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Comparison of Entamoeba histolytica DNA isolated from a cynomolgus monkey with human isolates
Three protein-coding loci in DNA of an Entamoeba histolytica strain (EHMfas1) isolated from cynomolgus monkey (Macaca fascicularis) were sequenced; these loci corresponded to the genes for chitinase, the serine-rich E. histolytica protein (SREHP), and the 16 S-like small subunit ribosomal RNA (16S-l...
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Published in: | Parasitology research (1987) 2007-08, Vol.101 (3), p.539-546 |
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container_title | Parasitology research (1987) |
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creator | Takano, Jun-ichiro Narita, Toyoko Tachibana, Hiroshi Terao, Keiji Fujimoto, Koji |
description | Three protein-coding loci in DNA of an Entamoeba histolytica strain (EHMfas1) isolated from cynomolgus monkey (Macaca fascicularis) were sequenced; these loci corresponded to the genes for chitinase, the serine-rich E. histolytica protein (SREHP), and the 16 S-like small subunit ribosomal RNA (16S-like SSUrRNA). The nucleotide and deduced amino-acid sequences of chitinase and SREHP were compared with sequences from human isolates. EHMfas1 had several specific mutations in units in the polymorphic regions of the chitinase and SREHP loci, with some repetition of these mutated units. The sequence of the 16S-like SSUrRNA gene (16S-like SSUrDNA) was compared with other Entamoeba species. In phylogenetic analysis, EHMfas1 was not categorized in the E. histolytica cluster but between E. histolytica and E. dispar. To our knowledge, this is the first molecular characterization of E. histolytica isolated from cynomolgus monkey, and our results indicate that EHMfas1 may be a subspecies of E. histolytica that infects cynomolgus monkey. |
doi_str_mv | 10.1007/s00436-007-0510-2 |
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The nucleotide and deduced amino-acid sequences of chitinase and SREHP were compared with sequences from human isolates. EHMfas1 had several specific mutations in units in the polymorphic regions of the chitinase and SREHP loci, with some repetition of these mutated units. The sequence of the 16S-like SSUrRNA gene (16S-like SSUrDNA) was compared with other Entamoeba species. In phylogenetic analysis, EHMfas1 was not categorized in the E. histolytica cluster but between E. histolytica and E. dispar. To our knowledge, this is the first molecular characterization of E. histolytica isolated from cynomolgus monkey, and our results indicate that EHMfas1 may be a subspecies of E. histolytica that infects cynomolgus monkey.</description><identifier>ISSN: 0932-0113</identifier><identifier>EISSN: 1432-1955</identifier><identifier>DOI: 10.1007/s00436-007-0510-2</identifier><identifier>PMID: 17356893</identifier><identifier>CODEN: PARREZ</identifier><language>eng</language><publisher>Berlin: Berlin/Heidelberg : Springer-Verlag</publisher><subject>Amino Acid Sequence ; Animals ; Base Sequence ; Biological and medical sciences ; Chitinases - genetics ; DNA, Protozoan - analysis ; DNA, Protozoan - genetics ; DNA, Protozoan - isolation & purification ; Entamoeba histolytica - genetics ; Entamoeba histolytica - isolation & purification ; Entamoebiasis - parasitology ; Fundamental and applied biological sciences. Psychology ; General aspects ; General aspects and techniques. Study of several systematic groups. Models ; Humans ; Invertebrates ; Macaca fascicularis - parasitology ; Mammalia ; Membrane Proteins - genetics ; Molecular Sequence Data ; Monkey Diseases - parasitology ; Phylogeny ; Protozoan Proteins - genetics ; RNA, Ribosomal, 16S - genetics ; Sequence Analysis, DNA ; Species Specificity ; Vertebrates: general zoology, morphology, phylogeny, systematics, cytogenetics, geographical distribution</subject><ispartof>Parasitology research (1987), 2007-08, Vol.101 (3), p.539-546</ispartof><rights>2007 