Molecular recycling within amyloid fibrils

• Published in: Nature 2005-07, Vol.436 (7050), p.554-558
• Main Authors: Dobson, Christopher M, Carulla, Natàlia, Caddy, Gemma L, Hall, Damien R, Zurdo, Jesús, Gairí, Margarida, Feliz, Miguel, Giralt, Ernest, Robinson, Carol V
• Format: Article
• Language: English
• Subjects: Amyloid - chemistry; Amyloid - metabolism; Amyloid - ultrastructure; Analytical, structural and metabolic biochemistry; Animals; Biological and medical sciences; Cattle; Deuterium; Deuterium Exchange Measurement; Fundamental and applied biological sciences. Psychology; General aspects, investigation methods; Humanities and Social Sciences; Hydrogen; Ionization; Kinetics; letter; Magnetic Resonance Spectroscopy; Mass spectrometry; Models, Chemical; Molecular biology; multidisciplinary; NMR; Nuclear magnetic resonance; Phosphatidylinositol 3-Kinases - chemistry; Phosphatidylinositol 3-Kinases - metabolism; Phosphatidylinositol 3-Kinases - ultrastructure; Protein Subunits - chemistry; Protein Subunits - metabolism; Proteins; Recycling; Science; Spectrometry, Mass, Electrospray Ionization; Spectrum analysis; src Homology Domains
• ISSN: 0028-0836; 1476-4687
• DOI: 10.1038/nature03986

Amyloid fibrils are thread-like protein aggregates with a core region formed from repetitive arrays of β-sheets oriented parallel to the fibril axis. Such structures were first recognized in clinical disorders, but more recently have also been linked to a variety of non-pathogenic phenomena ranging from the transfer of genetic information to synaptic changes associated with memory. The observation that many proteins can convert into similar structures in vitro has suggested that this ability is a generic feature of polypeptide chains. Here we have probed the nature of the amyloid structure by monitoring hydrogen/deuterium exchange in fibrils formed from an SH3 domain using a combination of nuclear magnetic resonance spectroscopy and electrospray ionization mass spectrometry. The results reveal that under the conditions used in this study, exchange is dominated by a mechanism of dissociation and re-association that results in the recycling of molecules within the fibril population. This insight into the dynamic nature of amyloid fibrils, and the ability to determine the parameters that define this behaviour, have important implications for the design of therapeutic strategies directed against amyloid disease.