Mutations of the phenylalanine hydroxylase (PAH) gene in Brazilian patients with phenylketonuria

• Published in: Human mutation 2001-02, Vol.17 (2), p.122-130
• Main Authors: Acosta, A.X., Silva Jr, W.A., Carvalho, T.M., Gomes, M., Zago, M.A.
• Format: Article
• Language: English
• Subjects: Brazil; Brazilian population; DNA - chemistry; DNA - genetics; DNA Mutational Analysis; Family Health; Female; Genotype; Haplotypes; Humans; Male; Mutation; mutation analysis; PAH; Phenotype; phenylalanine hydroxylase; Phenylalanine Hydroxylase - genetics; phenylketonuria; Phenylketonurias - enzymology; Phenylketonurias - genetics; Phenylketonurias - pathology; PKU; Polymorphism, Genetic; Polymorphism, Single-Stranded Conformational
• ISSN: 1059-7794; 1098-1004
• DOI: 10.1002/1098-1004(200102)17:2<122::AID-HUMU4>3.0.CO;2-C

In the present study, 115 Brazilian families with phenylketonuria (PKU), mainly from the Southeast of the country, were studied using three laboratory methods (DGGE, SSCP, and sequencing). All 13 exons of the PAH gene were analyzed, including the splicing sites and the promoter region. We identified 50 distinct mutations and characterized 91% of the mutant alleles. The five most prevalent mutations of the 50 mutations identified (50% of the PKU alleles) were IVS10nt‐11G→A (17.4%), followed by R261Q (12.2%), V388M (9.1%), R252W (6.5%), and R270K (4.8%). The other mutations were rare. The mutation spectrum included 10 novel mutations (IVS5nt‐54A→G, IVS6nt17G→T, E205A, F240S, K274E, I318T, L321L, C357G, IVS11nt17G→A, and S411X). To characterize the origin and distribution of the PAH alleles we determined the association between the detected mutations and the PCR/RFLP haplotypes and VNTR alleles located on the PAH gene. For those patients whose mutant alleles were detected, we calculated the correlation with pretreatment phenylalanine levels, thus establishing a genotype/phenotype correlation. The present results confirm the marked heterogeneity observed at the PAH locus and contribute to the understanding of the distribution and frequency of PKU mutations in the Brazilian population. Hum Mutat 17:122–130, 2001. © 2001 Wiley‐Liss, Inc.