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alpha 1-antitrypsin TAQ I polymorphism and alpha 1-antichymotrypsin mutations in patients with obstructive pulmonary disease
Obstructive pulmonary disease is a multifactorial condition deriving from the interaction of environmental and genetic factors. From biochemical knowledge of the basis of the disease, alpha 1-antitrypsin and alpha 1-antichymotrypsin are considered two likely candidate genes. We therefore designed an...
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Published in: | Respiratory medicine 1999-09, Vol.93 (9), p.648-654 |
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creator | Benetazzo, M G Gilè, L S Bombieri, C Malerba, G Massobrio, M Pignatti, P F Luisetti, M |
description | Obstructive pulmonary disease is a multifactorial condition deriving from the interaction of environmental and genetic factors. From biochemical knowledge of the basis of the disease, alpha 1-antitrypsin and alpha 1-antichymotrypsin are considered two likely candidate genes. We therefore designed an association study comprising 232 unrelated Italian individuals divided as follows: 89 individuals with obstructive lung disease (66 with COPD and 23 with disseminated bronchiectasis) and 143 controls (45 patients with non-obstructive lung disease and 98 healthy individuals). We screened for Taq I (G1237A) polymorphism of the alpha 1-antitrypsin gene as well as the rare variants Bonn-1 (Pro229Ala), Bochum-1 (Leu55Pro), Isehara-1 (Met389Val) and Isehara-2 (1258delAA), and the common signal peptide polymorphism Thr-15Ala of the alpha 1-antichymotrypsin gene. The frequencies of Taq I G1237A alleles were 11.7 and 10.8% in obstructed patients and controls, respectively (P = 0.43), while those of signal peptide Thr-15Ala alleles were 51.6 and 50.3% in obstructed patients and controls, respectively (P = 0.42). We conclude that alpha 1-antitrypsin Taq I polymorphism and alpha 1-antichymotrypsin Thr-15Ala mutation are not major genetic risk factors for the development of obstructive lung disease in Italian patients. The alpha 1-antichymotrypsin rare variants were not detected: our results do not exclude the possibility that other alpha 1-antichymotrypsin gene mutations might be present in Italian obstructed patients but, if so, these genetic defects must be rare. |
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From biochemical knowledge of the basis of the disease, alpha 1-antitrypsin and alpha 1-antichymotrypsin are considered two likely candidate genes. We therefore designed an association study comprising 232 unrelated Italian individuals divided as follows: 89 individuals with obstructive lung disease (66 with COPD and 23 with disseminated bronchiectasis) and 143 controls (45 patients with non-obstructive lung disease and 98 healthy individuals). We screened for Taq I (G1237A) polymorphism of the alpha 1-antitrypsin gene as well as the rare variants Bonn-1 (Pro229Ala), Bochum-1 (Leu55Pro), Isehara-1 (Met389Val) and Isehara-2 (1258delAA), and the common signal peptide polymorphism Thr-15Ala of the alpha 1-antichymotrypsin gene. The frequencies of Taq I G1237A alleles were 11.7 and 10.8% in obstructed patients and controls, respectively (P = 0.43), while those of signal peptide Thr-15Ala alleles were 51.6 and 50.3% in obstructed patients and controls, respectively (P = 0.42). We conclude that alpha 1-antitrypsin Taq I polymorphism and alpha 1-antichymotrypsin Thr-15Ala mutation are not major genetic risk factors for the development of obstructive lung disease in Italian patients. The alpha 1-antichymotrypsin rare variants were not detected: our results do not exclude the possibility that other alpha 1-antichymotrypsin gene mutations might be present in Italian obstructed patients but, if so, these genetic defects must be rare.