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The giant fibrillar center: A nucleolar structure enriched in upstream binding factor (UBF) that appears in transcriptionally more active sensory ganglia neurons
This paper studies the molecular organization, neuronal distribution and cellular differentiation dynamics of the giant fibrillar centers (GFCs) of nucleoli in rat sensory ganglia neurons. The GFC appeared as a round nucleolar domain (1–2 μm in diameter) partially surrounded by the dense fibrillar c...
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Published in: | Journal of structural biology 2007-09, Vol.159 (3), p.451-461 |
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description | This paper studies the molecular organization, neuronal distribution and cellular differentiation dynamics of the giant fibrillar centers (GFCs) of nucleoli in rat sensory ganglia neurons. The GFC appeared as a round nucleolar domain (1–2
μm in diameter) partially surrounded by the dense fibrillar component and accompanied by numerous small FCs. By immunocytochemistry, the GFC concentrated the upstream binding factor, which may serve as a marker of this structure, and also contain RNA polymerase I, DNA topoisomerase I, SUMO-1 and Ubc9. However, they lack ubiquitin–proteasome conjugates and 20S proteasome. Transcription assay with 5′-fluorouridine incorporation revealed the presence of nascent RNA on the dense fibrillar component of the neuronal nucleolus, but not within the low electron-density area of the GFC. The formation of GFCs is neuronal size dependent: they were found in 58%, 30% and 0% of the large, medium and small neurons, respectively. GFCs first appeared during the postnatal period, concomitantly with a stage of neuronal growth, myelination and bioelectrical maturation. GFCs were not observed in segregated nucleoli induced by severe inhibition of RNA synthesis. We suggest that the formation of GFCs is associated with a high rate of ribosome biogenesis of the transcriptionally more active large-size neurons. |
doi_str_mv | 10.1016/j.jsb.2007.05.004 |
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μm in diameter) partially surrounded by the dense fibrillar component and accompanied by numerous small FCs. By immunocytochemistry, the GFC concentrated the upstream binding factor, which may serve as a marker of this structure, and also contain RNA polymerase I, DNA topoisomerase I, SUMO-1 and Ubc9. However, they lack ubiquitin–proteasome conjugates and 20S proteasome. Transcription assay with 5′-fluorouridine incorporation revealed the presence of nascent RNA on the dense fibrillar component of the neuronal nucleolus, but not within the low electron-density area of the GFC. The formation of GFCs is neuronal size dependent: they were found in 58%, 30% and 0% of the large, medium and small neurons, respectively. GFCs first appeared during the postnatal period, concomitantly with a stage of neuronal growth, myelination and bioelectrical maturation. GFCs were not observed in segregated nucleoli induced by severe inhibition of RNA synthesis. We suggest that the formation of GFCs is associated with a high rate of ribosome biogenesis of the transcriptionally more active large-size neurons.</description><identifier>ISSN: 1047-8477</identifier><identifier>EISSN: 1095-8657</identifier><identifier>DOI: 10.1016/j.jsb.2007.05.004</identifier><identifier>PMID: 17587596</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>5′-Fluorouridine transcription assay ; Animals ; Cajal bodies ; Cell Differentiation ; Cell Nucleolus - chemistry ; Cell Nucleolus - ultrastructure ; Ganglia, Sensory - growth & development ; Ganglia, Sensory - metabolism ; Ganglia, Sensory - ultrastructure ; Giant fibrillar centers ; Male ; Microscopy, Immunoelectron ; Neuronal differentiation ; Neurons, Afferent - metabolism ; Neurons, Afferent - ultrastructure ; Nucleolus ; Pol1 Transcription Initiation Complex Proteins - analysis ; Proteasome Endopeptidase Complex - analysis ; Proteasome Endopeptidase Complex - metabolism ; Rats ; Rats, Sprague-Dawley ; RNA, Ribosomal - analysis ; RNA, Ribosomal - metabolism ; Sensory ganglia neurons ; SUMO-1 ; SUMO-1 Protein - analysis ; SUMO-1 Protein - metabolism ; Transcription, Genetic ; UBF ; Ubiquitin - analysis ; Ubiquitin - metabolism ; Ubiquitin–proteasome system</subject><ispartof>Journal of structural biology, 2007-09, Vol.159 (3), p.451-461</ispartof><rights>2007 Elsevier Inc.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c351t-21a9f73f8bcb18e0c6bc276a6a3fbe28363847e37a29c92cb2376b401c7df0763</citedby><cites>FETCH-LOGICAL-c351t-21a9f73f8bcb18e0c6bc276a6a3fbe28363847e37a29c92cb2376b401c7df0763</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/17587596$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Casafont, Iñigo</creatorcontrib><creatorcontrib>Bengoechea, Rocio</creatorcontrib><creatorcontrib>Navascués, Joaquín</creatorcontrib><creatorcontrib>Pena, Emma</creatorcontrib><creatorcontrib>Berciano, Maria T.