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Proton Transfer 200 Years after von Grotthuss: Insights from Ab Initio Simulations
In the last decade, ab initio simulations and especially Car–Parrinello molecular dynamics have significantly contributed to the improvement of our understanding of both the physical and chemical properties of water, ice, and hydrogen‐bonded systems in general. At the heart of this family of in sili...
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Published in: | Chemphyschem 2006-09, Vol.7 (9), p.1848-1870 |
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container_end_page | 1870 |
container_issue | 9 |
container_start_page | 1848 |
container_title | Chemphyschem |
container_volume | 7 |
creator | Marx, Dominik |
description | In the last decade, ab initio simulations and especially Car–Parrinello molecular dynamics have significantly contributed to the improvement of our understanding of both the physical and chemical properties of water, ice, and hydrogen‐bonded systems in general. At the heart of this family of in silico techniques lies the crucial idea of computing the many‐body interactions by solving the electronic structure problem “on the fly” as the simulation proceeds, which circumvents the need for pre‐parameterized potential models. In particular, the field of proton transfer in hydrogen‐bonded networks greatly benefits from these technical advances. Here, several systems of seemingly quite different nature and of increasing complexity, such as Grotthuss diffusion in water, excited‐state proton‐transfer in solution, phase transitions in ice, and protonated water networks in the membrane protein bacteriorhodopsin, are discussed in the realms of a unifying viewpoint.
Ubiquitous proton transfer reactions in hydrogen‐bonded networks are at the heart of a wealth of phenomena that connect chemistry to both physics and biology at the molecular level. Finite‐temperature ab initio or Car–Parrinello simulations play a vital role in helping to understand these phenomena. In this Review, a selection of such studies is discussed. |
doi_str_mv | 10.1002/cphc.200600128 |
format | article |
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Ubiquitous proton transfer reactions in hydrogen‐bonded networks are at the heart of a wealth of phenomena that connect chemistry to both physics and biology at the molecular level. Finite‐temperature ab initio or Car–Parrinello simulations play a vital role in helping to understand these phenomena. In this Review, a selection of such studies is discussed.</description><identifier>ISSN: 1439-4235</identifier><identifier>EISSN: 1439-7641</identifier><identifier>DOI: 10.1002/cphc.200600128</identifier><identifier>PMID: 16929553</identifier><language>eng</language><publisher>Weinheim: WILEY-VCH Verlag</publisher><subject>Ab initio calculations ; Atomic and molecular physics ; Calculations and mathematical techniques in atomic and molecular physics (excluding electron correlation calculations) ; Electronic structure of atoms, molecules and their ions: theory ; Exact sciences and technology ; hydrogen bonds ; isotope effects ; molecular dynamics ; Molecular dynamics and other numerical methods ; Physics ; proton transport</subject><ispartof>Chemphyschem, 2006-09, Vol.7 (9), p.1848-1870</ispartof><rights>Copyright © 2006 WILEY‐VCH Verlag GmbH & Co. KGaA, Weinheim</rights><rights>2007 INIST-CNRS</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4778-ad94253c8c97a8e2ecdcc75c26d0fff49279832a4bb76e0f0a69fb770d550ab83</citedby><cites>FETCH-LOGICAL-c4778-ad94253c8c97a8e2ecdcc75c26d0fff49279832a4bb76e0f0a69fb770d550ab83</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27901,27902</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=18097016$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/16929553$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Marx, Dominik</creatorcontrib><title>Proton Transfer 200 Years after von Grotthuss: Insights from Ab Initio Simulations</title><title>Chemphyschem</title><addtitle>ChemPhysChem</addtitle><description>In the last decade, ab initio simulations and especially Car–Parrinello molecular dynamics have significantly contributed to the improvement of our understanding of both the physical and chemical properties of water, ice, and hydrogen‐bonded systems in general. At the heart of this family of in silico techniques lies the crucial idea of computing the many‐body interactions by solving the electronic structure problem “on the fly” as the simulation proceeds, which circumvents the need for pre‐parameterized potential models. In particular, the field of proton transfer in hydrogen‐bonded networks greatly benefits from these technical advances. Here, several systems of seemingly quite different nature and of increasing complexity, such as Grotthuss diffusion in water, excited‐state proton‐transfer in solution, phase transitions in ice, and protonated water networks in the membrane protein bacteriorhodopsin, are discussed in the realms of a unifying viewpoint.
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Ubiquitous proton transfer reactions in hydrogen‐bonded networks are at the heart of a wealth of phenomena that connect chemistry to both physics and biology at the molecular level. Finite‐temperature ab initio or Car–Parrinello simulations play a vital role in helping to understand these phenomena. In this Review, a selection of such studies is discussed.</abstract><cop>Weinheim</cop><pub>WILEY-VCH Verlag</pub><pmid>16929553</pmid><doi>10.1002/cphc.200600128</doi><tpages>23</tpages></addata></record> |
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subjects | Ab initio calculations Atomic and molecular physics Calculations and mathematical techniques in atomic and molecular physics (excluding electron correlation calculations) Electronic structure of atoms, molecules and their ions: theory Exact sciences and technology hydrogen bonds isotope effects molecular dynamics Molecular dynamics and other numerical methods Physics proton transport |
title | Proton Transfer 200 Years after von Grotthuss: Insights from Ab Initio Simulations |
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