Loading…

Overexpression and characterization of dimeric and tetrameric forms of recombinant serine hydroxymethyltransferase from Bacillus stearothermophilus

Serine hydroxymethyltransferase (SHMT), a pyridoxal-5' -phosphate (PLP) dependent enzyme catalyzes the interconversion of L-Ser and Gly using tetrahydrofolate as a substrate. The gene encoding for SHMT was amplified by PCR from genomic DNA of Bacillus stearothermophilus and the PCR product was...

Full description

Saved in:
Bibliographic Details
Published in:Journal of biosciences 2002-06, Vol.27 (3), p.233-242
Main Authors: Jala, Venkatakrishna R, Prakash, V, Rao, N Appaji, Savithri, H S
Format: Article
Language:English
Subjects:
Online Access:Get full text
Tags: Add Tag
No Tags, Be the first to tag this record!
cited_by
cites
container_end_page 242
container_issue 3
container_start_page 233
container_title Journal of biosciences
container_volume 27
creator Jala, Venkatakrishna R
Prakash, V
Rao, N Appaji
Savithri, H S
description Serine hydroxymethyltransferase (SHMT), a pyridoxal-5' -phosphate (PLP) dependent enzyme catalyzes the interconversion of L-Ser and Gly using tetrahydrofolate as a substrate. The gene encoding for SHMT was amplified by PCR from genomic DNA of Bacillus stearothermophilus and the PCR product was cloned and overexpressed in Escherichia coli. The purified recombinant enzyme was isolated as a mixture of dimer (90%) and tetramer (10%). This is the first report demonstrating the existence of SHMT as a dimer and tetramer in the same organism. The specific activities at 37 C of the dimeric and tetrameric forms were 6 7 U/mg and 4 1 U/mg, respectively. The purified dimer was extremely thermostable with a T(m) of 85 degrees C in the presence of PLP and L-Ser. The temperature optimum of the dimer was 80 degrees C with a specific activity of 32 4 U/mg at this temperature. The enzyme catalyzed tetrahydrofolate-independent reactions at a slower rate compared to the tetrahydrofolate-dependent retro-aldol cleavage of L-Ser. The interaction with substrates and their analogues indicated that the orientation of PLP ring of B. stearothermophilus SHMT was probably different from sheep liver cytosolic recombinant SHMT (scSHMT).
doi_str_mv 10.1007/BF02704912
format article
fullrecord <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_proquest_miscellaneous_71876853</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>71876853</sourcerecordid><originalsourceid>FETCH-LOGICAL-p234t-df58f54843e44dd6f3ec6a1d4c538779fdd221e49a88e3e909b127a4d2705403</originalsourceid><addsrcrecordid>eNpdkLtOxDAQRS0EguXR8AEooqAL-JXYLlnES0KioY-88VgJiuNgO2iX3-CHMSw0VDNz75nR6CJ0SvAlwVhcLe8wFZgrQnfQAivBSkGY3M09rXBZKUUO0GGMrxgTxRneRweEYqm4oAv0-fwOAdZTgBh7PxZ6NEXb6aDbBKH_0Olb9LYwvctz--MnSEFvR-uDi99-gNa7VT_qMRUxWyMU3cYEv944SN1myBtjtBB0hMIG74qlbvthmGMRE-jgUwfB-anrs3SM9qweIpz81iP0cnf7cvNQPj3fP95cP5UTZTyVxlbSVlxyBpwbU1sGba2J4W3FpBDKGkMpAa60lMBAYbUiVGhuclgVx-wIXWzPTsG_zRBT4_rYwjDoEfwcG0GkqGXFMnj-D3z1cxjzaw1lNRG0xjJDZ7_QvHJgmin0TodN8xc1-wIAp4P0</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>236172608</pqid></control><display><type>article</type><title>Overexpression and characterization of dimeric and tetrameric forms of recombinant serine hydroxymethyltransferase from Bacillus stearothermophilus</title><source>Springer Link</source><creator>Jala, Venkatakrishna R ; Prakash, V ; Rao, N Appaji ; Savithri, H S</creator><creatorcontrib>Jala, Venkatakrishna R ; Prakash, V ; Rao, N Appaji ; Savithri, H S</creatorcontrib><description>Serine hydroxymethyltransferase (SHMT), a pyridoxal-5' -phosphate (PLP) dependent enzyme catalyzes the interconversion of L-Ser and Gly using tetrahydrofolate as a substrate. The gene encoding for SHMT was amplified by PCR from genomic DNA of Bacillus stearothermophilus and the PCR product was cloned and overexpressed in Escherichia coli. The purified recombinant enzyme was isolated as a mixture of dimer (90%) and