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The structure of plastocyanin from the cyanobacterium Phormidium laminosum
The crystal structure of the `blue' copper protein plastocyanin from the cyanobacterium Phormidium laminosum has been solved and refined using 2.8 Å X‐ray data. P. laminosum plastocyanin crystallizes in space group P43212 with unit‐cell dimensions a = 86.57, c = 91.47 Å and with three protein...
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Published in: | Acta crystallographica. Section D, Biological crystallography. Biological crystallography., 1999-02, Vol.55 (2), p.414-421 |
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container_title | Acta crystallographica. Section D, Biological crystallography. |
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creator | Bond, Charles S. Bendall, Derek S. Freeman, Hans C. Guss, J. Mitchell Howe, Christopher J. Wagner, Michael J. Wilce, Matthew C. J. |
description | The crystal structure of the `blue' copper protein plastocyanin from the cyanobacterium Phormidium laminosum has been solved and refined using 2.8 Å X‐ray data. P. laminosum plastocyanin crystallizes in space group P43212 with unit‐cell dimensions a = 86.57, c = 91.47 Å and with three protein molecules per asymmetric unit. The final residual R is 19.9%. The structure was solved using molecular replacement with a search model based on the crystal structure of a close homologue, Anabaena variabilis plastocyanin (66% sequence identity). The molecule of P. laminosum plastocyanin has 105 amino‐acid residues. The single Cu atom is coordinated by the same residues – two histidines, a cysteine and a methionine – as in other plastocyanins. In the crystal structure, the three molecules of the asymmetric unit are related by a non‐crystallographic threefold axis. A Zn atom lies between each pair of neighbouring molecules in this ensemble, being coordinated by a surface histidine residue of one molecule and by two aspartates of the other. |
doi_str_mv | 10.1107/S0907444998012074 |
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Mitchell ; Howe, Christopher J. ; Wagner, Michael J. ; Wilce, Matthew C. J.</creator><creatorcontrib>Bond, Charles S. ; Bendall, Derek S. ; Freeman, Hans C. ; Guss, J. Mitchell ; Howe, Christopher J. ; Wagner, Michael J. ; Wilce, Matthew C. J.</creatorcontrib><description>The crystal structure of the `blue' copper protein plastocyanin from the cyanobacterium Phormidium laminosum has been solved and refined using 2.8 Å X‐ray data. P. laminosum plastocyanin crystallizes in space group P43212 with unit‐cell dimensions a = 86.57, c = 91.47 Å and with three protein molecules per asymmetric unit. The final residual R is 19.9%. The structure was solved using molecular replacement with a search model based on the crystal structure of a close homologue, Anabaena variabilis plastocyanin (66% sequence identity). The molecule of P. laminosum plastocyanin has 105 amino‐acid residues. The single Cu atom is coordinated by the same residues – two histidines, a cysteine and a methionine – as in other plastocyanins. In the crystal structure, the three molecules of the asymmetric unit are related by a non‐crystallographic threefold axis. A Zn atom lies between each pair of neighbouring molecules in this ensemble, being coordinated by a surface histidine residue of one molecule and by two aspartates of the other.</description><identifier>ISSN: 1399-0047</identifier><identifier>ISSN: 0907-4449</identifier><identifier>EISSN: 1399-0047</identifier><identifier>DOI: 10.1107/S0907444998012074</identifier><identifier>PMID: 10089349</identifier><language>eng</language><publisher>5 Abbey Square, Chester, Cheshire CH1 2HU, England: International Union of Crystallography</publisher><subject>Amino Acid Sequence ; Crystallography, X-Ray ; Cyanobacteria - chemistry ; Magnetic Resonance Spectroscopy ; Molecular Sequence Data ; plastocyanin (P. laminosum) ; Plastocyanin - chemistry ; Protein Conformation ; Sequence Homology, Amino Acid ; Zinc - chemistry</subject><ispartof>Acta crystallographica. 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J.</creatorcontrib><title>The structure of plastocyanin from the cyanobacterium Phormidium laminosum</title><title>Acta crystallographica. Section D, Biological crystallography.</title><addtitle>Acta Cryst. D</addtitle><description>The crystal structure of the `blue' copper protein plastocyanin from the cyanobacterium Phormidium laminosum has been solved and refined using 2.8 Å X‐ray data. P. laminosum plastocyanin crystallizes in space group P43212 with unit‐cell dimensions a = 86.57, c = 91.47 Å and with three protein molecules per asymmetric unit. The final residual R is 19.9%. The structure was solved using molecular replacement with a search model based on the crystal structure of a close homologue, Anabaena variabilis plastocyanin (66% sequence identity). The molecule of P. laminosum plastocyanin has 105 amino‐acid residues. The single Cu atom is coordinated by the same residues – two histidines, a cysteine and a methionine – as in other plastocyanins. In the crystal structure, the three molecules of the asymmetric unit are related by a non‐crystallographic threefold axis. A Zn atom lies between each pair of neighbouring molecules in this ensemble, being coordinated by a surface histidine residue of one molecule and by two aspartates of the other.