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The Crystal Structures of the Ferric and Ferrous Forms of the Heme Complex of HmuO, a Heme Oxygenase of Corynebacterium diphtheriae
Crystal structures of the ferric and ferrous heme complexes of HmuO, a 24-kDa heme oxygenase of Corynebacterium diphtheriae, have been refined to 1.4 and 1.5 Å resolution, respectively. The HmuO structures show that the heme group is closely sandwiched between the proximal and distal helices. The im...
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Published in: | The Journal of biological chemistry 2004-03, Vol.279 (12), p.11937-11947 |
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container_title | The Journal of biological chemistry |
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creator | Hirotsu, Shoko Chu, Grace C. Unno, Masaki Lee, Dong-Sun Yoshida, Tadashi Park, Sam-Yong Shiro, Yoshitsugu Ikeda-Saito, Masao |
description | Crystal structures of the ferric and ferrous heme complexes of HmuO, a 24-kDa heme oxygenase of Corynebacterium diphtheriae, have been refined to 1.4 and 1.5 Å resolution, respectively. The HmuO structures show that the heme group is closely sandwiched between the proximal and distal helices. The imidazole group of His-20 is the proximal heme ligand, which closely eclipses the β- and δ-meso axis of the porphyrin ring. A long range hydrogen bonding network is present, connecting the iron-bound water ligand to the solvent water molecule. This enables proton transfer from the solvent to the catalytic site, where the oxygen activation occurs. In comparison to the ferric complex, the proximal and distal helices move closer to the heme plane in the ferrous complex. Together with the kinked distal helix, this movement leaves only the α-meso carbon atom accessible to the iron-bound dioxygen. The heme pocket architecture is responsible for stabilization of the ferric hydroperoxo-active intermediate by preventing premature heterolytic O-O bond cleavage. This allows the enzyme to oxygenate selectively at the α-meso carbon in HmuO catalysis. |
doi_str_mv | 10.1074/jbc.M311631200 |
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The HmuO structures show that the heme group is closely sandwiched between the proximal and distal helices. The imidazole group of His-20 is the proximal heme ligand, which closely eclipses the β- and δ-meso axis of the porphyrin ring. A long range hydrogen bonding network is present, connecting the iron-bound water ligand to the solvent water molecule. This enables proton transfer from the solvent to the catalytic site, where the oxygen activation occurs. In comparison to the ferric complex, the proximal and distal helices move closer to the heme plane in the ferrous complex. Together with the kinked distal helix, this movement leaves only the α-meso carbon atom accessible to the iron-bound dioxygen. The heme pocket architecture is responsible for stabilization of the ferric hydroperoxo-active intermediate by preventing premature heterolytic O-O bond cleavage. This allows the enzyme to oxygenate selectively at the α-meso carbon in HmuO catalysis.</description><identifier>ISSN: 0021-9258</identifier><identifier>EISSN: 1083-351X</identifier><identifier>DOI: 10.1074/jbc.M311631200</identifier><identifier>PMID: 14645223</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Bacterial Proteins ; Corynebacterium diphtheriae ; Corynebacterium diphtheriae - enzymology ; Crystallography, X-Ray ; Ferric Compounds - chemistry ; Ferrous Compounds - chemistry ; Heme - chemistry ; Heme Oxygenase (Decyclizing) - chemistry ; Hydrogen Bonding ; Recombinant Proteins - chemistry</subject><ispartof>The Journal of biological chemistry, 2004-03, Vol.279 (12), p.11937-11947</ispartof><rights>2004 © 2004 ASBMB. 