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Loop-mediated isothermal amplification for rapid detection of Bacillus anthracis spores
A loop-mediated isothermal amplification (LAMP) assay system was employed for detecting Bacillus anthracis spores in pure cultures as well as in various simulated powder samples. The specificity of the designed LAMP primer sets was validated by assaying 13 B. anthracis strains and 33 non-B. anthraci...
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Published in: | Biotechnology letters 2007-12, Vol.29 (12), p.1939-1946 |
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cited_by | cdi_FETCH-LOGICAL-c446t-b13308dce563927b76b64592c7efa821e08047169eeb313d2e8206fe0ffa5e6b3 |
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cites | cdi_FETCH-LOGICAL-c446t-b13308dce563927b76b64592c7efa821e08047169eeb313d2e8206fe0ffa5e6b3 |
container_end_page | 1946 |
container_issue | 12 |
container_start_page | 1939 |
container_title | Biotechnology letters |
container_volume | 29 |
creator | Qiao, Yan-Mei Guo, Yong-Chao Zhang, Xian-En Zhou, Ya-Feng Zhang, Zhi-Ping Wei, Hong-Ping Yang, Rui-Fu Wang, Dian-Bing |
description | A loop-mediated isothermal amplification (LAMP) assay system was employed for detecting Bacillus anthracis spores in pure cultures as well as in various simulated powder samples. The specificity of the designed LAMP primer sets was validated by assaying 13 B. anthracis strains and 33 non-B. anthracis species. The detection limits of the LAMP assay were 10 spores/tube for pure cultures and 100 spores/2 mg powder for simulated powder samples. The results show that the LAMP protocol is a promising method for detecting B. anthracis. |
doi_str_mv | 10.1007/s10529-007-9472-9 |
format | article |
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The specificity of the designed LAMP primer sets was validated by assaying 13 B. anthracis strains and 33 non-B. anthracis species. The detection limits of the LAMP assay were 10 spores/tube for pure cultures and 100 spores/2 mg powder for simulated powder samples. The results show that the LAMP protocol is a promising method for detecting B. anthracis.</description><identifier>ISSN: 0141-5492</identifier><identifier>EISSN: 1573-6776</identifier><identifier>DOI: 10.1007/s10529-007-9472-9</identifier><identifier>PMID: 17673950</identifier><identifier>CODEN: BILED3</identifier><language>eng</language><publisher>Dordrecht: Dordrecht : Springer Netherlands</publisher><subject>Bacillus anthracis ; Bacillus anthracis - genetics ; Bacillus anthracis - isolation & purification ; Bacteria ; Biological and medical sciences ; Biotechnology ; detection ; Detection limits ; DNA, Bacterial - analysis ; DNA, Bacterial - genetics ; Electrophoresis, Agar Gel ; Fluorescent Dyes - metabolism ; Fundamental and applied biological sciences. Psychology ; Isothermal amplification ; LAMP ; Microbiology ; Nucleic Acid Amplification Techniques - methods ; Powders ; Restriction Mapping ; Spores, Bacterial - genetics ; Spores, Bacterial - isolation & purification</subject><ispartof>Biotechnology letters, 2007-12, Vol.29 (12), p.1939-1946</ispartof><rights>2008 INIST-CNRS</rights><rights>Springer Science+Business Media B.V. 2007</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c446t-b13308dce563927b76b64592c7efa821e08047169eeb313d2e8206fe0ffa5e6b3</citedby><cites>FETCH-LOGICAL-c446t-b13308dce563927b76b64592c7efa821e08047169eeb313d2e8206fe0ffa5e6b3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=19373676$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/17673950$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Qiao, Yan-Mei</creatorcontrib><creatorcontrib>Guo, Yong-Chao</creatorcontrib><creatorcontrib>Zhang, Xian-En</creatorcontrib><creatorcontrib>Zhou, Ya-Feng</creatorcontrib><creatorcontrib>Zhang, Zhi-Ping</creatorcontrib><creatorcontrib>Wei, Hong-Ping</creatorcontrib><creatorcontrib>Yang, Rui-Fu</creatorcontrib><creatorcontrib>Wang, Dian-Bing</creatorcontrib><title>Loop-mediated isothermal amplification for rapid detection of Bacillus anthracis spores</title><title>Biotechnology letters</title><addtitle>Biotechnol Lett</addtitle><description>A loop-mediated isothermal amplification (LAMP) assay system was employed for detecting Bacillus anthracis spores in pure cultures as well as in various simulated powder samples. 