
Adenine Phosphoribosyltransferase - genetics
Adenosine - chemistry
Adenosine Monophosphate - metabolism
Alleles
Amino Acid Sequence
amino acid sequences
Amino acids
Blotting, Northern
Cloning
Cloning, Molecular
complementary DNA
Computational Biology - methods
DNA Primers - chemistry
DNA, Complementary - metabolism
Down-Regulation
Enzymes
Exons
Fertility
gene expression regulation
Gene Expression Regulation, Plant
genes
Genes, Plant
Genetic Vectors
Genomics
Homozygote
Hot Temperature
inflorescences
Introns
Light
Male sterility
messenger RNA
Models, Genetic
Molecular Sequence Data
nucleotide sequences
Nucleotides - chemistry
Oligonucleotides, Antisense - chemistry
Oryza - enzymology
Oryza - genetics
Oryza sativa
Phenotype
plant fertility
Plant Leaves - metabolism
Plant Physiological Phenomena
Pollen
Pollen - metabolism
pollen fertility
pollen germination
Polymerase Chain Reaction
Protein Structure, Secondary
Reverse Transcriptase Polymerase Chain Reaction
Rice
RNA, Messenger - metabolism
Sequence Homology, Amino Acid
Temperature
thermo-sensitive gene male sterility
Transgenes
Transgenic plants
title Cloning and Characterization of a Second form of the Rice Adenine Phosphoribosyl Transferase Gene (OsAPT2) and its Association with TGMS
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