</description><identifier>ISSN: 0954-6111</identifier><identifier>PMID: 10542979</identifier><language>eng</language><publisher>England</publisher><subject>Aged ; alpha 1-Antichymotrypsin - genetics ; alpha 1-Antitrypsin - genetics ; Case-Control Studies ; Female ; Humans ; Italy ; Lung Diseases, Obstructive - genetics ; Male ; Middle Aged ; Polymorphism, Genetic ; Risk Factors</subject><ispartof>Respiratory medicine, 1999-09, Vol.93 (9), p.648-654</ispartof><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,777,781</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/10542979$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Benetazzo, M G</creatorcontrib><creatorcontrib>Gilè, L S</creatorcontrib><creatorcontrib>Bombieri, C</creatorcontrib><creatorcontrib>Malerba, G</creatorcontrib><creatorcontrib>Massobrio, M</creatorcontrib><creatorcontrib>Pignatti, P F</creatorcontrib><creatorcontrib>Luisetti, M</creatorcontrib><title>alpha 1-antitrypsin TAQ I polymorphism and alpha 1-antichymotrypsin mutations in patients with obstructive pulmonary disease</title><title>Respiratory medicine</title><addtitle>Respir Med</addtitle><description>Obstructive pulmonary disease is a multifactorial condition deriving from the interaction of environmental and genetic factors. From biochemical knowledge of the basis of the disease, alpha 1-antitrypsin and alpha 1-antichymotrypsin are considered two likely candidate genes. We therefore designed an association study comprising 232 unrelated Italian individuals divided as follows: 89 individuals with obstructive lung disease (66 with COPD and 23 with disseminated bronchiectasis) and 143 controls (45 patients with non-obstructive lung disease and 98 healthy individuals). We screened for Taq I (G1237A) polymorphism of the alpha 1-antitrypsin gene as well as the rare variants Bonn-1 (Pro229Ala), Bochum-1 (Leu55Pro), Isehara-1 (Met389Val) and Isehara-2 (1258delAA), and the common signal peptide polymorphism Thr-15Ala of the alpha 1-antichymotrypsin gene. The frequencies of Taq I G1237A alleles were 11.7 and 10.8% in obstructed patients and controls, respectively (P = 0.43), while those of signal peptide Thr-15Ala alleles were 51.6 and 50.3% in obstructed patients and controls, respectively (P = 0.42). We conclude that alpha 1-antitrypsin Taq I polymorphism and alpha 1-antichymotrypsin Thr-15Ala mutation are not major genetic risk factors for the development of obstructive lung disease in Italian patients. The alpha 1-antichymotrypsin rare variants were not detected: our results do not exclude the possibility that other alpha 1-antichymotrypsin gene mutations might be present in Italian obstructed patients but, if so, these genetic defects must be rare.</description><subject>Aged</subject><subject>alpha 1-Antichymotrypsin - genetics</subject><subject>alpha 1-Antitrypsin - genetics</subject><subject>Case-Control Studies</subject><subject>Female</subject><subject>Humans</subject><subject>Italy</subject><subject>Lung Diseases, Obstructive - genetics</subject><subject>Male</subject><subject>Middle Aged</subject><subject>Polymorphism, Genetic</subject><subject>Risk Factors</subject><issn>0954-6111</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1999</creationdate><recordtype>article</recordtype><recordid>eNpNkMtqwzAQRbVoadK0v1C06s4gWZJjLUPoIxAoheyNJI-xivWoJbcY-vE1NIGu5h7uYRjmCq2JFLyoKKUrdJvSByFEck5u0IoSwUu5lWv0o4bYK0wL5bPN4xyT9fi0e8cHHMMwuzDG3iaHlW_xf9X0S3fx3ZRVtsEnvEBcIvic8LfNPQ465XEy2X4BjtPgglfjjFubQCW4Q9edGhLcn-cGnZ6fTvvX4vj2ctjvjkUUXBZ1q7jQpiIlBalAS80qMKRSjGvWUWGA6trQhbaSi84ws63Lsu2o1IS0pGIb9Pi3No7hc4KUG2eTgWFQHsKUmkqWJRNCLOLDWZy0g7aJo3XLuc3lXewXVzhovA</recordid><startdate>199909</startdate><enddate>199909</enddate><creator>Benetazzo, M G</creator><creator>Gilè, L S</creator><creator>Bombieri, C</creator><creator>Malerba, G</creator><creator>Massobrio, M</creator><creator>Pignatti, P F</creator><creator>Luisetti, M</creator><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>7X8</scope></search><sort><creationdate>199909</creationdate><title>alpha 1-antitrypsin