MetaGeneAlyse: analysis of integrated transcriptional and metabolite data

New techniques in sample preparation allow high throughput analysis of samples on the transcriptional as well as on the metabolic level. We present a service accessible via the web that allows the analysis of integrated data sets that combine gene-expression data and metabolic data. After uploading,...

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Bibliographic Details
Published in:Bioinformatics 2003-11, Vol.19 (17), p.2332-2333
Main Authors: Daub, Carsten O., Kloska, Sebastian, Selbig, Joachim
Format: Article
Language:English
Subjects:
Algorithms
Biological and medical sciences
Fundamental and applied biological sciences. Psychology
Gene Expression Profiling - methods
Gene Expression Regulation - physiology
General aspects
Information Storage and Retrieval - methods
Internet
Mathematics in biology. Statistical analysis. Models. Metrology. Data processing in biology (general aspects)
Metabolism - physiology
Signal Transduction - physiology
Software
Systems Integration
Transcription, Genetic - physiology
User-Computer Interface
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Summary:New techniques in sample preparation allow high throughput analysis of samples on the transcriptional as well as on the metabolic level. We present a service accessible via the web that allows the analysis of integrated data sets that combine gene-expression data and metabolic data. After uploading, data sets can be normalized, clustered by various methods and results can be graphically visualized. All calculations are carried out on a server, so even time- and memory-consuming analyses can be done independently of the performance of the client. Availability: The service is accessible via web-interface at http://metagenealyse.mpimp-golm.mpg.de/
ISSN:1367-4803
1460-2059
1367-4811
DOI:10.1093/bioinformatics/btg321