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DNA structures common for chironomid telomeres terminating with complex repeats
Tandem repeats, 340 bp long, have been shown to terminate the chromosomes in Chironomus pallidivittatus and similar DNA may be used for this purpose by related insects. In view of the importance of Chironomus in telomere studies, representing in principle a third system after short repeats and Droso...
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Published in: | Insect molecular biology 2000-06, Vol.9 (3), p.341-347 |
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description | Tandem repeats, 340 bp long, have been shown to terminate the chromosomes in Chironomus pallidivittatus and similar DNA may be used for this purpose by related insects. In view of the importance of Chironomus in telomere studies, representing in principle a third system after short repeats and Drosophila telomeric retrotransposons, we have investigated the related Chironomus dilutus, to learn what DNA structures are conserved at the chromosome ends. Interspersed subrepeats in the telomeric repeats, which contain a long palindrome, and a zone of about 100 bp of relatively constant subtelomeric DNA towards the junction to the telomeric DNA, are characteristic for C. dilutus as for previously investigated species. C. dilutus has similar subtelomeric DNA at all chromosome ends, but typical telomeric repeats in only seven of the pairs since the eighth telocentric pair contains centromere‐specific repeats. |
doi_str_mv | 10.1046/j.1365-2583.2000.00193.x |
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C. dilutus has similar subtelomeric DNA at all chromosome ends, but typical telomeric repeats in only seven of the pairs since the eighth telocentric pair contains centromere‐specific repeats.</description><identifier>ISSN: 0962-1075</identifier><identifier>EISSN: 1365-2583</identifier><identifier>DOI: 10.1046/j.1365-2583.2000.00193.x</identifier><identifier>PMID: 10886419</identifier><language>eng</language><publisher>Oxford, UK: Blackwell Science Ltd</publisher><subject>Animals ; Base Sequence ; centromere ; Chironomidae ; Chironomidae - genetics ; Chironomus ; Chironomus dilutus ; Chironomus pallidivittatus ; DNA - chemistry ; Freshwater ; Genes, Insect ; In Situ Hybridization - methods ; Molecular Sequence Data ; Mutation ; Nucleic Acid Conformation ; palindrome ; sequence evolution ; Sequence Homology, Nucleic Acid ; Species Specificity ; subtelomere ; Tandem Repeat Sequences ; Telomere</subject><ispartof>Insect molecular biology, 2000-06, Vol.9 (3), p.341-347</ispartof><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4333-2b155bcc8e908236ea7fb54e0d6666ea185978a1db100121e5d7a480dc931a7e3</citedby><cites>FETCH-LOGICAL-c4333-2b155bcc8e908236ea7fb54e0d6666ea185978a1db100121e5d7a480dc931a7e3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,778,782,27911,27912</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/10886419$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Rosen, M</creatorcontrib><creatorcontrib>Edstroem, J</creatorcontrib><title>DNA structures common for chironomid telomeres terminating with complex repeats</title><title>Insect molecular biology</title><addtitle>Insect Mol Biol</addtitle><description>Tandem repeats, 340 bp long, have been shown to terminate the chromosomes in Chironomus pallidivittatus and similar DNA may be used for this purpose by related insects. 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C. dilutus has similar subtelomeric DNA at all chromosome ends, but typical telomeric repeats in only seven of the pairs since the eighth telocentric pair contains centromere‐specific repeats.</description><subject>Animals</subject><subject>Base Sequence</subject><subject>centromere</subject><subject>Chironomidae</subject><subject>Chironomidae - genetics</subject><subject>Chironomus</subject><subject>Chironomus dilutus</subject><subject>Chironomus pallidivittatus</subject><subject>DNA - chemistry</subject><subject>Freshwater</subject><subject>Genes, Insect</subject><subject>In Situ Hybridization - methods</subject><subject>Molecular Sequence Data</subject><subject>Mutation</subject><subject>Nucleic Acid Conformation</subject><subject>palindrome</subject><subject>sequence evolution</subject><subject>Sequence Homology, Nucleic Acid</subject><subject>Species Specificity</subject><subject>subtelomere</subject><subject>Tandem Repeat