</creatorcontrib><creatorcontrib>Lafarga, Miguel</creatorcontrib><title>The giant fibrillar center: A nucleolar structure enriched in upstream binding factor (UBF) that appears in transcriptionally more active sensory ganglia neurons</title><title>Journal of structural biology</title><addtitle>J Struct Biol</addtitle><description>This paper studies the molecular organization, neuronal distribution and cellular differentiation dynamics of the giant fibrillar centers (GFCs) of nucleoli in rat sensory ganglia neurons. The GFC appeared as a round nucleolar domain (1–2
μm in diameter) partially surrounded by the dense fibrillar component and accompanied by numerous small FCs. By immunocytochemistry, the GFC concentrated the upstream binding factor, which may serve as a marker of this structure, and also contain RNA polymerase I, DNA topoisomerase I, SUMO-1 and Ubc9. However, they lack ubiquitin–proteasome conjugates and 20S proteasome. Transcription assay with 5′-fluorouridine incorporation revealed the presence of nascent RNA on the dense fibrillar component of the neuronal nucleolus, but not within the low electron-density area of the GFC. The formation of GFCs is neuronal size dependent: they were found in 58%, 30% and 0% of the large, medium and small neurons, respectively. GFCs first appeared during the postnatal period, concomitantly with a stage of neuronal growth, myelination and bioelectrical maturation. GFCs were not observed in segregated nucleoli induced by severe inhibition of RNA synthesis. We suggest that the formation of GFCs is associated with a high rate of ribosome biogenesis of the transcriptionally more active large-size neurons.</description><subject>5′-Fluorouridine transcription assay</subject><subject>Animals</subject><subject>Cajal bodies</subject><subject>Cell Differentiation</subject><subject>Cell Nucleolus - chemistry</subject><subject>Cell Nucleolus - ultrastructure</subject><subject>Ganglia, Sensory - growth & development</subject><subject>Ganglia, Sensory - metabolism</subject><subject>Ganglia, Sensory - ultrastructure</subject><subject>Giant fibrillar centers</subject><subject>Male</subject><subject>Microscopy, Immunoelectron</subject><subject>Neuronal differentiation</subject><subject>Neurons, Afferent - metabolism</subject><subject>Neurons, Afferent - ultrastructure</subject><subject>Nucleolus</subject><subject>Pol1 Transcription Initiation Complex Proteins - analysis</subject><subject>Proteasome Endopeptidase Complex - analysis</subject><subject>Proteasome Endopeptidase Complex - metabolism</subject><subject>Rats</subject><subject>Rats, Sprague-Dawley</subject><subject>RNA, Ribosomal - analysis</subject><subject>RNA, Ribosomal - metabolism</subject><subject>Sensory ganglia neurons</subject><subject>SUMO-1</subject><subject>SUMO-1 Protein - analysis</subject><subject>SUMO-1 Protein - metabolism</subject><subject>Transcription, Genetic</subject><subject>UBF</subject><subject>Ubiquitin - analysis</subject><subject>Ubiquitin - metabolism</subject><subject>Ubiquitin–proteasome system</subject><issn>1047-8477</issn><issn>1095-8657</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2007</creationdate><recordtype>article</recordtype><recordid>eNp9kc2O1DAQhCMEYn_gAbggnxAcEuwkthM4LatdQFqJy-7Zsp3OjEeJHdrOSvM4vCmOZiRunLrV-qqkriqKd4xWjDLx-VAdoqlqSmVFeUVp-6K4ZLTnZSe4fLntrSy7VsqL4irGA80Eq9nr4oJJ3knei8viz-MeyM5pn8joDLpp0kgs-AT4hdwQv9oJwnaLCVebVgQCHp3dw0CcJ-uS76BnYpwfnN-RUdsUkHx8-nb_iaS9TkQvC2iMG51Q-2jRLckFr6fpSOaQDbPEPQOJ4GPAI9lpv5ucJh5WDD6-KV6Neorw9jyvi6f7u8fbH-XDr-8_b28eSttwlsqa6X6UzdgZa1gH1Apjaym00M1ooO4a0eQkoJG67m1fW1M3UpiWMiuHkUrRXBcfTr4Lht8rxKRmFy3kQDyENSrR1Vwy3maQnUCLIUaEUS3oZo1HxajaelEHlXtRWy-KcpVTz5r3Z_PVzDD8U5yLyMDXEwD5xWcHqKJ14C0MDsEmNQT3H_u_iuKhmQ</recordid><startdate>20070901</startdate><enddate>20070901</enddate><creator>Casafont, Iñigo</creator><creator>Bengoechea, Rocio</creator><creator>Navascués, Joaquín</creator><creator>Pena, Emma</creator><creator>Berciano, Maria T.