tetramer (10%). This is the first report demonstrating the existence of SHMT as a dimer and tetramer in the same organism. The specific activities at 37 C of the dimeric and tetrameric forms were 6 7 U/mg and 4 1 U/mg, respectively. The purified dimer was extremely thermostable with a T(m) of 85 degrees C in the presence of PLP and L-Ser. The temperature optimum of the dimer was 80 degrees C with a specific activity of 32 4 U/mg at this temperature. The enzyme catalyzed tetrahydrofolate-independent reactions at a slower rate compared to the tetrahydrofolate-dependent retro-aldol cleavage of L-Ser. The interaction with substrates and their analogues indicated that the orientation of PLP ring of B. stearothermophilus SHMT was probably different from sheep liver cytosolic recombinant SHMT (scSHMT).</description><identifier>ISSN: 0250-5991</identifier><identifier>EISSN: 0973-7138</identifier><identifier>DOI: 10.1007/BF02704912</identifier><identifier>PMID: 12089472</identifier><language>eng</language><publisher>India: Springer Nature B.V</publisher><subject>Bacteria ; Calorimetry, Differential Scanning ; Catalysis ; Chromatography, Gel ; Cloning, Molecular ; E coli ; Enzyme Stability ; Enzymes ; Gene Expression ; Genes ; Geobacillus stearothermophilus - enzymology ; Glycine Hydroxymethyltransferase - biosynthesis ; Glycine Hydroxymethyltransferase - chemistry ; Glycine Hydroxymethyltransferase - genetics ; Glycine Hydroxymethyltransferase - isolation &amp; purification ; Kinetics ; Ligands ; Molecular biology ; Polymerase Chain Reaction ; Protein Structure, Quaternary ; Studies ; Temperature</subject><ispartof>Journal of biosciences, 2002-06, Vol.27 (3), p.233-242</ispartof><rights>Indian Academy of Sciences 2002</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/12089472$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Jala, Venkatakrishna R</creatorcontrib><creatorcontrib>Prakash, V</creatorcontrib><creatorcontrib>Rao, N Appaji</creatorcontrib><creatorcontrib>Savithri, H S</creatorcontrib><title>Overexpression and characterization of dimeric and tetrameric forms of recombinant serine hydroxymethyltransferase from Bacillus stearothermophilus</title><title>Journal of biosciences</title><addtitle>J Biosci</addtitle><description>Serine hydroxymethyltransferase (SHMT), a pyridoxal-5' -phosphate (PLP) dependent enzyme catalyzes the interconversion of L-Ser and Gly using tetrahydrofolate as a substrate. The gene encoding for SHMT was amplified by PCR from genomic DNA of Bacillus stearothermophilus and the PCR product was cloned and overexpressed in Escherichia coli. The purified recombinant enzyme was isolated as a mixture of dimer (90%) and tetramer (10%). This is the first report demonstrating the existence of SHMT as a dimer and tetramer in the same organism. The specific activities at 37 C of the dimeric and tetrameric forms were 6 7 U/mg and 4 1 U/mg, respectively. The purified dimer was extremely thermostable with a T(m) of 85 degrees C in the presence of PLP and L-Ser. The temperature optimum of the dimer was 80 degrees C with a specific activity of 32 4 U/mg at this temperature. The enzyme catalyzed tetrahydrofolate-independent reactions at a slower rate compared to the tetrahydrofolate-dependent retro-aldol cleavage of L-Ser. The interaction with substrates and their analogues indicated that the orientation of PLP ring of B. stearothermophilus SHMT was probably different from sheep liver cytosolic recombinant SHMT (scSHMT).