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Partial conservation of LFY function between rice and Arabidopsis

The LFY/FLO genes encode plant-specific transcription factors and play major roles in the reproductive transition as well as floral development. In this study, we reconstructed the phylogenetic tree of the 49 LFY/FLO homologs from various plant species. The tree clearly shows that the LFY/FLO genes...

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Published in:Plant and cell physiology 2003-12, Vol.44 (12), p.1311-1319
Main Authors: Chujo, A, Zhang, Z, Kishino, H, Shimamoto, K, Kyozuka, J
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description The LFY/FLO genes encode plant-specific transcription factors and play major roles in the reproductive transition as well as floral development. In this study, we reconstructed the phylogenetic tree of the 49 LFY/FLO homologs from various plant species. The tree clearly shows that the LFY/FLO genes from the eudicots and monocots formed the two monophyletic clusters with very high bootstrap probabilities, respectively. Furthermore, grass LFY/FLO genes have experienced significant acceleration of amino acid replacement rate compared with the eudicot homolog. To test whether grass LFY/FLO genes have a conserved function with those of eudicots, we introduced RFL, a rice LFY homolog, into the Arabidopsis lfy mutant. The RFL gene driven by LFY promoter partially rescued the lfy mutation, suggesting that the functions of LFY and RFL partly overlap. Interestingly, the RFL but not LFY, strongly activated the expression of AP1 and AG, the downstream targets of LFY, even in the vegetative tissues. The LFY::RFL transgenic Arabidopsis plants exhibited abnormal patterns of development such as leaf curling, bushy appearance and the transformation of ovules into carpels. All of the results indicate that both the partial conservation and divergence of LFY function between rice and Arabidopsis.
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development</subject><subject>Oryza RFL protein</subject><subject>Oryza sativa</subject><subject>ovules</subject><subject>Phenotype</subject><subject>Phylogeny</subject><subject>Plant Leaves - genetics</subject><subject>Plant Leaves - growth &amp; development</subject><subject>plant morphology</subject><subject>plant proteins</subject><subject>Plant Proteins - genetics</subject><subject>Plant Proteins - physiology</subject><subject>Plants, Genetically Modified</subject><subject>rice</subject><subject>sequence alignment</subject><subject>Sequence Homology, Amino Acid</subject><subject>transcription factors</subject><subject>Transcription Factors - genetics</subject><subject>Transcription Factors - physiology</subject><subject>transgenic plants</subject><subject>vegetative growth</subject><issn>0032-0781</issn><issn>1471-9053</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2003</creationdate><recordtype>article</recordtype><recordid>eNpd0EFLHDEUB_BQWupqe-kHaIcePAhjX5JJMjkuUrWwoKCi9RKSTCKxu5MxmdH67Y2dpYUewkt4P14ef4Q-YTjEIOm3wQ7l3GHG3qAFbgSuJTD6Fi0AKKlBtHgH7eZ8D1DuFN6jnYIAS8IXaHmu0xj0urKxzy496jHEvoq-Wh3_rPzU2z9v48Yn5_oqBesq3XfVMmkTujjkkD-gd16vs_u4rXvo6vj75dFpvTo7-XG0XNW2kXKsuWAd14wwzxyRVHJOBOe8tdiAI5YLDh3zpJFWekO8kYYaR4ywlhHSNobuof157pDiw-TyqDYhW7de697FKSuBG0mwkAV-_Q_exyn1ZTdFAHNMMGkLOpiRTTHn5LwaUtjo9KwwqNdUVUlVzakW_Hk7cTIb1_2j2xgLqGcQ8uh-_-3r9EtxQQVTpze36qJpL1dwfatE8V9m73VU-i6FrK4uynIUys8tZUBfAJ7vikQ</recordid><startdate>20031201</startdate><enddate>20031201</enddate><creator>Chujo, A</creator><creator>Zhang, Z</creator><creator>Kishino, H</creator><creator>Shimamoto, K</creator><creator>Kyozuka, J</creator><general>Oxford University Press</general><general>Oxford Publishing Limited (England)</general><scope>FBQ</scope><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7QO</scope><scope>7QP</scope><scope>7T5</scope><scope>7T7</scope><scope>7TM</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>K9.</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>20031201</creationdate><title>Partial conservation of LFY function between rice and Arabidopsis</title><author>Chujo, A ; Zhang, Z ; Kishino, H ; Shimamoto, K ; Kyozuka, J</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c499t-675d6a525f5e293966276668c1b0e2c6760d5f249c9fb2fb9b3be2b7cc52284b3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2003</creationdate><topic>Amino Acid Sequence</topic><topic>amino acid sequences</topic><topic>Anthirrhinum FLO protein</topic><topic>Antirrhinum majus</topic><topic>Arabidopsis - genetics</topic><topic>Arabidopsis - growth &amp; development</topic><topic>Arabidopsis APETALA 1 protein</topic><topic>Arabidopsis LFY protein</topic><topic>Arabidopsis Proteins - genetics</topic><topic>Arabidopsis Proteins - physiology</topic><topic>Arabidopsis