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Psychology</topic><topic>Isothermal amplification</topic><topic>LAMP</topic><topic>Microbiology</topic><topic>Nucleic Acid Amplification Techniques - methods</topic><topic>Powders</topic><topic>Restriction Mapping</topic><topic>Spores, Bacterial - genetics</topic><topic>Spores, Bacterial - isolation & purification</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Qiao, Yan-Mei</creatorcontrib><creatorcontrib>Guo, Yong-Chao</creatorcontrib><creatorcontrib>Zhang, Xian-En</creatorcontrib><creatorcontrib>Zhou, Ya-Feng</creatorcontrib><creatorcontrib>Zhang, Zhi-Ping</creatorcontrib><creatorcontrib>Wei, Hong-Ping</creatorcontrib><creatorcontrib>Yang, Rui-Fu</creatorcontrib><creatorcontrib>Wang, Dian-Bing</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Chemoreception Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Mechanical & Transportation Engineering Abstracts</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>Health & Medical Collection (ProQuest Medical & Health Databases)</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Science Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Technology Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Materials Science & Engineering Collection</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>AUTh Library subscriptions: ProQuest Central</collection><collection>Technology Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Engineering Collection</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>PML(ProQuest Medical Library)</collection><collection>ProQuest Science Journals</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>ProQuest Biological Science Journals</collection><collection>Engineering Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>Engineering collection</collection><collection>ProQuest Central Basic</collection><collection>MEDLINE - Academic</collection><jtitle>Biotechnology letters</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Qiao, Yan-Mei</au><au>Guo, Yong-Chao</au><au>Zhang, Xian-En</au><au>Zhou, Ya-Feng</au><au>Zhang, Zhi-Ping</au><au>Wei, Hong-Ping</au><au>Yang, Rui-Fu</au><au>Wang, Dian-Bing</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Loop-mediated isothermal amplification for rapid detection of Bacillus anthracis spores</atitle><jtitle>Biotechnology letters</jtitle><addtitle>Biotechnol Lett</addtitle><date>2007-12-01</date><risdate>2007</risdate><volume>29</volume><issue>12</issue><spage>1939</spage><epage>1946</epage><pages>1939-1946</pages><issn>0141-5492</issn><eissn>1573-6776</eissn><coden>BILED3</coden><abstract>A loop-mediated isothermal amplification (LAMP) assay system was employed for detecting Bacillus anthracis spores in pure cultures as well as in various simulated powder samples. The specificity of the designed LAMP primer sets was validated by assaying 13 B. anthracis strains and 33 non-B. anthracis species. The detection limits of the LAMP assay were 10 spores/tube for pure cultures and 100 spores/2 mg powder for simulated powder samples. The results show that the LAMP protocol is a promising method for detecting B. anthracis.</abstract><cop>Dordrecht</cop><pub>Dordrecht : Springer Netherlands</pub><pmid>17673950</pmid><doi>10.1007/s10529-007-9472-9</doi><tpages>8</tpages></addata></record> |
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subjects | Bacillus anthracis Bacillus anthracis - genetics Bacillus anthracis - isolation & purification Bacteria Biological and medical sciences Biotechnology detection Detection limits DNA, Bacterial - analysis DNA, Bacterial - genetics Electrophoresis, Agar Gel Fluorescent Dyes - metabolism Fundamental and applied biological sciences. Psychology Isothermal amplification LAMP Microbiology Nucleic Acid Amplification Techniques - methods Powders Restriction Mapping Spores, Bacterial - genetics Spores, Bacterial - isolation & purification |
title | Loop-mediated isothermal amplification for rapid detection of Bacillus anthracis spores |
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