Loading…

A novel HLA-A allele: A0257

:  A novel human leucocyte antigen‐A*02 (HLA‐A*02) allele was detected by reference strand‐mediated conformation analysis (RSCA) of a DNA sample from a Tarahumara individual. Direct sequencing of HLA‐A locus polymerase chain reaction products identified a mutation in one of the alleles. Cloning and...

Full description

Saved in:
Bibliographic Details
Published in:Tissue antigens 2004-01, Vol.63 (1), p.85-87
Main Authors: García-Ortiz, J.E., Cox, S.T., Sandoval-Ramirez, L., Little, A.M., Marsh, S.G.E., Madrigal, J.A., Argüello, J.R.
Format: Article
Language:English
Subjects:
Citations: Items that this one cites
Items that cite this one
Online Access:Get full text
Tags: Add Tag
No Tags, Be the first to tag this record!
cited_by cdi_FETCH-LOGICAL-c4334-52787259ae103111154d7789784569d44be819bb4bfe682d3fdbfa537f6d05e43
cites cdi_FETCH-LOGICAL-c4334-52787259ae103111154d7789784569d44be819bb4bfe682d3fdbfa537f6d05e43
container_end_page 87
container_issue 1
container_start_page 85
container_title Tissue antigens
container_volume 63
creator García-Ortiz, J.E.
Cox, S.T.
Sandoval-Ramirez, L.
Little, A.M.
Marsh, S.G.E.
Madrigal, J.A.
Argüello, J.R.
description :  A novel human leucocyte antigen‐A*02 (HLA‐A*02) allele was detected by reference strand‐mediated conformation analysis (RSCA) of a DNA sample from a Tarahumara individual. Direct sequencing of HLA‐A locus polymerase chain reaction products identified a mutation in one of the alleles. Cloning and sequencing confirmed the presence of a new allele, A*0257 which differed from A*0206 by two nucleotides at positions 355 and 362, inducing changes in residues 95 and 97, respectively, within the peptide‐binding site. Those changes suggest that allele A*0257 may have resulted from an intralocus recombination event.
doi_str_mv 10.1111/j.1399-0039.2004.00154.x
format article
fullrecord <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_71592674</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>71592674</sourcerecordid><originalsourceid>FETCH-LOGICAL-c4334-52787259ae103111154d7789784569d44be819bb4bfe682d3fdbfa537f6d05e43</originalsourceid><addsrcrecordid>eNqNkF1PwjAUhhujEUR_gYnZlXeb_Vxb481CFDQEo8Ho3cnGumRYGK6g8O_tHMFL7U172uc9PXkQCgiOiF9Xs4gwrUOMmY4oxjzCmAgebQ5Qd_9wiLrYX4dUEdFBJ87NfMWl1seoQ3gsiKC6i86TYFF9GhsMR0mYBKm1xprrIMFUyFN0VKTWmbPd3kMvd7eT_jAcPQ7u-8konHLGeCioVJIKnRqCWTOe4LmUSkvFRaxzzjOjiM4ynhUmVjRnRZ4VqWCyiHMsDGc9dNn2XdbVx9q4FcxLNzXWpgtTrR1IIjSN5d8g0ZRiFjegasFpXTlXmwKWdTlP6y0QDM2IMINGFDSioDEIPwZh46MXuz_W2dzkv8GdMg_ctMBXac32341hkoz9wcfDNl66ldns42n9DrFkUsDreABP_I09qMkz9Nk36xmIZQ</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>19220364</pqid></control><display><type>article</type><title>A novel HLA-A allele: A0257</title><source>Wiley</source><creator>García-Ortiz, J.E. ; Cox, S.T. ; Sandoval-Ramirez, L. ; Little, A.M. ; Marsh, S.G.E. ; Madrigal, J.A. ; Argüello, J.R.</creator><creatorcontrib>García-Ortiz, J.E. ; Cox, S.T. ; Sandoval-Ramirez, L. ; Little, A.M. ; Marsh, S.G.E. ; Madrigal, J.A. ; Argüello, J.R.</creatorcontrib><description>:  A novel human leucocyte antigen‐A*02 (HLA‐A*02) allele was detected by reference strand‐mediated conformation analysis (RSCA) of a DNA sample from a Tarahumara individual. Direct sequencing of HLA‐A locus polymerase chain reaction products identified a mutation in one of the alleles. Cloning and sequencing confirmed the presence of a new allele, A*0257 which differed from A*0206 by two nucleotides at positions 355 and 362, inducing changes in residues 95 and 97, respectively, within the peptide‐binding site. Those changes suggest that allele A*0257 may have resulted from an intralocus recombination event.