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Octa- O-propanoyl-β-maltose: crystal structure, acyl stacking, related structures, and conformational analysis
The crystal structure of β-maltose octapropanoate ( 1) was solved to improve understanding of di-, oligo-, and polysaccharide conformations. The O6 and O6′ atoms are in gg and gt orientations, respectively. Extrapolation of the coordinates of the non-reducing residue and observed linkage bond and to...
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Published in: | Carbohydrate research 2007-07, Vol.342 (9), p.1210-1222 |
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creator | Johnson, Glenn P. Stevens, Edwin D. French, Alfred D. |
description | The crystal structure of β-maltose octapropanoate (
1) was solved to improve understanding of di-, oligo-, and polysaccharide conformations. The O6 and O6′ atoms are in
gg and
gt orientations, respectively. Extrapolation of the coordinates of the non-reducing residue and observed linkage bond and torsion angles of
1
(
τ
C1
′
–
O4
–
C4
=
116.0
°
,
ϕ
O5
′
–
C1
′
–
O4
–
C4
=
77.1
°
,
ψ
C5
–
C4
–
O4
–
C1
′
=
-
157.5
°
)
yields a left-handed helix similar to amylose triacetate I. The
ϕ and
ψ values of
1 are also similar to those of other crystalline, acylated maltose compounds as well as some hydroxyl-bearing molecules. Acylated maltose moieties are often stabilized by stacking of the carbonyl groups and α-carbons on O3 and O2′ as well as by the
exo-anomeric effect. The conformation of
1 is within the 1-kcal/mol contour on a hybrid energy map built with a dielectric constant of 7.5, but corresponds to higher energies on maps made with lower dielectric constants. In one region of
ϕ,
ψ space, both hydroxyl-bearing and derivatized maltose moieties are found but no inter-residue, intramolecular hydrogen-bonding occurs. In another region, only hydroxyl-bearing molecules crystallize and O2′⋯O3 hydrogen bonds are always found. In agreement with the energy surfaces, amylose helices extrapolated from available linkage geometries were almost all left-handed. |
doi_str_mv | 10.1016/j.carres.2007.02.029 |
format | article |
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1) was solved to improve understanding of di-, oligo-, and polysaccharide conformations. The O6 and O6′ atoms are in
gg and
gt orientations, respectively. Extrapolation of the coordinates of the non-reducing residue and observed linkage bond and torsion angles of
1
(
τ
C1
′
–
O4
–
C4
=
116.0
°
,
ϕ
O5
′
–
C1
′
–
O4
–
C4
=
77.1
°
,
ψ
C5
–
C4
–
O4
–
C1
′
=
-
157.5
°
)
yields a left-handed helix similar to amylose triacetate I. The
ϕ and
ψ values of
1 are also similar to those of other crystalline, acylated maltose compounds as well as some hydroxyl-bearing molecules. Acylated maltose moieties are often stabilized by stacking of the carbonyl groups and α-carbons on O3 and O2′ as well as by the
exo-anomeric effect. The conformation of
1 is within the 1-kcal/mol contour on a hybrid energy map built with a dielectric constant of 7.5, but corresponds to higher energies on maps made with lower dielectric constants. In one region of
ϕ,
ψ space, both hydroxyl-bearing and derivatized maltose moieties are found but no inter-residue, intramolecular hydrogen-bonding occurs. In another region, only hydroxyl-bearing molecules crystallize and O2′⋯O3 hydrogen bonds are always found. In agreement with the energy surfaces, amylose helices extrapolated from available linkage geometries were almost all left-handed.