</description><subject>Amino Acid Sequence</subject><subject>Crystallography, X-Ray</subject><subject>Cyanobacteria - chemistry</subject><subject>Magnetic Resonance Spectroscopy</subject><subject>Molecular Sequence Data</subject><subject>plastocyanin (P. laminosum)</subject><subject>Plastocyanin - chemistry</subject><subject>Protein Conformation</subject><subject>Sequence Homology, Amino Acid</subject><subject>Zinc - chemistry</subject><issn>1399-0047</issn><issn>0907-4449</issn><issn>1399-0047</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1999</creationdate><recordtype>article</recordtype><recordid>eNqFkL1OwzAUhS0EoqXwACwoE1vgOnZie6wKLUgtP6KAmCzXcdRAUhc7EfSheAmejFSpUCUGpnt09X1nOAgdYzjDGNj5AwhglFIhOOCoiTuoi4kQIQBlu1u5gw68fwWAKCJsH3UwABeEii4aT-cm8JWrdVU7E9gsWBbKV1av1CJfBJmzZVA1yPfX-mNnSlfG5XUZ3M2tK_N0HQtV5gvr6_IQ7WWq8OZoc3vocXg5HVyF49vR9aA_DjWNGAmzOOUJ1knKYhplOMHAOaYQiZgAmCzVmvMEKE1YrLERMZ7FkaFKZNSkMxCG9NBp27t09r02vpJl7rUpCrUwtvYyEQklJIIGxC2onfXemUwuXV4qt5IY5HpC-WfCxjnZlNez0qRbRrtZA_AW-MgLs_q_UfZfLvoTAEYaNWzV3Ffm81dV7k0mjLBYPt-M5P1w-jSeTLgckR8Nc4u-</recordid><startdate>19990201</startdate><enddate>19990201</enddate><creator>Bond, Charles S.</creator><creator>Bendall, Derek S.</creator><creator>Freeman, Hans C.</creator><creator>Guss, J. Mitchell</creator><creator>Howe, Christopher J.</creator><creator>Wagner, Michael J.</creator><creator>Wilce, Matthew C. J.</creator><general>International Union of Crystallography</general><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>19990201</creationdate><title>The structure of plastocyanin from the cyanobacterium Phormidium laminosum</title><author>Bond, Charles S. ; Bendall, Derek S. ; Freeman, Hans C. ; Guss, J. Mitchell ; Howe, Christopher J. ; Wagner, Michael J. ; Wilce, Matthew C. J.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4273-f5d861c6d7542f161088140295300efdcc886044675c1e951b52e4a9f4edb09e3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1999</creationdate><topic>Amino Acid Sequence</topic><topic>Crystallography, X-Ray</topic><topic>Cyanobacteria - chemistry</topic><topic>Magnetic Resonance Spectroscopy</topic><topic>Molecular Sequence Data</topic><topic>plastocyanin (P. laminosum)</topic><topic>Plastocyanin - chemistry</topic><topic>Protein Conformation</topic><topic>Sequence Homology, Amino Acid</topic><topic>Zinc - chemistry</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Bond, Charles S.</creatorcontrib><creatorcontrib>Bendall, Derek S.</creatorcontrib><creatorcontrib>Freeman, Hans C.</creatorcontrib><creatorcontrib>Guss, J. Mitchell</creatorcontrib><creatorcontrib>Howe, Christopher J.</creatorcontrib><creatorcontrib>Wagner, Michael J.</creatorcontrib><creatorcontrib>Wilce, Matthew C. J.</creatorcontrib><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Acta crystallographica. Section D, Biological crystallography.</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Bond, Charles S.</au><au>Bendall, Derek S.</au><au>Freeman, Hans C.</au><au>Guss, J. Mitchell</au><au>Howe, Christopher J.</au><au>Wagner, Michael J.</au><au>Wilce, Matthew C. J.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The structure of plastocyanin from the cyanobacterium Phormidium laminosum</atitle><jtitle>Acta crystallographica. Section D, Biological crystallography.</jtitle><addtitle>Acta Cryst. D</addtitle><date>1999-02-01</date><risdate>1999</risdate><volume>55</volume><issue>2</issue><spage>414</spage><epage>421</epage><pages>414-421</pages><issn>1399-0047</issn><issn>0907-4449</issn><eissn>1399-0047</eissn><abstract>The crystal structure of the `blue' copper protein plastocyanin from the cyanobacterium Phormidium laminosum has been solved and refined using 2.8 Å X‐ray data. P. laminosum plastocyanin crystallizes in space group P43212 with unit‐cell dimensions a = 86.57, c = 91.47 Å and with three protein molecules per asymmetric unit. The final residual R is 19.9%. The structure was solved using molecular replacement with a search model based on the crystal structure of a close homologue, Anabaena variabilis plastocyanin (66% sequence identity). The molecule of P. laminosum plastocyanin has 105 amino‐acid residues. The single Cu atom is coordinated by the same residues – two histidines, a cysteine and a methionine – as in other plastocyanins. In the crystal structure, the three molecules of the asymmetric unit are related by a non‐crystallographic threefold axis. A Zn atom lies between each pair of neighbouring molecules in this ensemble, being coordinated by a surface histidine residue of one molecule and by two aspartates of the other.</abstract><cop>5 Abbey Square, Chester, Cheshire CH1 2HU, England</cop><pub>International Union of Crystallography</pub><pmid>10089349</pmid><doi>10.1107/S0907444998012074</doi><tpages>8</tpages><oa>free_for_read</oa></addata></record> |
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source | Wiley-Blackwell Read & Publish Collection; Alma/SFX Local Collection |
subjects | Amino Acid Sequence Crystallography, X-Ray Cyanobacteria - chemistry Magnetic Resonance Spectroscopy Molecular Sequence Data plastocyanin (P. laminosum) Plastocyanin - chemistry Protein Conformation Sequence Homology, Amino Acid Zinc - chemistry |
title | The structure of plastocyanin from the cyanobacterium Phormidium laminosum |
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