</description><identifier>ISSN: 0001-2815</identifier><identifier>EISSN: 1399-0039</identifier><identifier>DOI: 10.1111/j.1399-0039.2004.00154.x</identifier><identifier>PMID: 14651529</identifier><language>eng</language><publisher>Oxford, UK: Munksgaard International Publishers</publisher><subject>Alleles ; Base Sequence ; HLA-A Antigens - genetics ; HLA-A Antigens - immunology ; HLA-A0257 ; Humans ; Molecular Sequence Data ; Mutation ; new HLA allele ; Polymerase Chain Reaction ; reference strand-mediated conformation analysis ; Sequence Analysis, DNA</subject><ispartof>Tissue antigens, 2004-01, Vol.63 (1), p.85-87</ispartof><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4334-52787259ae103111154d7789784569d44be819bb4bfe682d3fdbfa537f6d05e43</citedby><cites>FETCH-LOGICAL-c4334-52787259ae103111154d7789784569d44be819bb4bfe682d3fdbfa537f6d05e43</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/14651529$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>García-Ortiz, J.E.</creatorcontrib><creatorcontrib>Cox, S.T.</creatorcontrib><creatorcontrib>Sandoval-Ramirez, L.</creatorcontrib><creatorcontrib>Little, A.M.</creatorcontrib><creatorcontrib>Marsh, S.G.E.</creatorcontrib><creatorcontrib>Madrigal, J.A.</creatorcontrib><creatorcontrib>Argüello, J.R.</creatorcontrib><title>A novel HLA-A allele: A0257</title><title>Tissue antigens</title><addtitle>Tissue Antigens</addtitle><description>:  A novel human leucocyte antigen‐A*02 (HLA‐A*02) allele was detected by reference strand‐mediated conformation analysis (RSCA) of a DNA sample from a Tarahumara individual. Direct sequencing of HLA‐A locus polymerase chain reaction products identified a mutation in one of the alleles. Cloning and sequencing confirmed the presence of a new allele, A*0257 which differed from A*0206 by two nucleotides at positions 355 and 362, inducing changes in residues 95 and 97, respectively, within the peptide‐binding site. Those changes suggest that allele A*0257 may have resulted from an intralocus recombination event.</description><subject>Alleles</subject><subject>Base Sequence</subject><subject>HLA-A Antigens - genetics</subject><subject>HLA-A Antigens - immunology</subject><subject>HLA-A0257</subject><subject>Humans</subject><subject>Molecular Sequence Data</subject><subject>Mutation</subject><subject>new HLA allele</subject><subject>Polymerase Chain Reaction</subject><subject>reference strand-mediated conformation analysis</subject><subject>Sequence Analysis, DNA</subject><issn>0001-2815</issn><issn>1399-0039</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2004</creationdate><recordtype>article</recordtype><recordid>eNqNkF1PwjAUhhujEUR_gYnZlXeb_Vxb481CFDQEo8Ho3cnGumRYGK6g8O_tHMFL7U172uc9PXkQCgiOiF9Xs4gwrUOMmY4oxjzCmAgebQ5Qd_9wiLrYX4dUEdFBJ87NfMWl1seoQ3gsiKC6i86TYFF9GhsMR0mYBKm1xprrIMFUyFN0VKTWmbPd3kMvd7eT_jAcPQ7u-8konHLGeCioVJIKnRqCWTOe4LmUSkvFRaxzzjOjiM4ynhUmVjRnRZ4VqWCyiHMsDGc9dNn2XdbVx9q4FcxLNzXWpgtTrR1IIjSN5d8g0ZRiFjegasFpXTlXmwKWdTlP6y0QDM2IMINGFDSioDEIPwZh46MXuz_W2dzkv8GdMg_ctMBXac32341hkoz9wcfDNl66ldns42n9DrFkUsDreABP_I09qMkz9Nk36xmIZQ</recordid><startdate>200401</startdate><enddate>200401</enddate><creator>García-Ortiz, J.E.</creator><creator>Cox, S.T.</creator><creator>Sandoval-Ramirez, L.</creator><creator>Little, A.M.</creator><creator>Marsh, S.G.E.</creator><creator>Madrigal, J.A.</creator><creator>Argüello, J.R.</creator><general>Munksgaard International Publishers</general><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7T5</scope><scope>H94</scope><scope>7X8</scope></search><sort><creationdate>200401</creationdate><title>A novel HLA-A allele: A0257</title><author>García-Ortiz, J.E. ; Cox, S.T. ; Sandoval-Ramirez, L. ; Little, A.M. ; Marsh, S.G.E. ; Madrigal, J.A. ; Argüello, J.R.