INIST-CNRS</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c353t-92329389f1219fcdb2ab174c9495c6188e96f9af2bc95e023db42344adb035f73</citedby><cites>FETCH-LOGICAL-c353t-92329389f1219fcdb2ab174c9495c6188e96f9af2bc95e023db42344adb035f73</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27901,27902</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=18949465$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/17356893$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Takano, Jun-ichiro</creatorcontrib><creatorcontrib>Narita, Toyoko</creatorcontrib><creatorcontrib>Tachibana, Hiroshi</creatorcontrib><creatorcontrib>Terao, Keiji</creatorcontrib><creatorcontrib>Fujimoto, Koji</creatorcontrib><title>Comparison of Entamoeba histolytica DNA isolated from a cynomolgus monkey with human isolates</title><title>Parasitology research (1987)</title><addtitle>Parasitol Res</addtitle><description>Three protein-coding loci in DNA of an Entamoeba histolytica strain (EHMfas1) isolated from cynomolgus monkey (Macaca fascicularis) were sequenced; these loci corresponded to the genes for chitinase, the serine-rich E. histolytica protein (SREHP), and the 16 S-like small subunit ribosomal RNA (16S-like SSUrRNA). The nucleotide and deduced amino-acid sequences of chitinase and SREHP were compared with sequences from human isolates. EHMfas1 had several specific mutations in units in the polymorphic regions of the chitinase and SREHP loci, with some repetition of these mutated units. The sequence of the 16S-like SSUrRNA gene (16S-like SSUrDNA) was compared with other Entamoeba species. In phylogenetic analysis, EHMfas1 was not categorized in the E. histolytica cluster but between E. histolytica and E. dispar. To our knowledge, this is the first molecular characterization of E. histolytica isolated from cynomolgus monkey, and our results indicate that EHMfas1 may be a subspecies of E. histolytica that infects cynomolgus monkey.</description><subject>Amino Acid Sequence</subject><subject>Animals</subject><subject>Base Sequence</subject><subject>Biological and medical sciences</subject><subject>Chitinases - genetics</subject><subject>DNA, Protozoan - analysis</subject><subject>DNA, Protozoan - genetics</subject><subject>DNA, Protozoan - isolation & purification</subject><subject>Entamoeba histolytica - genetics</subject><subject>Entamoeba histolytica - isolation & purification</subject><subject>Entamoebiasis - parasitology</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>General aspects</subject><subject>General aspects and techniques. Study of several systematic groups. Models</subject><subject>Humans</subject><subject>Invertebrates</subject><subject>Macaca fascicularis - parasitology</subject><subject>Mammalia</subject><subject>Membrane Proteins - genetics</subject><subject>Molecular Sequence Data</subject><subject>Monkey Diseases - parasitology</subject><subject>Phylogeny</subject><subject>Protozoan Proteins - genetics</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>Sequence Analysis, DNA</subject><subject>Species Specificity</subject><subject>Vertebrates: general zoology, morphology, phylogeny, systematics, cytogenetics, geographical distribution</subject><issn>0932-0113</issn><issn>1432-1955</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2007</creationdate><recordtype>article</recordtype><recordid>eNpFkE1P3DAQhq2qqCzQH9AL9QVuoeOvJD6iZWkrITi0e0TWxLHZ0DjexonQ_vt6tVtxmvfwvDOah5AvDG4YQPUtAUhRFjkWoBgU_ANZMCl4wbRSH8kCdM7AmDglZym9ArCqlPITOWWVUGWtxYI8L2PY4tilONDo6WqYMETXIN10aYr9buos0rvHW5qJHifXUj_GQJHa3RBD7F_mREMc_rgdfeumDd3MAYf_cLogJx775D4f5zlZ369-L38UD0_ffy5vHworlJgKzQXXotaecaa9bRuODauk1VIrW7K6drr0Gj1vrFYOuGgbyYWU2DYglK_EObk-7N2O8e_s0mRCl6zrexxcnJOpoCorrXQG2QG0Y0xpdN5sxy7guDMMzN6pOTg1-7h3anjuXB6Xz01w7XvjKDEDV0cAk8XejzjYLr1zdf5DlipzXw-cx2jwJUs3618cmMjHNJQCxD9pm4hJ</recordid><startdate>20070801</startdate><enddate>20070801</enddate><creator>Takano, Jun-ichiro</creator><creator>Narita, Toyoko</creator><creator>Tachibana, Hiroshi</creator><creator>Terao, Keiji</creator><creator>Fujimoto, Koji</creator><general>Berlin/Heidelberg : Springer-Verlag</general><general>Springer</general><scope>FBQ</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20070801</creationdate><title>Comparison of Entamoeba histolytica DNA isolated from a cynomolgus monkey with human isolates</title><author>Takano, Jun-ichiro ; Narita, Toyoko ; Tachibana, Hiroshi ; Terao, Keiji ; Fujimoto, Koji</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c353t-92329389f1219fcdb2ab174c9495c6188e96f9af2bc95e023db42344adb035f73</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2007</creationdate><topic>Amino Acid