</description><subject>Bacteria</subject><subject>Calorimetry, Differential Scanning</subject><subject>Catalysis</subject><subject>Chromatography, Gel</subject><subject>Cloning, Molecular</subject><subject>E coli</subject><subject>Enzyme Stability</subject><subject>Enzymes</subject><subject>Gene Expression</subject><subject>Genes</subject><subject>Geobacillus stearothermophilus - enzymology</subject><subject>Glycine Hydroxymethyltransferase - biosynthesis</subject><subject>Glycine Hydroxymethyltransferase - chemistry</subject><subject>Glycine Hydroxymethyltransferase - genetics</subject><subject>Glycine Hydroxymethyltransferase - isolation &amp; purification</subject><subject>Kinetics</subject><subject>Ligands</subject><subject>Molecular biology</subject><subject>Polymerase Chain Reaction</subject><subject>Protein Structure, Quaternary</subject><subject>Studies</subject><subject>Temperature</subject><issn>0250-5991</issn><issn>0973-7138</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2002</creationdate><recordtype>article</recordtype><recordid>eNpdkLtOxDAQRS0EguXR8AEooqAL-JXYLlnES0KioY-88VgJiuNgO2iX3-CHMSw0VDNz75nR6CJ0SvAlwVhcLe8wFZgrQnfQAivBSkGY3M09rXBZKUUO0GGMrxgTxRneRweEYqm4oAv0-fwOAdZTgBh7PxZ6NEXb6aDbBKH_0Olb9LYwvctz--MnSEFvR-uDi99-gNa7VT_qMRUxWyMU3cYEv944SN1myBtjtBB0hMIG74qlbvthmGMRE-jgUwfB-anrs3SM9qweIpz81iP0cnf7cvNQPj3fP95cP5UTZTyVxlbSVlxyBpwbU1sGba2J4W3FpBDKGkMpAa60lMBAYbUiVGhuclgVx-wIXWzPTsG_zRBT4_rYwjDoEfwcG0GkqGXFMnj-D3z1cxjzaw1lNRG0xjJDZ7_QvHJgmin0TodN8xc1-wIAp4P0</recordid><startdate>20020601</startdate><enddate>20020601</enddate><creator>Jala, Venkatakrishna R</creator><creator>Prakash, V</creator><creator>Rao, N Appaji</creator><creator>Savithri, H S</creator><general>Springer Nature B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>3V.</scope><scope>7QL</scope><scope>7TM</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>F1W</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>H99</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>L.F</scope><scope>L.G</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2O</scope><scope>M7P</scope><scope>MBDVC</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><scope>7X8</scope></search><sort><creationdate>20020601</creationdate><title>Overexpression and characterization of dimeric and tetrameric forms of recombinant serine hydroxymethyltransferase from Bacillus stearothermophilus</title><author>Jala, Venkatakrishna R ; Prakash, V ; Rao, N Appaji ; Savithri, H S</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-p234t-df58f54843e44dd6f3ec6a1d4c538779fdd221e49a88e3e909b127a4d2705403</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2002</creationdate><topic>Bacteria</topic><topic>Calorimetry, Differential Scanning</topic><topic>Catalysis</topic><topic>Chromatography, Gel</topic><topic>Cloning, Molecular</topic><topic>E coli</topic><topic>Enzyme Stability</topic><topic>Enzymes</topic><topic>Gene Expression</topic><topic>Genes</topic><topic>Geobacillus stearothermophilus - enzymology</topic><topic>Glycine Hydroxymethyltransferase - biosynthesis</topic><topic>Glycine Hydroxymethyltransferase - chemistry</topic><topic>Glycine Hydroxymethyltransferase - genetics</topic><topic>Glycine Hydroxymethyltransferase - isolation &amp; purification</topic><topic>Kinetics</topic><topic>Ligands</topic><topic>Molecular biology</topic><topic>Polymerase Chain Reaction</topic><topic>Protein Structure, Quaternary</topic><topic>Studies</topic><topic>Temperature</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Jala, Venkatakrishna R</creatorcontrib><creatorcontrib>Prakash, V</creatorcontrib><creatorcontrib>Rao, N Appaji</creatorcontrib><creatorcontrib>Savithri, H S</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Nucleic Acids Abstracts</collection><collection>Health &amp; Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>ASFA: Marine Biotechnology Abstracts</collection><collection>SciTech Premium Collection (Proquest) (PQ_SDU_P3)</collection><collection>ProQuest Health &amp; Medical Complete (Alumni)</collection><collection>Aquatic Science &amp; Fisheries Abstracts (ASFA) Marine Biotechnology Abstracts</collection><collection>Aquatic Science &amp; Fisheries Abstracts (ASFA) Professional</collection><collection>ProQuest Biological Science Collection</collection><collection>Health &amp; Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Research