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Cloning and Characterization of the Murine PKC α Promoter: Identification of a Retinoic Acid Response Element
Protein kinase C (PKC) is a family which consists of multiple isoforms whose distinct physiological roles within the cell are unknown. We have previously demonstrated that levels of PKC α mRNA, protein, and enzyme activity in B16 melanoma cells can be modulated by retinoic acid. We investigated this...
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Published in: | Biochemical and biophysical research communications 1999-09, Vol.263 (1), p.28-34 |
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creator | Desai, Dinakar S. Hirai, Syu-ichi Karnes, William E. Niles, Richard M. Ohno, Shi-geo |
description | Protein kinase C (PKC) is a family which consists of multiple isoforms whose distinct physiological roles within the cell are unknown. We have previously demonstrated that levels of PKC α mRNA, protein, and enzyme activity in B16 melanoma cells can be modulated by retinoic acid. We investigated this regulation by cloning and characterizing the promoter region of the murine PKC α gene. A 13 kb mouse genomic fragment containing the 5′ flanking region, first exon, and first intron was isolated and sequenced. Two transcription initiation sites were identified at 919 and 925 bp upstream from the translation start site. The promoter region contained a TATA-like box at −93 bp upstream of the transcription start site, but no CAAT box. Promoter activity differed between cell lines and correlated with the levels of PKC α expressed in these cell lines. Reporter gene assays showed that the region between −179 and −452 bp likely contains a silencer element(s). The promoter activity of a −179 bp fragment in B16 cells was stimulated twofold by retinoic acid. Within this region (−93 to −65 bp) there is a retinoic acid response element. An oligonucleotide spanning this region specifically bound exogenous RAR-RXR heterodimers and endogenous RAR from B16 nuclear extracts. These results suggest that retinoic acid increases PKC α gene expression in B16 cells, at least in part, through direct transcriptional stimulation of its promoter. |
doi_str_mv | 10.1006/bbrc.1999.1307 |
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We have previously demonstrated that levels of PKC α mRNA, protein, and enzyme activity in B16 melanoma cells can be modulated by retinoic acid. We investigated this regulation by cloning and characterizing the promoter region of the murine PKC α gene. A 13 kb mouse genomic fragment containing the 5′ flanking region, first exon, and first intron was isolated and sequenced. Two transcription initiation sites were identified at 919 and 925 bp upstream from the translation start site. The promoter region contained a TATA-like box at −93 bp upstream of the transcription start site, but no CAAT box. Promoter activity differed between cell lines and correlated with the levels of PKC α expressed in these cell lines. Reporter gene assays showed that the region between −179 and −452 bp likely contains a silencer element(s). The promoter activity of a −179 bp fragment in B16 cells was stimulated twofold by retinoic acid. Within this region (−93 to −65 bp) there is a retinoic acid response element. An oligonucleotide spanning this region specifically bound exogenous RAR-RXR heterodimers and endogenous RAR from B16 nuclear extracts. These results suggest that retinoic acid increases PKC α gene expression in B16 cells, at least in part, through direct transcriptional stimulation of its promoter.</description><identifier>ISSN: 0006-291X</identifier><identifier>EISSN: 1090-2104</identifier><identifier>DOI: 10.1006/bbrc.1999.1307</identifier><identifier>PMID: 10486248</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Animals ; Base Sequence ; Binding Sites - genetics ; Cell Line ; Cloning, Molecular ; DNA - genetics ; DNA - metabolism ; DNA Primers - genetics ; Genes, Regulator - drug effects ; Isoenzymes - genetics ; Melanoma, Experimental - drug therapy ; Melanoma, Experimental - enzymology ; Melanoma, Experimental - genetics ; Mice ; Molecular Sequence Data ; Promoter Regions, Genetic - drug effects ; Protein Kinase C - genetics ; Protein Kinase C-alpha ; Rats ; Receptors, Retinoic Acid - metabolism ; Retinoid X Receptors ; Transcription Factors - metabolism ; Tretinoin - pharmacology ; Tumor Cells, Cultured</subject><ispartof>Biochemical and biophysical research communications, 1999-09, Vol.263 (1), p.28-34</ispartof><rights>1999 Academic Press</rights><rights>Copyright 1999 Academic Press.