TAQ I polymorphism and alpha 1-antichymotrypsin mutations in patients with obstructive pulmonary disease</title><author>Benetazzo, M G ; Gilè, L S ; Bombieri, C ; Malerba, G ; Massobrio, M ; Pignatti, P F ; Luisetti, M</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-p549-8da45bc6021e9aeb9b36ec06a34b3f15ce1b8c134b7945fc3c7822df19b00d063</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1999</creationdate><topic>Aged</topic><topic>alpha 1-Antichymotrypsin - genetics</topic><topic>alpha 1-Antitrypsin - genetics</topic><topic>Case-Control Studies</topic><topic>Female</topic><topic>Humans</topic><topic>Italy</topic><topic>Lung Diseases, Obstructive - genetics</topic><topic>Male</topic><topic>Middle Aged</topic><topic>Polymorphism, Genetic</topic><topic>Risk Factors</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Benetazzo, M G</creatorcontrib><creatorcontrib>Gilè, L S</creatorcontrib><creatorcontrib>Bombieri, C</creatorcontrib><creatorcontrib>Malerba, G</creatorcontrib><creatorcontrib>Massobrio, M</creatorcontrib><creatorcontrib>Pignatti, P F</creatorcontrib><creatorcontrib>Luisetti, M</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>MEDLINE - Academic</collection><jtitle>Respiratory medicine</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Benetazzo, M G</au><au>Gilè, L S</au><au>Bombieri, C</au><au>Malerba, G</au><au>Massobrio, M</au><au>Pignatti, P F</au><au>Luisetti, M</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>alpha 1-antitrypsin TAQ I polymorphism and alpha 1-antichymotrypsin mutations in patients with obstructive pulmonary disease</atitle><jtitle>Respiratory medicine</jtitle><addtitle>Respir Med</addtitle><date>1999-09</date><risdate>1999</risdate><volume>93</volume><issue>9</issue><spage>648</spage><epage>654</epage><pages>648-654</pages><issn>0954-6111</issn><abstract>Obstructive pulmonary disease is a multifactorial condition deriving from the interaction of environmental and genetic factors. From biochemical knowledge of the basis of the disease, alpha 1-antitrypsin and alpha 1-antichymotrypsin are considered two likely candidate genes. We therefore designed an association study comprising 232 unrelated Italian individuals divided as follows: 89 individuals with obstructive lung disease (66 with COPD and 23 with disseminated bronchiectasis) and 143 controls (45 patients with non-obstructive lung disease and 98 healthy individuals). We screened for Taq I (G1237A) polymorphism of the alpha 1-antitrypsin gene as well as the rare variants Bonn-1 (Pro229Ala), Bochum-1 (Leu55Pro), Isehara-1 (Met389Val) and Isehara-2 (1258delAA), and the common signal peptide polymorphism Thr-15Ala of the alpha 1-antichymotrypsin gene. The frequencies of Taq I G1237A alleles were 11.7 and 10.8% in obstructed patients and controls, respectively (P = 0.43), while those of signal peptide Thr-15Ala alleles were 51.6 and 50.3% in obstructed patients and controls, respectively (P = 0.42). We conclude that alpha 1-antitrypsin Taq I polymorphism and alpha 1-antichymotrypsin Thr-15Ala mutation are not major genetic risk factors for the development of obstructive lung disease in Italian patients. The alpha 1-antichymotrypsin rare variants were not detected: our results do not exclude the possibility that other alpha 1-antichymotrypsin gene mutations might be present in Italian obstructed patients but, if so, these genetic defects must be rare.</abstract><cop>England</cop><pmid>10542979</pmid><tpages>7</tpages></addata></record> |
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subjects | Aged alpha 1-Antichymotrypsin - genetics alpha 1-Antitrypsin - genetics Case-Control Studies Female Humans Italy Lung Diseases, Obstructive - genetics Male Middle Aged Polymorphism, Genetic Risk Factors |
title | alpha 1-antitrypsin TAQ I polymorphism and alpha 1-antichymotrypsin mutations in patients with obstructive pulmonary disease |
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