</description><identifier>ISSN: 0008-6215</identifier><identifier>EISSN: 1873-426X</identifier><identifier>DOI: 10.1016/j.carres.2007.02.029</identifier><identifier>PMID: 17383618</identifier><language>eng</language><publisher>Netherlands: Elsevier Ltd</publisher><subject>Carbohydrate ; Carbohydrate Conformation ; Conformation ; Crystallization ; Crystallography, X-Ray - methods ; Hybrid ; Hydrogen Bonding ; Maltose - analogs & derivatives ; Maltose - chemistry ; Models, Molecular ; Molecular ; Molecular Structure ; Propionate ; Quantum mechanics ; Starch</subject><ispartof>Carbohydrate research, 2007-07, Vol.342 (9), p.1210-1222</ispartof><rights>2007 Elsevier Ltd</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c360t-26852270b9edacb013dd245b059d6b12594156dca77c05f840a551e11d280e043</citedby><cites>FETCH-LOGICAL-c360t-26852270b9edacb013dd245b059d6b12594156dca77c05f840a551e11d280e043</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27922,27923</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/17383618$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Johnson, Glenn P.</creatorcontrib><creatorcontrib>Stevens, Edwin D.</creatorcontrib><creatorcontrib>French, Alfred D.</creatorcontrib><title>Octa- O-propanoyl-β-maltose: crystal structure, acyl stacking, related structures, and conformational analysis</title><title>Carbohydrate research</title><addtitle>Carbohydr Res</addtitle><description>The crystal structure of β-maltose octapropanoate (
1) was solved to improve understanding of di-, oligo-, and polysaccharide conformations. The O6 and O6′ atoms are in
gg and
gt orientations, respectively. Extrapolation of the coordinates of the non-reducing residue and observed linkage bond and torsion angles of
1
(
τ
C1
′
–
O4
–
C4
=
116.0
°
,
ϕ
O5
′
–
C1
′
–
O4
–
C4
=
77.1
°
,
ψ
C5
–
C4
–
O4
–
C1
′
=
-
157.5
°
)
yields a left-handed helix similar to amylose triacetate I. The
ϕ and
ψ values of
1 are also similar to those of other crystalline, acylated maltose compounds as well as some hydroxyl-bearing molecules. Acylated maltose moieties are often stabilized by stacking of the carbonyl groups and α-carbons on O3 and O2′ as well as by the
exo-anomeric effect. The conformation of
1 is within the 1-kcal/mol contour on a hybrid energy map built with a dielectric constant of 7.5, but corresponds to higher energies on maps made with lower dielectric constants. In one region of
ϕ,
ψ space, both hydroxyl-bearing and derivatized maltose moieties are found but no inter-residue, intramolecular hydrogen-bonding occurs. In another region, only hydroxyl-bearing molecules crystallize and O2′⋯O3 hydrogen bonds are always found. In agreement with the energy surfaces, amylose helices extrapolated from available linkage geometries were almost all left-handed.</description><subject>Carbohydrate</subject><subject>Carbohydrate Conformation</subject><subject>Conformation</subject><subject>Crystallization</subject><subject>Crystallography, X-Ray - methods</subject><subject>Hybrid</subject><subject>Hydrogen Bonding</subject><subject>Maltose - analogs & derivatives</subject><subject>Maltose - chemistry</subject><subject>Models, Molecular</subject><subject>Molecular</subject><subject>Molecular Structure</subject><subject>Propionate</subject><subject>Quantum mechanics</subject><subject>Starch</subject><issn>0008-6215</issn><issn>1873-426X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2007</creationdate><recordtype>article</recordtype><recordid>eNp9kMFq3DAQhkVI6G6SvkEoPuUUbUayJds9FEpI0kJgLy30JmRpNmhjW1tJLvi1-iB9pmjZhb0Vhhl--OYf5ifkhsGKAZP325XRIWBccYB6BTxXe0aWrKlLWnH565wsAaChkjOxIJcxbrMEWcsPZMHqsikla5bEr03StFjTXfA7Pfq5p__-0kH3yUf8XJgwx6T7IqYwmTQFvCu0mfdamzc3vt4VAXud0J6ImJHRFsaPGx8GnZwfs4HObY4uXpOLje4jfjzOK_Lz6fHHwzf6sn7-_vD1hZpSQqJcNoLzGroWrTYdsNJaXokORGtlx7hoKyakNbquDYhNU4EWgiFjljeAUJVX5Pbgm__6PWFManDRYN_rEf0UVQ2VlIzJDFYH0AQfY8CN2gU36DArBmoftNqqQ9BqH7QCnqvNa5-O_lM3oD0tHZPNwJcDgPnLPw6DisbhaNC6gCYp693_L7wD_auSwg</recordid><startdate>20070702</startdate><enddate>20070702</enddate><creator>Johnson, Glenn P.</creator><creator>Stevens, Edwin D.</creator><creator>French, Alfred D.