Sequences</subject><subject>Telomere</subject><issn>0962-1075</issn><issn>1365-2583</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2000</creationdate><recordtype>article</recordtype><recordid>eNqNkMtu1DAUQC0EotPCL6Cs2CX4-pE4EptSmKFSaTeturQc5w71kMSD7ajTvydpqopd640t3XNs-RCSAS2AivLLrgBeypxJxQtGKS0ohZoXhzdk9Tx4S1a0LlkOtJJH5DjG3QSquqzfkyOgSpUC6hW5-n55msUURpvGgDGzvu_9kG19yOydC37wvWuzhJ3vcZ4nDL0bTHLD7-zepbtZ2Hd4yALu0aT4gbzbmi7ix6f9hNysf1yf_cwvrjbnZ6cXuRWc85w1IGVjrcKaKsZLNNW2kQJpW04LDShZV8pA28D0NQYo28oIRVtbczAV8hPyebl3H_zfEWPSvYsWu84M6MeoK2ACGBcvgqCYkFyoCVQLaIOPMeBW74PrTXjQQPVcXe_0HFfPcfVcXT9W14dJ_fT0xtj02P4nLpkn4OsC3LsOH159sT7_9W06THq-6C4mPDzrJvzRZcUrqW8vN5qt5ZqLza1m_B-tGZ9U</recordid><startdate>200006</startdate><enddate>200006</enddate><creator>Rosen, M</creator><creator>Edstroem, J</creator><general>Blackwell Science Ltd</general><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7SS</scope><scope>7TM</scope><scope>F1W</scope><scope>H95</scope><scope>L.G</scope><scope>7X8</scope></search><sort><creationdate>200006</creationdate><title>DNA structures common for chironomid telomeres terminating with complex repeats</title><author>Rosen, M ; Edstroem, J</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4333-2b155bcc8e908236ea7fb54e0d6666ea185978a1db100121e5d7a480dc931a7e3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2000</creationdate><topic>Animals</topic><topic>Base Sequence</topic><topic>centromere</topic><topic>Chironomidae</topic><topic>Chironomidae - genetics</topic><topic>Chironomus</topic><topic>Chironomus dilutus</topic><topic>Chironomus pallidivittatus</topic><topic>DNA - chemistry</topic><topic>Freshwater</topic><topic>Genes, Insect</topic><topic>In Situ Hybridization - methods</topic><topic>Molecular Sequence Data</topic><topic>Mutation</topic><topic>Nucleic Acid Conformation</topic><topic>palindrome</topic><topic>sequence evolution</topic><topic>Sequence Homology, Nucleic Acid</topic><topic>Species Specificity</topic><topic>subtelomere</topic><topic>Tandem Repeat Sequences</topic><topic>Telomere</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Rosen, M</creatorcontrib><creatorcontrib>Edstroem, J</creatorcontrib><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Nucleic Acids Abstracts</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>MEDLINE - Academic</collection><jtitle>Insect molecular biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Rosen, M</au><au>Edstroem, J</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>DNA structures common for chironomid telomeres terminating with complex repeats</atitle><jtitle>Insect molecular biology</jtitle><addtitle>Insect Mol Biol</addtitle><date>2000-06</date><risdate>2000</risdate><volume>9</volume><issue>3</issue><spage>341</spage><epage>347</epage><pages>341-347</pages><issn>0962-1075</issn><eissn>1365-2583</eissn><abstract>Tandem repeats, 340 bp long, have been shown to terminate the chromosomes in Chironomus pallidivittatus and similar DNA may be used for this purpose by related insects. In view of the importance of Chironomus in telomere studies, representing in principle a third system after short repeats and Drosophila telomeric retrotransposons, we have investigated the related Chironomus dilutus, to learn what DNA structures are conserved at the chromosome ends. Interspersed subrepeats in the telomeric repeats, which contain a long palindrome, and a zone of about 100 bp of relatively constant subtelomeric DNA towards the junction to the telomeric DNA, are characteristic for C. dilutus as for previously investigated species. C. dilutus has similar subtelomeric DNA at all chromosome ends, but typical telomeric repeats in only seven of the pairs since the eighth telocentric pair contains centromere‐specific repeats.</abstract><cop>Oxford, UK</cop><pub>Blackwell Science Ltd</pub><pmid>10886419</pmid><doi>10.1046/j.1365-2583.2000.00193.x</doi><tpages>7</tpages></addata></record> |
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subjects | Animals Base Sequence centromere Chironomidae Chironomidae - genetics Chironomus Chironomus dilutus Chironomus pallidivittatus DNA - chemistry Freshwater Genes, Insect In Situ Hybridization - methods Molecular Sequence Data Mutation Nucleic Acid Conformation palindrome sequence evolution Sequence Homology, Nucleic Acid Species Specificity subtelomere Tandem Repeat Sequences Telomere |
title | DNA structures common for chironomid telomeres terminating with complex repeats |
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