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How Does Product Isotope Effect Prove the Operation of a Two-State “Rebound” Mechanism in C−H Hydroxylation by Cytochrome P450?
C−H hydroxylation is a fundamental process. In Nature it is catalyzed by the enzyme cytochrome P450, in a still-debated mechanism that poses a major intellectual challenge for both experiment and theory; currently, the opinions keep swaying between the original single-state rebound mechanism, a two-...
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Published in: | Journal of the American Chemical Society 2003-10, Vol.125 (43), p.13024-13025 |
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description | C−H hydroxylation is a fundamental process. In Nature it is catalyzed by the enzyme cytochrome P450, in a still-debated mechanism that poses a major intellectual challenge for both experiment and theory; currently, the opinions keep swaying between the original single-state rebound mechanism, a two-oxidant mechanism (where ferric peroxide participates as a second oxidant, in addition to the primary active species, the high-valent iron−oxo species), and two-state reactivity (TSR) mechanism (where two spin states are involved). Recent product isotope effect (PIE) measurements for the trans-2-phenyl-methyl cyclopropane probe (1), led Newcomb and co-workers (Newcomb, M.; Aebisher, D.; Shen, R.; Esala, R.; Chandrasena, P.; Hollenberg, P.; Coon, M. J. J. Am. Chem. Soc. 2003 , 125, 6064−6065) to rule out TSR in favor of the two-oxidant scenario, since the direction of the PIE was at odds with the one predicted from calculations on methane hydroxylation. The present report describes a density functional theoretical study of C−H hydroxylation of the Newcomb probe, 1, leading to rearranged (3) and unrearranged (2) products. Our study shows that the reaction occurs via TSR in which the high-spin pathway gives dominant rearranged products, whereas the low-spin pathway favors unrearranged products. The calculated PIE(2/3) values based on TSR are found to be in excellent agreement with the experimental data of Newcomb and co-workers. This match between experiment and theory makes a strong case that the reaction occurs via TSR mechanism. |
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In Nature it is catalyzed by the enzyme cytochrome P450, in a still-debated mechanism that poses a major intellectual challenge for both experiment and theory; currently, the opinions keep swaying between the original single-state rebound mechanism, a two-oxidant mechanism (where ferric peroxide participates as a second oxidant, in addition to the primary active species, the high-valent iron−oxo species), and two-state reactivity (TSR) mechanism (where two spin states are involved). Recent product isotope effect (PIE) measurements for the trans-2-phenyl-methyl cyclopropane probe (1), led Newcomb and co-workers (Newcomb, M.; Aebisher, D.; Shen, R.; Esala, R.; Chandrasena, P.; Hollenberg, P.; Coon, M. J. J. Am. Chem. Soc. 2003 , 125, 6064−6065) to rule out TSR in favor of the two-oxidant scenario, since the direction of the PIE was at odds with the one predicted from calculations on methane hydroxylation. The present report describes a density functional theoretical study of C−H hydroxylation of the Newcomb probe, 1, leading to rearranged (3) and unrearranged (2) products. Our study shows that the reaction occurs via TSR in which the high-spin pathway gives dominant rearranged products, whereas the low-spin pathway favors unrearranged products. The calculated PIE(2/3) values based on TSR are found to be in excellent agreement with the experimental data of Newcomb and co-workers. This match between experiment and theory makes a strong case that the reaction occurs via TSR mechanism.</description><identifier>ISSN: 0002-7863</identifier><identifier>EISSN: 1520-5126</identifier><identifier>DOI: 10.1021/ja036906x</identifier><identifier>PMID: 14570465</identifier><identifier>CODEN: JACSAT</identifier><language>eng</language><publisher>Washington, DC: American Chemical Society</publisher><subject>Biological and medical sciences ; Chemistry ; Cyclopropanes - chemistry ; Cyclopropanes - metabolism ; Cytochrome P-450 Enzyme System - chemistry ; Cytochrome P-450 Enzyme System - metabolism ; Deuterium - chemistry ; Deuterium Exchange Measurement ; Exact sciences and technology ; Ferric Compounds - chemistry ; Fundamental and applied biological sciences. Psychology ; Hydrogen Peroxide - chemistry ; Hydroxylation ; Kinetics ; Kinetics and mechanisms ; Mechanisms. Catalysis. Electron transfer. 