Sequence</topic><topic>Animals</topic><topic>Base Sequence</topic><topic>Biological and medical sciences</topic><topic>Chitinases - genetics</topic><topic>DNA, Protozoan - analysis</topic><topic>DNA, Protozoan - genetics</topic><topic>DNA, Protozoan - isolation & purification</topic><topic>Entamoeba histolytica - genetics</topic><topic>Entamoeba histolytica - isolation & purification</topic><topic>Entamoebiasis - parasitology</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>General aspects</topic><topic>General aspects and techniques. Study of several systematic groups. Models</topic><topic>Humans</topic><topic>Invertebrates</topic><topic>Macaca fascicularis - parasitology</topic><topic>Mammalia</topic><topic>Membrane Proteins - genetics</topic><topic>Molecular Sequence Data</topic><topic>Monkey Diseases - parasitology</topic><topic>Phylogeny</topic><topic>Protozoan Proteins - genetics</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>Sequence Analysis, DNA</topic><topic>Species Specificity</topic><topic>Vertebrates: general zoology, morphology, phylogeny, systematics, cytogenetics, geographical distribution</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Takano, Jun-ichiro</creatorcontrib><creatorcontrib>Narita, Toyoko</creatorcontrib><creatorcontrib>Tachibana, Hiroshi</creatorcontrib><creatorcontrib>Terao, Keiji</creatorcontrib><creatorcontrib>Fujimoto, Koji</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Parasitology research (1987)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Takano, Jun-ichiro</au><au>Narita, Toyoko</au><au>Tachibana, Hiroshi</au><au>Terao, Keiji</au><au>Fujimoto, Koji</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Comparison of Entamoeba histolytica DNA isolated from a cynomolgus monkey with human isolates</atitle><jtitle>Parasitology research (1987)</jtitle><addtitle>Parasitol Res</addtitle><date>2007-08-01</date><risdate>2007</risdate><volume>101</volume><issue>3</issue><spage>539</spage><epage>546</epage><pages>539-546</pages><issn>0932-0113</issn><eissn>1432-1955</eissn><coden>PARREZ</coden><abstract>Three protein-coding loci in DNA of an Entamoeba histolytica strain (EHMfas1) isolated from cynomolgus monkey (Macaca fascicularis) were sequenced; these loci corresponded to the genes for chitinase, the serine-rich E. histolytica protein (SREHP), and the 16 S-like small subunit ribosomal RNA (16S-like SSUrRNA). The nucleotide and deduced amino-acid sequences of chitinase and SREHP were compared with sequences from human isolates. EHMfas1 had several specific mutations in units in the polymorphic regions of the chitinase and SREHP loci, with some repetition of these mutated units. The sequence of the 16S-like SSUrRNA gene (16S-like SSUrDNA) was compared with other Entamoeba species. In phylogenetic analysis, EHMfas1 was not categorized in the E. histolytica cluster but between E. histolytica and E. dispar. To our knowledge, this is the first molecular characterization of E. histolytica isolated from cynomolgus monkey, and our results indicate that EHMfas1 may be a subspecies of E. histolytica that infects cynomolgus monkey.</abstract><cop>Berlin</cop><pub>Berlin/Heidelberg : Springer-Verlag</pub><pmid>17356893</pmid><doi>10.1007/s00436-007-0510-2</doi><tpages>8</tpages></addata></record> |
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subjects | Amino Acid Sequence Animals Base Sequence Biological and medical sciences Chitinases - genetics DNA, Protozoan - analysis DNA, Protozoan - genetics DNA, Protozoan - isolation & purification Entamoeba histolytica - genetics Entamoeba histolytica - isolation & purification Entamoebiasis - parasitology Fundamental and applied biological sciences. Psychology General aspects General aspects and techniques. Study of several systematic groups. Models Humans Invertebrates Macaca fascicularis - parasitology Mammalia Membrane Proteins - genetics Molecular Sequence Data Monkey Diseases - parasitology Phylogeny Protozoan Proteins - genetics RNA, Ribosomal, 16S - genetics Sequence Analysis, DNA Species Specificity Vertebrates: general zoology, morphology, phylogeny, systematics, cytogenetics, geographical distribution |
title | Comparison of Entamoeba histolytica DNA isolated from a cynomolgus monkey with human isolates |
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