thaliana</topic><topic>Arabiodopsis AGAMOUS protein</topic><topic>Conserved Sequence - genetics</topic><topic>Conserved Sequence - physiology</topic><topic>conserved sequences</topic><topic>flowering</topic><topic>Flowers - genetics</topic><topic>Flowers - growth &amp; development</topic><topic>gene expression</topic><topic>Gene Expression Regulation, Developmental</topic><topic>Gene Expression Regulation, Plant</topic><topic>genetic complementation</topic><topic>Genetic Complementation Test</topic><topic>grain crops</topic><topic>Keywords: Divergence — Flower development — Grass species — LFY/FLO — Phylogeny — RFL</topic><topic>leaves</topic><topic>Molecular Sequence Data</topic><topic>Mutation</topic><topic>Oryza - genetics</topic><topic>Oryza - growth &amp; development</topic><topic>Oryza RFL protein</topic><topic>Oryza sativa</topic><topic>ovules</topic><topic>Phenotype</topic><topic>Phylogeny</topic><topic>Plant Leaves - genetics</topic><topic>Plant Leaves - growth &amp; development</topic><topic>plant morphology</topic><topic>plant proteins</topic><topic>Plant Proteins - genetics</topic><topic>Plant Proteins - physiology</topic><topic>Plants, Genetically Modified</topic><topic>rice</topic><topic>sequence alignment</topic><topic>Sequence Homology, Amino Acid</topic><topic>transcription factors</topic><topic>Transcription Factors - genetics</topic><topic>Transcription Factors - physiology</topic><topic>transgenic plants</topic><topic>vegetative growth</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Chujo, A</creatorcontrib><creatorcontrib>Zhang, Z</creatorcontrib><creatorcontrib>Kishino, H</creatorcontrib><creatorcontrib>Shimamoto, K</creatorcontrib><creatorcontrib>Kyozuka, J</creatorcontrib><collection>AGRIS</collection><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Biotechnology Research Abstracts</collection><collection>Calcium &amp; 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In this study, we reconstructed the phylogenetic tree of the 49 LFY/FLO homologs from various plant species. The tree clearly shows that the LFY/FLO genes from the eudicots and monocots formed the two monophyletic clusters with very high bootstrap probabilities, respectively. Furthermore, grass LFY/FLO genes have experienced significant acceleration of amino acid replacement rate compared with the eudicot homolog. To test whether grass LFY/FLO genes have a conserved function with those of eudicots, we introduced RFL, a rice LFY homolog, into the Arabidopsis lfy mutant. The RFL gene driven by LFY promoter partially rescued the lfy mutation, suggesting that the functions of LFY and RFL partly overlap. Interestingly, the RFL but not LFY, strongly activated the expression of AP1 and AG, the downstream targets of LFY, even in the vegetative tissues. The LFY::RFL transgenic Arabidopsis plants exhibited abnormal patterns of development such as leaf curling, bushy appearance and the transformation of ovules into carpels. All of the results indicate that both the partial conservation and divergence of LFY function between rice and Arabidopsis.</abstract><cop>Japan</cop><pub>Oxford University Press</pub><pmid>14701926</pmid><doi>10.1093/pcp/pcg155</doi><tpages>9</tpages><oa>free_for_read</oa></addata></record>
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ispartof Plant and cell physiology, 2003-12, Vol.44 (12), p.1311-1319
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source Oxford Journals Online
subjects Amino Acid Sequence
amino acid sequences
Anthirrhinum FLO protein
Antirrhinum majus
Arabidopsis - genetics
Arabidopsis - growth & development
Arabidopsis APETALA 1 protein
Arabidopsis LFY protein
Arabidopsis Proteins - genetics
Arabidopsis Proteins - physiology
Arabidopsis thaliana
Arabiodopsis AGAMOUS protein
Conserved Sequence - genetics
Conserved Sequence - physiology
conserved sequences
flowering
Flowers - genetics
Flowers - growth & development
gene expression
Gene Expression Regulation, Developmental
Gene Expression Regulation, Plant
genetic complementation
Genetic Complementation Test
grain crops
Keywords: Divergence — Flower development — Grass species — LFY/FLO — Phylogeny — RFL
leaves
Molecular Sequence Data
Mutation
Oryza - genetics
Oryza - growth & development
Oryza RFL protein
Oryza sativa
ovules
Phenotype
Phylogeny
Plant Leaves - genetics
Plant Leaves - growth & development
plant morphology
plant proteins
Plant Proteins - genetics
Plant Proteins - physiology
Plants, Genetically Modified
rice
sequence alignment
Sequence Homology, Amino Acid
transcription factors
Transcription Factors - genetics
Transcription Factors - physiology
transgenic plants
vegetative growth
title Partial conservation of LFY function between rice and Arabidopsis
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