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The HmuO structures show that the heme group is closely sandwiched between the proximal and distal helices. The imidazole group of His-20 is the proximal heme ligand, which closely eclipses the β- and δ-meso axis of the porphyrin ring. A long range hydrogen bonding network is present, connecting the iron-bound water ligand to the solvent water molecule. This enables proton transfer from the solvent to the catalytic site, where the oxygen activation occurs. In comparison to the ferric complex, the proximal and distal helices move closer to the heme plane in the ferrous complex. Together with the kinked distal helix, this movement leaves only the α-meso carbon atom accessible to the iron-bound dioxygen. The heme pocket architecture is responsible for stabilization of the ferric hydroperoxo-active intermediate by preventing premature heterolytic O-O bond cleavage. This allows the enzyme to oxygenate selectively at the α-meso carbon in HmuO catalysis.</description><subject>Bacterial Proteins</subject><subject>Corynebacterium diphtheriae</subject><subject>Corynebacterium diphtheriae - enzymology</subject><subject>Crystallography, X-Ray</subject><subject>Ferric Compounds - chemistry</subject><subject>Ferrous Compounds - chemistry</subject><subject>Heme - chemistry</subject><subject>Heme Oxygenase (Decyclizing) - chemistry</subject><subject>Hydrogen Bonding</subject><subject>Recombinant Proteins - chemistry</subject><issn>0021-9258</issn><issn>1083-351X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2004</creationdate><recordtype>article</recordtype><recordid>eNqFkUFv1DAQhS0EotvClSPKAXFqFo8dx8kRrVgWqWgPFImb5diTxlWcLHYC3TN_HC9Z0RPCF1vzvnkazyPkFdA1UFm8u2_M-jMHKDkwSp-QFdCK51zAt6dkRSmDvGaiuiCXMd7TdIoanpMLKMpCMMZX5Ndth9kmHOOk--zLFGYzzQFjNrbZlJQthuBMpgf75znOMduOwf_Vd-hT--gPPT6cajs_768zvdT3D8c7HHTEk7IZw3HARpsJg5t9Zt2hSw7BaXxBnrW6j_jyfF-Rr9sPt5tdfrP_-Gnz_iY3gpZTDoWtNW9NybgE0BKYxba1tZWUI6cgKiEkrY0pZEttYZoSS63R1lAK1LziV-Tt4nsI4_cZ46S8iwb7Xg-YfqYkSCZ4Wsv_QKhoAVV1clwvoAljjAFbdQjO63BUQNUpH5XyUY_5pIbXZ-e58Wgf8XMgCXizAJ276366gKpxo-nQKyZrBUwB1FwmrFowTPv64TCoaBwOBm1qMZOyo_vXCL8BGUaqdQ</recordid><startdate>20040319</startdate><enddate>20040319</enddate><creator>Hirotsu, Shoko</creator><creator>Chu, Grace C.</creator><creator>Unno, Masaki</creator><creator>Lee, Dong-Sun</creator><creator>Yoshida, Tadashi</creator><creator>Park, Sam-Yong</creator><creator>Shiro, Yoshitsugu</creator><creator>Ikeda-Saito, Masao</creator><general>Elsevier Inc</general><general>American Society for Biochemistry and Molecular Biology</general><scope>6I.</scope><scope>AAFTH</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>C1K</scope><scope>7X8</scope></search><sort><creationdate>20040319</creationdate><title>The Crystal Structures of the Ferric and Ferrous Forms of the Heme Complex of HmuO, a Heme Oxygenase of Corynebacterium diphtheriae</title><author>Hirotsu, Shoko ; 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The HmuO structures show that the heme group is closely sandwiched between the proximal and distal helices. The imidazole group of His-20 is the proximal heme ligand, which closely eclipses the β- and δ-meso axis of the porphyrin ring. A long range hydrogen bonding network is present, connecting the iron-bound water ligand to the solvent water molecule. This enables proton transfer from the solvent to the catalytic site, where the oxygen activation occurs. In comparison to the ferric complex, the proximal and distal helices move closer to the heme plane in the ferrous complex. Together with the kinked distal helix, this movement leaves only the α-meso carbon atom accessible to the iron-bound dioxygen. The heme pocket architecture is responsible for stabilization of the ferric hydroperoxo-active intermediate by preventing premature heterolytic O-O bond cleavage. This allows the enzyme to oxygenate selectively at the α-meso carbon in HmuO catalysis.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>14645223</pmid><doi>10.1074/jbc.M311631200</doi><tpages>11</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Bacterial Proteins Corynebacterium diphtheriae Corynebacterium diphtheriae - enzymology Crystallography, X-Ray Ferric Compounds - chemistry Ferrous Compounds - chemistry Heme - chemistry Heme Oxygenase (Decyclizing) - chemistry Hydrogen Bonding Recombinant Proteins - chemistry |
title | The Crystal Structures of the Ferric and Ferrous Forms of the Heme Complex of HmuO, a Heme Oxygenase of Corynebacterium diphtheriae |
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