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Am. Chem. Soc</addtitle><description>C−H hydroxylation is a fundamental process. In Nature it is catalyzed by the enzyme cytochrome P450, in a still-debated mechanism that poses a major intellectual challenge for both experiment and theory; currently, the opinions keep swaying between the original single-state rebound mechanism, a two-oxidant mechanism (where ferric peroxide participates as a second oxidant, in addition to the primary active species, the high-valent iron−oxo species), and two-state reactivity (TSR) mechanism (where two spin states are involved). Recent product isotope effect (PIE) measurements for the trans-2-phenyl-methyl cyclopropane probe (1), led Newcomb and co-workers (Newcomb, M.; Aebisher, D.; Shen, R.; Esala, R.; Chandrasena, P.; Hollenberg, P.; Coon, M. J. J. Am. Chem. Soc. 2003 , 125, 6064−6065) to rule out TSR in favor of the two-oxidant scenario, since the direction of the PIE was at odds with the one predicted from calculations on methane hydroxylation. The present report describes a density functional theoretical study of C−H hydroxylation of the Newcomb probe, 1, leading to rearranged (3) and unrearranged (2) products. Our study shows that the reaction occurs via TSR in which the high-spin pathway gives dominant rearranged products, whereas the low-spin pathway favors unrearranged products. The calculated PIE(2/3) values based on TSR are found to be in excellent agreement with the experimental data of Newcomb and co-workers. This match between experiment and theory makes a strong case that the reaction occurs via TSR mechanism.</description><subject>Biological and medical sciences</subject><subject>Chemistry</subject><subject>Cyclopropanes - chemistry</subject><subject>Cyclopropanes - metabolism</subject><subject>Cytochrome P-450 Enzyme System - chemistry</subject><subject>Cytochrome P-450 Enzyme System - metabolism</subject><subject>Deuterium - chemistry</subject><subject>Deuterium Exchange Measurement</subject><subject>Exact sciences and technology</subject><subject>Ferric Compounds - chemistry</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Hydrogen Peroxide - chemistry</subject><subject>Hydroxylation</subject><subject>Kinetics</subject><subject>Kinetics and mechanisms</subject><subject>Mechanisms. Catalysis. Electron transfer. Models</subject><subject>Molecular biophysics</subject><subject>Organic chemistry</subject><subject>Physical chemistry in biology</subject><subject>Reactivity and mechanisms</subject><subject>Thermodynamics</subject><issn>0002-7863</issn><issn>1520-5126</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2003</creationdate><recordtype>article</recordtype><recordid>eNpt0E9v0zAYBnALgVgZHPgCyBeQOAT8J07SE5rKIJM6rWNF4ma9SV6rKUlcbIc1t12QOHOGL9dPQlCr9cLJeu2fH716CHnO2RvOBH-7BiaTKUu2D8iEK8EixUXykEwYYyJKs0SekCfer8cxFhl_TE54rFIWJ2pCfuT2lr636OnC2aovA73wNtgN0nNjcBzH6-9Iwwrp1QYdhNp21BoKdHlro5sAAenu7vcnLGzfVbu7P_QSyxV0tW9p3dHZ7uevnOZD5ex2aPa_i4HOhmDLlbMt0kWs2Lun5JGBxuOzw3lKPn84X87yaH718WJ2No9AptMQGZYwZqASCEVayMRkCpUa9-RZNsWUSZnKQoBETFAVwASrYgaxMKXAaZXF8pS82udunP3Wow-6rX2JTQMd2t7rlEvGVcZH-HoPS2e9d2j0xtUtuEFzpv91ru87H-2LQ2hftFgd5aHkEbw8APAlNMZBV9b-6JTgWRxno4v2rvYBt_fv4L7qJJWp0svFjZ6r6y_59SzXl8dcKL1e2951Y3f_WfAvDgynSQ</recordid><startdate>20031029</startdate><enddate>20031029</enddate><creator>Kumar, Devesh</creator><creator>de Visser, Samuël P</creator><creator>Shaik, Sason</creator><general>American Chemical Society</general><scope>BSCLL</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20031029</creationdate><title>How Does Product Isotope Effect Prove the Operation of a Two-State “Rebound” Mechanism in C−H Hydroxylation by Cytochrome P450?