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Characterization of Peromyscus MHC class II beta sequences by ligation-anchored RT-PCR and denaturing gradient gel electrophoresis
Summary We characterized MHC class II beta sequences in deermice (genus Peromyscus), which are amongst the most common mammals in North America. We find evidence for two different families of class II beta loci, most closely related to either the A‐type or E‐type loci in Mus. Population studies sugg...
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| Published in: | European journal of immunogenetics 2002-06, Vol.29 (3), p.213-217 |
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| Main Authors: | , , |
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| Language: | English |
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| cited_by | cdi_FETCH-LOGICAL-c4330-2c410023562592a3fd542626a12800223b6c81ed2b2389a6ea265b645d7146263 |
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| cites | cdi_FETCH-LOGICAL-c4330-2c410023562592a3fd542626a12800223b6c81ed2b2389a6ea265b645d7146263 |
| container_end_page | 217 |
| container_issue | 3 |
| container_start_page | 213 |
| container_title | European journal of immunogenetics |
| container_volume | 29 |
| creator | Richman, A. D. Herrera, L. G. Nash, D. |
| description | Summary
We characterized MHC class II beta sequences in deermice (genus Peromyscus), which are amongst the most common mammals in North America. We find evidence for two different families of class II beta loci, most closely related to either the A‐type or E‐type loci in Mus. Population studies suggest the presence of more than one A‐type locus but only one E‐type locus for the species investigated. |
| doi_str_mv | 10.1046/j.1365-2370.2002.00290.x |
| format | article |
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We characterized MHC class II beta sequences in deermice (genus Peromyscus), which are amongst the most common mammals in North America. We find evidence for two different families of class II beta loci, most closely related to either the A‐type or E‐type loci in Mus. Population studies suggest the presence of more than one A‐type locus but only one E‐type locus for the species investigated.</description><identifier>ISSN: 0960-7420</identifier><identifier>EISSN: 1365-2370</identifier><identifier>DOI: 10.1046/j.1365-2370.2002.00290.x</identifier><identifier>PMID: 12047356</identifier><language>eng</language><publisher>Oxford, UK: Blackwell Science Ltd</publisher><subject>Amino Acid Sequence ; Animals ; Electrophoresis, Polyacrylamide Gel ; Genes, MHC Class II ; Genetic Variation ; Molecular Sequence Data ; Peromyscus - genetics ; Phylogeny ; Reverse Transcriptase Polymerase Chain Reaction ; Sequence Alignment</subject><ispartof>European journal of immunogenetics, 2002-06, Vol.29 (3), p.213-217</ispartof><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4330-2c410023562592a3fd542626a12800223b6c81ed2b2389a6ea265b645d7146263</citedby><cites>FETCH-LOGICAL-c4330-2c410023562592a3fd542626a12800223b6c81ed2b2389a6ea265b645d7146263</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/12047356$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Richman, A. D.</creatorcontrib><creatorcontrib>Herrera, L. G.</creatorcontrib><creatorcontrib>Nash, D.</creatorcontrib><title>Characterization of Peromyscus MHC class II beta sequences by ligation-anchored RT-PCR and denaturing gradient gel electrophoresis</title><title>European journal of immunogenetics</title><addtitle>Eur J Immunogenet</addtitle><description>Summary
