Integrative Array Analyzer: a software package for analysis of cross-platform and cross-species microarray data

• Published in: Bioinformatics 2006-07, Vol.22 (13), p.1665-1667
• Main Authors: Pan, Fei, Kamath, Kiran, Zhang, Kangyu, Pulapura, Sudip, Achar, Avinash, Nunez-Iglesias, Juan, Huang, Yu, Yan, Xifeng, Han, Jiawei, Hu, Haiyan, Xu, Min, Hu, Jianjun, Zhou, Xianghong Jasmine
• Format: Article
• Language: English
• Subjects: Algorithms; Animals; Biological and medical sciences; Computational Biology - methods; Computer Graphics; Data Interpretation, Statistical; Fundamental and applied biological sciences. Psychology; Gene Expression Profiling; Gene Expression Regulation; General aspects; Humans; Internet; Mathematics in biology. Statistical analysis. Models. Metrology. Data processing in biology (general aspects); Oligonucleotide Array Sequence Analysis - methods; Software; Species Specificity
• ISSN: 1367-4803; 1460-2059; 1367-4811
• DOI: 10.1093/bioinformatics/btl163

The rapid accumulation of microarray data translates into an urgent need for tools to perform integrative microarray analysis. Integrative Array Analyzer is a comprehensive analysis and visualization software toolkit, which aims to facilitate the reuse of the large amount of cross-platform and cross-species microarray data. It is composed of the data preprocess module, the co-expression analysis module, the differential expression analysis module, the functional and transcriptional annotation module and the graph visualization module. Availability: Contact:[e-mail]