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c371t-45ade1dc9e56199d4d7b23acc25e35b6e898fa9fd02c22d94a402c6f73022cf83</citedby><cites>FETCH-LOGICAL-c371t-45ade1dc9e56199d4d7b23acc25e35b6e898fa9fd02c22d94a402c6f73022cf83</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/10486248$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Desai, Dinakar S.</creatorcontrib><creatorcontrib>Hirai, Syu-ichi</creatorcontrib><creatorcontrib>Karnes, William E.</creatorcontrib><creatorcontrib>Niles, Richard M.</creatorcontrib><creatorcontrib>Ohno, Shi-geo</creatorcontrib><title>Cloning and Characterization of the Murine PKC α Promoter: Identification of a Retinoic Acid Response Element</title><title>Biochemical and biophysical research communications</title><addtitle>Biochem Biophys Res Commun</addtitle><description>Protein kinase C (PKC) is a family which consists of multiple isoforms whose distinct physiological roles within the cell are unknown. We have previously demonstrated that levels of PKC α mRNA, protein, and enzyme activity in B16 melanoma cells can be modulated by retinoic acid. We investigated this regulation by cloning and characterizing the promoter region of the murine PKC α gene. A 13 kb mouse genomic fragment containing the 5′ flanking region, first exon, and first intron was isolated and sequenced. Two transcription initiation sites were identified at 919 and 925 bp upstream from the translation start site. The promoter region contained a TATA-like box at −93 bp upstream of the transcription start site, but no CAAT box. Promoter activity differed between cell lines and correlated with the levels of PKC α expressed in these cell lines. Reporter gene assays showed that the region between −179 and −452 bp likely contains a silencer element(s). The promoter activity of a −179 bp fragment in B16 cells was stimulated twofold by retinoic acid. Within this region (−93 to −65 bp) there is a retinoic acid response element. An oligonucleotide spanning this region specifically bound exogenous RAR-RXR heterodimers and endogenous RAR from B16 nuclear extracts. These results suggest that retinoic acid increases PKC α gene expression in B16 cells, at least in part, through direct transcriptional stimulation of its promoter.</description><subject>Animals</subject><subject>Base Sequence</subject><subject>Binding Sites - genetics</subject><subject>Cell Line</subject><subject>Cloning, Molecular</subject><subject>DNA - genetics</subject><subject>DNA - metabolism</subject><subject>DNA Primers - genetics</subject><subject>Genes, Regulator - drug effects</subject><subject>Isoenzymes - genetics</subject><subject>Melanoma, Experimental - drug therapy</subject><subject>Melanoma, Experimental - enzymology</subject><subject>Melanoma, Experimental - genetics</subject><subject>Mice</subject><subject>Molecular Sequence Data</subject><subject>Promoter Regions, Genetic - drug effects</subject><subject>Protein Kinase C - genetics</subject><subject>Protein Kinase C-alpha</subject><subject>Rats</subject><subject>Receptors, Retinoic Acid - metabolism</subject><subject>Retinoid X Receptors</subject><subject>Transcription Factors - metabolism</subject><subject>Tretinoin - pharmacology</subject><subject>Tumor Cells, Cultured</subject><issn>0006-291X</issn><issn>1090-2104</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1999</creationdate><recordtype>article</recordtype><recordid>eNqF0U9LwzAYBvAgis4_V4-Sk7fOJO3axtsoU4eKIgreQpq8dZE2mUkn6Lfyi_iZzKiIF_GUhPzyQp4HoUNKxpSQ_KSuvRpTzvmYpqTYQCNKOEkYJdkmGpEoEsbp4w7aDeGZEEqznG-jnXhd5iwrR8hWrbPGPmFpNa4W0kvVgzfvsjfOYtfgfgH4euWNBXx7WeHPD3zrXeciOsVzDbY3jVE_WuI76I11RuGpMjqewtLZAHjWQhfxPtpqZBvg4HvdQw9ns_vqIrm6OZ9X06tEpQXtk2wiNVCtOEzy-Dmd6aJmqVSKTSCd1DmUvGwkbzRhijHNM5nFXd4UKWFMNWW6h46HuUvvXlYQetGZoKBtpQW3CqIgJMtjGv9CWqSMDnA8QOVdCB4asfSmk_5NUCLWVYh1FWJdhVhXER8cfU9e1R3oX3zIPoJyABCDeDXgRVAGrAJtPKheaGf-mv0FjdqY6A</recordid><startdate>19990916</startdate><enddate>19990916</enddate><creator>Desai, Dinakar S.</creator><creator>Hirai, Syu-ichi</creator><creator>Karnes, William E.</creator><creator>Niles, Richard M.