arrayQCplot: software for checking the quality of microarray data

arrayQCplot is a software for the exploratory analysis of microarray data. This software focuses on quality control and generates newly developed plots for quality and reproducibility checks. It is developed using R and provides a user-friendly graphical interface for graphics and statistical analys...

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Bibliographic Details
Published in:Bioinformatics 2006-09, Vol.22 (18), p.2305-2307
Main Authors: Lee, Eun-Kyung, Yi, Sung-Gon, Park, Taesung
Format: Article
Language:English
Subjects:
Algorithms
Biological and medical sciences
Computer Graphics
Data Interpretation, Statistical
Fundamental and applied biological sciences. Psychology
General aspects
Mathematics in biology. Statistical analysis. Models. Metrology. Data processing in biology (general aspects)
Oligonucleotide Array Sequence Analysis - methods
Quality Control
Reproducibility of Results
Sensitivity and Specificity
Software
User-Computer Interface
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Description
Summary:arrayQCplot is a software for the exploratory analysis of microarray data. This software focuses on quality control and generates newly developed plots for quality and reproducibility checks. It is developed using R and provides a user-friendly graphical interface for graphics and statistical analysis. Therefore, novice users will find arrayQCplot as an easy-to-use software for checking the quality of their data by a simple mouse click. Availability: arrayQCplot software is available from Bioconductor at A more detailed manual is available at Contact:tspark@stats.snu.ac.kr
ISSN:1367-4803
1460-2059
1367-4811
DOI:10.1093/bioinformatics/btl367