</title><author>Kumar, Devesh ; de Visser, Samuël P ; Shaik, Sason</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a379t-f0600fad2eab7b36f85e55ffe1889e703373b2a3ee6e5ba020d40a42fc2e9d843</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2003</creationdate><topic>Biological and medical sciences</topic><topic>Chemistry</topic><topic>Cyclopropanes - chemistry</topic><topic>Cyclopropanes - metabolism</topic><topic>Cytochrome P-450 Enzyme System - chemistry</topic><topic>Cytochrome P-450 Enzyme System - metabolism</topic><topic>Deuterium - chemistry</topic><topic>Deuterium Exchange Measurement</topic><topic>Exact sciences and technology</topic><topic>Ferric Compounds - chemistry</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Hydrogen Peroxide - chemistry</topic><topic>Hydroxylation</topic><topic>Kinetics</topic><topic>Kinetics and mechanisms</topic><topic>Mechanisms. Catalysis. Electron transfer. Models</topic><topic>Molecular biophysics</topic><topic>Organic chemistry</topic><topic>Physical chemistry in biology</topic><topic>Reactivity and mechanisms</topic><topic>Thermodynamics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Kumar, Devesh</creatorcontrib><creatorcontrib>de Visser, Samuël P</creatorcontrib><creatorcontrib>Shaik, Sason</creatorcontrib><collection>Istex</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of the American Chemical Society</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kumar, Devesh</au><au>de Visser, Samuël P</au><au>Shaik, Sason</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>How Does Product Isotope Effect Prove the Operation of a Two-State “Rebound” Mechanism in C−H Hydroxylation by Cytochrome P450?</atitle><jtitle>Journal of the American Chemical Society</jtitle><addtitle>J. Am. Chem. Soc</addtitle><date>2003-10-29</date><risdate>2003</risdate><volume>125</volume><issue>43</issue><spage>13024</spage><epage>13025</epage><pages>13024-13025</pages><issn>0002-7863</issn><eissn>1520-5126</eissn><coden>JACSAT</coden><abstract>C−H hydroxylation is a fundamental process. In Nature it is catalyzed by the enzyme cytochrome P450, in a still-debated mechanism that poses a major intellectual challenge for both experiment and theory; currently, the opinions keep swaying between the original single-state rebound mechanism, a two-oxidant mechanism (where ferric peroxide participates as a second oxidant, in addition to the primary active species, the high-valent iron−oxo species), and two-state reactivity (TSR) mechanism (where two spin states are involved). Recent product isotope effect (PIE) measurements for the trans-2-phenyl-methyl cyclopropane probe (1), led Newcomb and co-workers (Newcomb, M.; Aebisher, D.; Shen, R.; Esala, R.; Chandrasena, P.; Hollenberg, P.; Coon, M. J. J. Am. Chem. Soc. 2003 , 125, 6064−6065) to rule out TSR in favor of the two-oxidant scenario, since the direction of the PIE was at odds with the one predicted from calculations on methane hydroxylation. The present report describes a density functional theoretical study of C−H hydroxylation of the Newcomb probe, 1, leading to rearranged (3) and unrearranged (2) products. Our study shows that the reaction occurs via TSR in which the high-spin pathway gives dominant rearranged products, whereas the low-spin pathway favors unrearranged products. The calculated PIE(2/3) values based on TSR are found to be in excellent agreement with the experimental data of Newcomb and co-workers. This match between experiment and theory makes a strong case that the reaction occurs via TSR mechanism.</abstract><cop>Washington, DC</cop><pub>American Chemical Society</pub><pmid>14570465</pmid><doi>10.1021/ja036906x</doi><tpages>2</tpages></addata></record> |
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subjects | Biological and medical sciences Chemistry Cyclopropanes - chemistry Cyclopropanes - metabolism Cytochrome P-450 Enzyme System - chemistry Cytochrome P-450 Enzyme System - metabolism Deuterium - chemistry Deuterium Exchange Measurement Exact sciences and technology Ferric Compounds - chemistry Fundamental and applied biological sciences. Psychology Hydrogen Peroxide - chemistry Hydroxylation Kinetics Kinetics and mechanisms Mechanisms. Catalysis. Electron transfer. Models Molecular biophysics Organic chemistry Physical chemistry in biology Reactivity and mechanisms Thermodynamics |
title | How Does Product Isotope Effect Prove the Operation of a Two-State “Rebound” Mechanism in C−H Hydroxylation by Cytochrome P450? |
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