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4334-52787259ae103111154d7789784569d44be819bb4bfe682d3fdbfa537f6d05e43</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2004</creationdate><topic>Alleles</topic><topic>Base Sequence</topic><topic>HLA-A Antigens - genetics</topic><topic>HLA-A Antigens - immunology</topic><topic>HLA-A0257</topic><topic>Humans</topic><topic>Molecular Sequence Data</topic><topic>Mutation</topic><topic>new HLA allele</topic><topic>Polymerase Chain Reaction</topic><topic>reference strand-mediated conformation analysis</topic><topic>Sequence Analysis, DNA</topic><toplevel>online_resources</toplevel><creatorcontrib>García-Ortiz, J.E.</creatorcontrib><creatorcontrib>Cox, S.T.</creatorcontrib><creatorcontrib>Sandoval-Ramirez, L.</creatorcontrib><creatorcontrib>Little, A.M.</creatorcontrib><creatorcontrib>Marsh, S.G.E.</creatorcontrib><creatorcontrib>Madrigal, J.A.</creatorcontrib><creatorcontrib>Argüello, J.R.</creatorcontrib><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Immunology Abstracts</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Tissue antigens</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>García-Ortiz, J.E.</au><au>Cox, S.T.</au><au>Sandoval-Ramirez, L.</au><au>Little, A.M.</au><au>Marsh, S.G.E.</au><au>Madrigal, J.A.</au><au>Argüello, J.R.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A novel HLA-A allele: A0257</atitle><jtitle>Tissue antigens</jtitle><addtitle>Tissue Antigens</addtitle><date>2004-01</date><risdate>2004</risdate><volume>63</volume><issue>1</issue><spage>85</spage><epage>87</epage><pages>85-87</pages><issn>0001-2815</issn><eissn>1399-0039</eissn><abstract>:  A novel human leucocyte antigen‐A*02 (HLA‐A*02) allele was detected by reference strand‐mediated conformation analysis (RSCA) of a DNA sample from a Tarahumara individual. Direct sequencing of HLA‐A locus polymerase chain reaction products identified a mutation in one of the alleles. Cloning and sequencing confirmed the presence of a new allele, A*0257 which differed from A*0206 by two nucleotides at positions 355 and 362, inducing changes in residues 95 and 97, respectively, within the peptide‐binding site. Those changes suggest that allele A*0257 may have resulted from an intralocus recombination event.</abstract><cop>Oxford, UK</cop><pub>Munksgaard International Publishers</pub><pmid>14651529</pmid><doi>10.1111/j.1399-0039.2004.00154.x</doi><tpages>3</tpages></addata></record>
fulltext fulltext
identifier ISSN: 0001-2815
ispartof Tissue antigens, 2004-01, Vol.63 (1), p.85-87
issn 0001-2815
1399-0039
language eng
recordid cdi_proquest_miscellaneous_71592674
source Wiley
subjects Alleles
Base Sequence
HLA-A Antigens - genetics
HLA-A Antigens - immunology
HLA-A0257
Humans
Molecular Sequence Data
Mutation
new HLA allele
Polymerase Chain Reaction
reference strand-mediated conformation analysis
Sequence Analysis, DNA
title A novel HLA-A allele: A0257
url http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-07T13%3A50%3A44IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=A%20novel%20HLA-A%20allele:%20A0257&rft.jtitle=Tissue%20antigens&rft.au=Garc%C3%ADa-Ortiz,%20J.E.&rft.date=2004-01&rft.volume=63&rft.issue=1&rft.spage=85&rft.epage=87&rft.pages=85-87&rft.issn=0001-2815&rft.eissn=1399-0039&rft_id=info:doi/10.1111/j.1399-0039.2004.00154.x&rft_dat=%3Cproquest_cross%3E71592674%3C/proquest_cross%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-c4334-52787259ae103111154d7789784569d44be819bb4bfe682d3fdbfa537f6d05e43%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_pqid=19220364&rft_id=info:pmid/14651529&rfr_iscdi=true