</creator><general>Elsevier Ltd</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20070702</creationdate><title>Octa- O-propanoyl-β-maltose: crystal structure, acyl stacking, related structures, and conformational analysis</title><author>Johnson, Glenn P. ; Stevens, Edwin D. ; French, Alfred D.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c360t-26852270b9edacb013dd245b059d6b12594156dca77c05f840a551e11d280e043</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2007</creationdate><topic>Carbohydrate</topic><topic>Carbohydrate Conformation</topic><topic>Conformation</topic><topic>Crystallization</topic><topic>Crystallography, X-Ray - methods</topic><topic>Hybrid</topic><topic>Hydrogen Bonding</topic><topic>Maltose - analogs & derivatives</topic><topic>Maltose - chemistry</topic><topic>Models, Molecular</topic><topic>Molecular</topic><topic>Molecular Structure</topic><topic>Propionate</topic><topic>Quantum mechanics</topic><topic>Starch</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Johnson, Glenn P.</creatorcontrib><creatorcontrib>Stevens, Edwin D.</creatorcontrib><creatorcontrib>French, Alfred D.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Carbohydrate research</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Johnson, Glenn P.</au><au>Stevens, Edwin D.</au><au>French, Alfred D.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Octa- O-propanoyl-β-maltose: crystal structure, acyl stacking, related structures, and conformational analysis</atitle><jtitle>Carbohydrate research</jtitle><addtitle>Carbohydr Res</addtitle><date>2007-07-02</date><risdate>2007</risdate><volume>342</volume><issue>9</issue><spage>1210</spage><epage>1222</epage><pages>1210-1222</pages><issn>0008-6215</issn><eissn>1873-426X</eissn><abstract>The crystal structure of β-maltose octapropanoate (
1) was solved to improve understanding of di-, oligo-, and polysaccharide conformations. The O6 and O6′ atoms are in
gg and
gt orientations, respectively. Extrapolation of the coordinates of the non-reducing residue and observed linkage bond and torsion angles of
1
(
τ
C1
′
–
O4
–
C4
=
116.0
°
,
ϕ
O5
′
–
C1
′
–
O4
–
C4
=
77.1
°
,
ψ
C5
–
C4
–
O4
–
C1
′
=
-
157.5
°
)
yields a left-handed helix similar to amylose triacetate I. The
ϕ and
ψ values of
1 are also similar to those of other crystalline, acylated maltose compounds as well as some hydroxyl-bearing molecules. Acylated maltose moieties are often stabilized by stacking of the carbonyl groups and α-carbons on O3 and O2′ as well as by the
exo-anomeric effect. The conformation of
1 is within the 1-kcal/mol contour on a hybrid energy map built with a dielectric constant of 7.5, but corresponds to higher energies on maps made with lower dielectric constants. In one region of
ϕ,
ψ space, both hydroxyl-bearing and derivatized maltose moieties are found but no inter-residue, intramolecular hydrogen-bonding occurs. In another region, only hydroxyl-bearing molecules crystallize and O2′⋯O3 hydrogen bonds are always found. In agreement with the energy surfaces, amylose helices extrapolated from available linkage geometries were almost all left-handed.</abstract><cop>Netherlands</cop><pub>Elsevier Ltd</pub><pmid>17383618</pmid><doi>10.1016/j.carres.2007.02.029</doi><tpages>13</tpages></addata></record> |
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source | Elsevier |
subjects | Carbohydrate Carbohydrate Conformation Conformation Crystallization Crystallography, X-Ray - methods Hybrid Hydrogen Bonding Maltose - analogs & derivatives Maltose - chemistry Models, Molecular Molecular Molecular Structure Propionate Quantum mechanics Starch |
title | Octa- O-propanoyl-β-maltose: crystal structure, acyl stacking, related structures, and conformational analysis |
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