We characterized MHC class II beta sequences in deermice (genus Peromyscus), which are amongst the most common mammals in North America. We find evidence for two different families of class II beta loci, most closely related to either the A‐type or E‐type loci in Mus. Population studies suggest the presence of more than one A‐type locus but only one E‐type locus for the species investigated.</description><subject>Amino Acid Sequence</subject><subject>Animals</subject><subject>Electrophoresis, Polyacrylamide Gel</subject><subject>Genes, MHC Class II</subject><subject>Genetic Variation</subject><subject>Molecular Sequence Data</subject><subject>Peromyscus - genetics</subject><subject>Phylogeny</subject><subject>Reverse Transcriptase Polymerase Chain Reaction</subject><subject>Sequence Alignment</subject><issn>0960-7420</issn><issn>1365-2370</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2002</creationdate><recordtype>article</recordtype><recordid>eNqNkU9v0zAYhy0EYmXwFZBP3BL8P4nEBUWsyza2MQ1xtBznbeeSJp2diJbjPvmctRrHcbBs2c_zvn71QwhTklIi1OdVSrmSCeMZSRkhLI2rIOn2FZo9P7xGM1IokmSCkSP0LoQVIZTTQr1FR5QRkXGpZuihvDPe2AG8-2sG13e4X-Br8P16F-wY8PfTEtvWhICrCtcwGBzgfoTOQsD1Drdu-WQlprN3vYcG39wm1-UNNl2DG-jMMHrXLfHSm8ZBN-AltBhasIPvN5MQXHiP3ixMG-DDYT9GP0--3ZanycXVvCq_XiRWcE4SZgWNY8ZfM1kwwxeNFEwxZSjL4z3jtbI5hYbVjOeFUWCYkrUSssmoiBw_Rp_2dTe-jyOEQa9dsNC2poN-DDqjWc4zmb8I0lxwpXIZwXwPWt-H4GGhN96tjd9pSvQUlF7pKQ895aGnoPRTUHob1Y-HHmO9huafeEgmAl_2wB_Xwu6_C-vqrIqHqCd73YUBts-68b-1yuKU-tflXJ_Icz6__EH1nD8CHM-vlw</recordid><startdate>200206</startdate><enddate>200206</enddate><creator>Richman, A. D.</creator><creator>Herrera, L. G.</creator><creator>Nash, D.</creator><general>Blackwell Science Ltd</general><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7T5</scope><scope>H94</scope><scope>7X8</scope></search><sort><creationdate>200206</creationdate><title>Characterization of Peromyscus MHC class II beta sequences by ligation-anchored RT-PCR and denaturing gradient gel electrophoresis</title><author>Richman, A. D. ; Herrera, L. G. ; Nash, D.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4330-2c410023562592a3fd542626a12800223b6c81ed2b2389a6ea265b645d7146263</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2002</creationdate><topic>Amino Acid Sequence</topic><topic>Animals</topic><topic>Electrophoresis, Polyacrylamide Gel</topic><topic>Genes, MHC Class II</topic><topic>Genetic Variation</topic><topic>Molecular Sequence Data</topic><topic>Peromyscus - genetics</topic><topic>Phylogeny</topic><topic>Reverse Transcriptase Polymerase Chain Reaction</topic><topic>Sequence Alignment</topic><toplevel>online_resources</toplevel><creatorcontrib>Richman, A. D.</creatorcontrib><creatorcontrib>Herrera, L. G.</creatorcontrib><creatorcontrib>Nash, D.</creatorcontrib><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Immunology Abstracts</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>European journal of immunogenetics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Richman, A. D.</au><au>Herrera, L. G.</au><au>Nash, D.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Characterization of Peromyscus MHC class II beta sequences by ligation-anchored RT-PCR and denaturing gradient gel electrophoresis</atitle><jtitle>European journal of immunogenetics</jtitle><addtitle>Eur J Immunogenet</addtitle><date>2002-06</date><risdate>2002</risdate><volume>29</volume><issue>3</issue><spage>213</spage><epage>217</epage><pages>213-217</pages><issn>0960-7420</issn><eissn>1365-2370</eissn><abstract>Summary
We characterized MHC class II beta sequences in deermice (genus Peromyscus), which are amongst the most common mammals in North America. We find evidence for two different families of class II beta loci, most closely related to either the A‐type or E‐type loci in Mus. Population studies suggest the presence of more than one A‐type locus but only one E‐type locus for the species investigated.</abstract><cop>Oxford, UK</cop><pub>Blackwell Science Ltd</pub><pmid>12047356</pmid><doi>10.1046/j.1365-2370.2002.00290.x</doi><tpages>5</tpages></addata></record> |
| fulltext | fulltext |
| identifier | ISSN: 0960-7420 |
| ispartof | European journal of immunogenetics, 2002-06, Vol.29 (3), p.213-217 |
| issn | 0960-7420 1365-2370 |
| language | eng |
| recordid | cdi_proquest_miscellaneous_71783758 |
| source | Wiley |
| subjects | Amino Acid Sequence Animals Electrophoresis, Polyacrylamide Gel Genes, MHC Class II Genetic Variation Molecular Sequence Data Peromyscus - genetics Phylogeny Reverse Transcriptase Polymerase Chain Reaction Sequence Alignment |
| title | Characterization of Peromyscus MHC class II beta sequences by ligation-anchored RT-PCR and denaturing gradient gel electrophoresis |
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