</creator><creator>Ohno, Shi-geo</creator><general>Elsevier Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7TM</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>19990916</creationdate><title>Cloning and Characterization of the Murine PKC α Promoter: Identification of a Retinoic Acid Response Element</title><author>Desai, Dinakar S. ; Hirai, Syu-ichi ; Karnes, William E. ; Niles, Richard M. ; Ohno, Shi-geo</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c371t-45ade1dc9e56199d4d7b23acc25e35b6e898fa9fd02c22d94a402c6f73022cf83</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1999</creationdate><topic>Animals</topic><topic>Base Sequence</topic><topic>Binding Sites - genetics</topic><topic>Cell Line</topic><topic>Cloning, Molecular</topic><topic>DNA - genetics</topic><topic>DNA - metabolism</topic><topic>DNA Primers - genetics</topic><topic>Genes, Regulator - drug effects</topic><topic>Isoenzymes - genetics</topic><topic>Melanoma, Experimental - drug therapy</topic><topic>Melanoma, Experimental - enzymology</topic><topic>Melanoma, Experimental - genetics</topic><topic>Mice</topic><topic>Molecular Sequence Data</topic><topic>Promoter Regions, Genetic - drug effects</topic><topic>Protein Kinase C - genetics</topic><topic>Protein Kinase C-alpha</topic><topic>Rats</topic><topic>Receptors, Retinoic Acid - metabolism</topic><topic>Retinoid X Receptors</topic><topic>Transcription Factors - metabolism</topic><topic>Tretinoin - pharmacology</topic><topic>Tumor Cells, Cultured</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Desai, Dinakar S.</creatorcontrib><creatorcontrib>Hirai, Syu-ichi</creatorcontrib><creatorcontrib>Karnes, William E.</creatorcontrib><creatorcontrib>Niles, Richard M.</creatorcontrib><creatorcontrib>Ohno, Shi-geo</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Nucleic Acids Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Biochemical and biophysical research communications</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Desai, Dinakar S.</au><au>Hirai, Syu-ichi</au><au>Karnes, William E.</au><au>Niles, Richard M.</au><au>Ohno, Shi-geo</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Cloning and Characterization of the Murine PKC α Promoter: Identification of a Retinoic Acid Response Element</atitle><jtitle>Biochemical and biophysical research communications</jtitle><addtitle>Biochem Biophys Res Commun</addtitle><date>1999-09-16</date><risdate>1999</risdate><volume>263</volume><issue>1</issue><spage>28</spage><epage>34</epage><pages>28-34</pages><issn>0006-291X</issn><eissn>1090-2104</eissn><abstract>Protein kinase C (PKC) is a family which consists of multiple isoforms whose distinct physiological roles within the cell are unknown. We have previously demonstrated that levels of PKC α mRNA, protein, and enzyme activity in B16 melanoma cells can be modulated by retinoic acid. We investigated this regulation by cloning and characterizing the promoter region of the murine PKC α gene. A 13 kb mouse genomic fragment containing the 5′ flanking region, first exon, and first intron was isolated and sequenced. Two transcription initiation sites were identified at 919 and 925 bp upstream from the translation start site. The promoter region contained a TATA-like box at −93 bp upstream of the transcription start site, but no CAAT box. Promoter activity differed between cell lines and correlated with the levels of PKC α expressed in these cell lines. Reporter gene assays showed that the region between −179 and −452 bp likely contains a silencer element(s). The promoter activity of a −179 bp fragment in B16 cells was stimulated twofold by retinoic acid. Within this region (−93 to −65 bp) there is a retinoic acid response element. An oligonucleotide spanning this region specifically bound exogenous RAR-RXR heterodimers and endogenous RAR from B16 nuclear extracts. These results suggest that retinoic acid increases PKC α gene expression in B16 cells, at least in part, through direct transcriptional stimulation of its promoter.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>10486248</pmid><doi>10.1006/bbrc.1999.1307</doi><tpages>7</tpages></addata></record> |
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subjects | Animals Base Sequence Binding Sites - genetics Cell Line Cloning, Molecular DNA - genetics DNA - metabolism DNA Primers - genetics Genes, Regulator - drug effects Isoenzymes - genetics Melanoma, Experimental - drug therapy Melanoma, Experimental - enzymology Melanoma, Experimental - genetics Mice Molecular Sequence Data Promoter Regions, Genetic - drug effects Protein Kinase C - genetics Protein Kinase C-alpha Rats Receptors, Retinoic Acid - metabolism Retinoid X Receptors Transcription Factors - metabolism Tretinoin - pharmacology Tumor Cells, Cultured |
title | Cloning and Characterization of the Murine PKC α Promoter: Identification of a Retinoic Acid Response Element |
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