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Integrative Array Analyzer: a software package for analysis of cross-platform and cross-species microarray data

The rapid accumulation of microarray data translates into an urgent need for tools to perform integrative microarray analysis. Integrative Array Analyzer is a comprehensive analysis and visualization software toolkit, which aims to facilitate the reuse of the large amount of cross-platform and cross...

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Published in:	Bioinformatics 2006-07, Vol.22 (13), p.1665-1667
Main Authors:	Pan, Fei, Kamath, Kiran, Zhang, Kangyu, Pulapura, Sudip, Achar, Avinash, Nunez-Iglesias, Juan, Huang, Yu, Yan, Xifeng, Han, Jiawei, Hu, Haiyan, Xu, Min, Hu, Jianjun, Zhou, Xianghong Jasmine
Format:	Article
Language:	English
Subjects:	Algorithms Animals Biological and medical sciences Computational Biology - methods Computer Graphics Data Interpretation, Statistical Fundamental and applied biological sciences. Psychology Gene Expression Profiling Gene Expression Regulation General aspects Humans Internet Mathematics in biology. Statistical analysis. Models. Metrology. Data processing in biology (general aspects) Oligonucleotide Array Sequence Analysis - methods Software Species Specificity
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creator	Pan, Fei Kamath, Kiran Zhang, Kangyu Pulapura, Sudip Achar, Avinash Nunez-Iglesias, Juan Huang, Yu Yan, Xifeng Han, Jiawei Hu, Haiyan Xu, Min Hu, Jianjun Zhou, Xianghong Jasmine
description	The rapid accumulation of microarray data translates into an urgent need for tools to perform integrative microarray analysis. Integrative Array Analyzer is a comprehensive analysis and visualization software toolkit, which aims to facilitate the reuse of the large amount of cross-platform and cross-species microarray data. It is composed of the data preprocess module, the co-expression analysis module, the differential expression analysis module, the functional and transcriptional annotation module and the graph visualization module. Availability: Contact:xjzhou@usc.edu
doi_str_mv	10.1093/bioinformatics/btl163
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subjects	Algorithms Animals Biological and medical sciences Computational Biology - methods Computer Graphics Data Interpretation, Statistical Fundamental and applied biological sciences. Psychology Gene Expression Profiling Gene Expression Regulation General aspects Humans Internet Mathematics in biology. Statistical analysis. Models. Metrology. Data processing in biology (general aspects) Oligonucleotide Array Sequence Analysis - methods Software Species Specificity
title	Integrative Array Analyzer: a software package for analysis of cross-platform and cross-species microarray data
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