GPC4, the gene for human K-glypican, flanks GPC3 on Xq26 : Deletion of the GPC3-GPC4 gene cluster in one family with Simpson-Golabi-Behmel syndrome

• Published in: Genomics (San Diego, Calif.) Calif.), 1998-10, Vol.53 (1), p.1-11
• Main Authors: VEUGELERS, M, VERMEESCH, J, WATANABE, K, YAMAGUCHI, Y, MARYNEN, P, DAVID, G
• Format: Article
• Language: English
• Subjects: Amino Acid Sequence; Base Sequence; Biological and medical sciences; Chromosome Mapping; Cloning, Molecular; Diseases of the osteoarticular system; DNA Mutational Analysis; Exons - genetics; Genetic Diseases, Inborn - genetics; Genetic Linkage - genetics; Glypicans; Heparan Sulfate Proteoglycans; Heparitin Sulfate - genetics; Humans; In Situ Hybridization, Fluorescence; Introns - genetics; Malformations and congenital and or hereditary diseases involving bones. Joint deformations; Medical sciences; Molecular Sequence Data; Proteoglycans - chemistry; Proteoglycans - genetics; RNA, Messenger - metabolism; Sequence Alignment; Sequence Analysis, DNA; Sequence Deletion - genetics; X Chromosome - genetics
• ISSN: 0888-7543; 1089-8646
• DOI: 10.1006/geno.1998.5465

The glypicans constitute a growing family of cell surface heparan sulfate proteoglycans that may play a role in the control of cell division and growth regulation. Recently, deletions and translocations involving GPC3 (the gene for glypican-3, localized on Xq26) have been identified in patients with Simpson-Golabi-Behmel syndrome (SGBS). This X-linked syndrome is characterized by pre- and postnatal overgrowth, visceral and skeletal abnormalities, and a high risk for the development of embryonal tumors, mostly Wilms tumor and neuroblastoma. In the present report we show that the gene for human K-glypican/glypican-4 (GPC4) also maps to Xq26, centromeric to GPC3. The glypican-4 protein is encoded by nine exons. Establishment of a BAC/PAC contig physically linking GPC4 and GPC3 indicates that these two genes are arranged in a tandem array, the 5' end of GPC4 flanking the 3' end of GPC3. Unlike the glypican-3 message, the glypican-4 message is nearly ubiquitous. Analysis of DNA samples from eight patients with diagnosis of SGBS identified one individual with a deletion that involves the entire GPC4 gene and the last two exons of GPC3. The tight clustering of GPC3 and GPC4, with deletions that occasionally affect both genes, may be relevant for explaining the variability of the SGBS phenotype.