Library</collection><collection>Biological Science Database</collection><collection>Research Library (Corporate)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central Basic</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of biosciences</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Jala, Venkatakrishna R</au><au>Prakash, V</au><au>Rao, N Appaji</au><au>Savithri, H S</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Overexpression and characterization of dimeric and tetrameric forms of recombinant serine hydroxymethyltransferase from Bacillus stearothermophilus</atitle><jtitle>Journal of biosciences</jtitle><addtitle>J Biosci</addtitle><date>2002-06-01</date><risdate>2002</risdate><volume>27</volume><issue>3</issue><spage>233</spage><epage>242</epage><pages>233-242</pages><issn>0250-5991</issn><eissn>0973-7138</eissn><abstract>Serine hydroxymethyltransferase (SHMT), a pyridoxal-5' -phosphate (PLP) dependent enzyme catalyzes the interconversion of L-Ser and Gly using tetrahydrofolate as a substrate. The gene encoding for SHMT was amplified by PCR from genomic DNA of Bacillus stearothermophilus and the PCR product was cloned and overexpressed in Escherichia coli. The purified recombinant enzyme was isolated as a mixture of dimer (90%) and tetramer (10%). This is the first report demonstrating the existence of SHMT as a dimer and tetramer in the same organism. The specific activities at 37 C of the dimeric and tetrameric forms were 6 7 U/mg and 4 1 U/mg, respectively. The purified dimer was extremely thermostable with a T(m) of 85 degrees C in the presence of PLP and L-Ser. The temperature optimum of the dimer was 80 degrees C with a specific activity of 32 4 U/mg at this temperature. The enzyme catalyzed tetrahydrofolate-independent reactions at a slower rate compared to the tetrahydrofolate-dependent retro-aldol cleavage of L-Ser. The interaction with substrates and their analogues indicated that the orientation of PLP ring of B. stearothermophilus SHMT was probably different from sheep liver cytosolic recombinant SHMT (scSHMT).</abstract><cop>India</cop><pub>Springer Nature B.V</pub><pmid>12089472</pmid><doi>10.1007/BF02704912</doi><tpages>10</tpages></addata></record>
fulltext fulltext
identifier ISSN: 0250-5991
ispartof Journal of biosciences, 2002-06, Vol.27 (3), p.233-242
issn 0250-5991
0973-7138
language eng
recordid cdi_proquest_miscellaneous_71876853
source Springer Link
subjects Bacteria
Calorimetry, Differential Scanning
Catalysis
Chromatography, Gel
Cloning, Molecular
E coli
Enzyme Stability
Enzymes
Gene Expression
Genes
Geobacillus stearothermophilus - enzymology
Glycine Hydroxymethyltransferase - biosynthesis
Glycine Hydroxymethyltransferase - chemistry
Glycine Hydroxymethyltransferase - genetics
Glycine Hydroxymethyltransferase - isolation & purification
Kinetics
Ligands
Molecular biology
Polymerase Chain Reaction
Protein Structure, Quaternary
Studies
Temperature
title Overexpression and characterization of dimeric and tetrameric forms of recombinant serine hydroxymethyltransferase from Bacillus stearothermophilus
url http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-04T16%3A25%3A19IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Overexpression%20and%20characterization%20of%20dimeric%20and%20tetrameric%20forms%20of%20recombinant%20serine%20hydroxymethyltransferase%20from%20Bacillus%20stearothermophilus&rft.jtitle=Journal%20of%20biosciences&rft.au=Jala,%20Venkatakrishna%20R&rft.date=2002-06-01&rft.volume=27&rft.issue=3&rft.spage=233&rft.epage=242&rft.pages=233-242&rft.issn=0250-5991&rft.eissn=0973-7138&rft_id=info:doi/10.1007/BF02704912&rft_dat=%3Cproquest_pubme%3E71876853%3C/proquest_pubme%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-p234t-df58f54843e44dd6f3ec6a1d4c538779fdd221e49a88e3e909b127a4d2705403%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_pqid=236172608&rft_id=info:pmid/12089472&rfr_iscdi=true