</creator><creator>Lafarga, Miguel</creator><general>Elsevier Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20070901</creationdate><title>The giant fibrillar center: A nucleolar structure enriched in upstream binding factor (UBF) that appears in transcriptionally more active sensory ganglia neurons</title><author>Casafont, Iñigo ; Bengoechea, Rocio ; Navascués, Joaquín ; Pena, Emma ; Berciano, Maria T. ; Lafarga, Miguel</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c351t-21a9f73f8bcb18e0c6bc276a6a3fbe28363847e37a29c92cb2376b401c7df0763</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2007</creationdate><topic>5′-Fluorouridine transcription assay</topic><topic>Animals</topic><topic>Cajal bodies</topic><topic>Cell Differentiation</topic><topic>Cell Nucleolus - chemistry</topic><topic>Cell Nucleolus - ultrastructure</topic><topic>Ganglia, Sensory - growth & development</topic><topic>Ganglia, Sensory - metabolism</topic><topic>Ganglia, Sensory - ultrastructure</topic><topic>Giant fibrillar centers</topic><topic>Male</topic><topic>Microscopy, Immunoelectron</topic><topic>Neuronal differentiation</topic><topic>Neurons, Afferent - metabolism</topic><topic>Neurons, Afferent - ultrastructure</topic><topic>Nucleolus</topic><topic>Pol1 Transcription Initiation Complex Proteins - analysis</topic><topic>Proteasome Endopeptidase Complex - analysis</topic><topic>Proteasome Endopeptidase Complex - metabolism</topic><topic>Rats</topic><topic>Rats, Sprague-Dawley</topic><topic>RNA, Ribosomal - analysis</topic><topic>RNA, Ribosomal - metabolism</topic><topic>Sensory ganglia neurons</topic><topic>SUMO-1</topic><topic>SUMO-1 Protein - analysis</topic><topic>SUMO-1 Protein - metabolism</topic><topic>Transcription, Genetic</topic><topic>UBF</topic><topic>Ubiquitin - analysis</topic><topic>Ubiquitin - metabolism</topic><topic>Ubiquitin–proteasome system</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Casafont, Iñigo</creatorcontrib><creatorcontrib>Bengoechea, Rocio</creatorcontrib><creatorcontrib>Navascués, Joaquín</creatorcontrib><creatorcontrib>Pena, Emma</creatorcontrib><creatorcontrib>Berciano, Maria T.</creatorcontrib><creatorcontrib>Lafarga, Miguel</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of structural biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Casafont, Iñigo</au><au>Bengoechea, Rocio</au><au>Navascués, Joaquín</au><au>Pena, Emma</au><au>Berciano, Maria T.</au><au>Lafarga, Miguel</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The giant fibrillar center: A nucleolar structure enriched in upstream binding factor (UBF) that appears in transcriptionally more active sensory ganglia neurons</atitle><jtitle>Journal of structural biology</jtitle><addtitle>J Struct Biol</addtitle><date>2007-09-01</date><risdate>2007</risdate><volume>159</volume><issue>3</issue><spage>451</spage><epage>461</epage><pages>451-461</pages><issn>1047-8477</issn><eissn>1095-8657</eissn><abstract>This paper studies the molecular organization, neuronal distribution and cellular differentiation dynamics of the giant fibrillar centers (GFCs) of nucleoli in rat sensory ganglia neurons. The GFC appeared as a round nucleolar domain (1–2
μm in diameter) partially surrounded by the dense fibrillar component and accompanied by numerous small FCs. By immunocytochemistry, the GFC concentrated the upstream binding factor, which may serve as a marker of this structure, and also contain RNA polymerase I, DNA topoisomerase I, SUMO-1 and Ubc9. However, they lack ubiquitin–proteasome conjugates and 20S proteasome. Transcription assay with 5′-fluorouridine incorporation revealed the presence of nascent RNA on the dense fibrillar component of the neuronal nucleolus, but not within the low electron-density area of the GFC. The formation of GFCs is neuronal size dependent: they were found in 58%, 30% and 0% of the large, medium and small neurons, respectively. GFCs first appeared during the postnatal period, concomitantly with a stage of neuronal growth, myelination and bioelectrical maturation. GFCs were not observed in segregated nucleoli induced by severe inhibition of RNA synthesis. We suggest that the formation of GFCs is associated with a high rate of ribosome biogenesis of the transcriptionally more active large-size neurons.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>17587596</pmid><doi>10.1016/j.jsb.2007.05.004</doi><tpages>11</tpages></addata></record> |
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subjects | 5′-Fluorouridine transcription assay Animals Cajal bodies Cell Differentiation Cell Nucleolus - chemistry Cell Nucleolus - ultrastructure Ganglia, Sensory - growth & development Ganglia, Sensory - metabolism Ganglia, Sensory - ultrastructure Giant fibrillar centers Male Microscopy, Immunoelectron Neuronal differentiation Neurons, Afferent - metabolism Neurons, Afferent - ultrastructure Nucleolus Pol1 Transcription Initiation Complex Proteins - analysis Proteasome Endopeptidase Complex - analysis Proteasome Endopeptidase Complex - metabolism Rats Rats, Sprague-Dawley RNA, Ribosomal - analysis RNA, Ribosomal - metabolism Sensory ganglia neurons SUMO-1 SUMO-1 Protein - analysis SUMO-1 Protein - metabolism Transcription, Genetic UBF Ubiquitin - analysis Ubiquitin - metabolism Ubiquitin–proteasome system |
title | The giant fibrillar center: A nucleolar structure enriched in upstream binding factor (UBF) that appears in transcriptionally more active sensory ganglia neurons |
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