Loading…

Pattern recognition and massively distributed computing

A feature of Peter Kollman's research was his exploitation of the latest computational techniques to devise novel applications of the free energy perturbation method. He would certainly have seized upon the opportunities offered by massively distributed computing. Here we describe the use of ov...

Full description

Saved in:
Bibliographic Details
Published in:Journal of computational chemistry 2002-12, Vol.23 (16), p.1544-1550
Main Authors: Davies, E. Keith, Glick, Meir, Harrison, Karl N., Richards, W. Graham
Format: Article
Language:English
Subjects:
Citations: Items that this one cites
Items that cite this one
Online Access:Get full text
Tags: Add Tag
No Tags, Be the first to tag this record!
cited_by cdi_FETCH-LOGICAL-c3597-ea5b03dec089f054fe6b827115e665d89a7ea22ce854e6d5c109044c295dcc83
cites cdi_FETCH-LOGICAL-c3597-ea5b03dec089f054fe6b827115e665d89a7ea22ce854e6d5c109044c295dcc83
container_end_page 1550
container_issue 16
container_start_page 1544
container_title Journal of computational chemistry
container_volume 23
creator Davies, E. Keith
Glick, Meir
Harrison, Karl N.
Richards, W. Graham
description A feature of Peter Kollman's research was his exploitation of the latest computational techniques to devise novel applications of the free energy perturbation method. He would certainly have seized upon the opportunities offered by massively distributed computing. Here we describe the use of over a million personal computers to perform virtual screening of 3.5 billion druglike molecules against protein targets by pharmacophore pattern matching, together with other applications of pattern recognition such as docking ligands without any a priori knowledge about the binding site location. © 2002 Wiley Periodicals, Inc. J Comput Chem 23: 1544–1550, 2002
doi_str_mv 10.1002/jcc.10107
format article
fullrecord <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_72516936</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>72516936</sourcerecordid><originalsourceid>FETCH-LOGICAL-c3597-ea5b03dec089f054fe6b827115e665d89a7ea22ce854e6d5c109044c295dcc83</originalsourceid><addsrcrecordid>eNp1kLlOxDAQQC0EguUo-AGUCoki4CO24xIFdgEhDmkl6CzHmSBDjsVOgP17Almgopop3jyNHkL7BB8TjOnJs7XDQrBcQxOClYhVKh_X0QQTReNUcLKFtkN4xhgzLpJNtEUoUzyhbILknek68E3kwbZPjetc20SmKaLahODeoFpGhQudd3nfQRHZtl70nWuedtFGaaoAe6u5g-bT83l2EV_fzi6z0-vYMq5kDIbnmBVgcapKzJMSRJ5SSQgHIXiRKiPBUGoh5QmIgtvhfZwklipeWJuyHXQ4ahe-fe0hdLp2wUJVmQbaPmhJORGKiQE8GkHr2xA8lHrhXW38UhOsvyLpIZL-jjSwBytpn9dQ_JGrKgNwMgLvroLl_yZ9lWU_yni8GFrBx--F8S9aSCa5friZ6ekFvp9nd2easU9Ean-6</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>72516936</pqid></control><display><type>article</type><title>Pattern recognition and massively distributed computing</title><source>Wiley-Blackwell Read &amp; Publish Collection</source><creator>Davies, E. Keith ; Glick, Meir ; Harrison, Karl N. ; Richards, W. Graham</creator><creatorcontrib>Davies, E. Keith ; Glick, Meir ; Harrison, Karl N. ; Richards, W. Graham</creatorcontrib><description>A feature of Peter Kollman's research was his exploitation of the latest computational techniques to devise novel applications of the free energy perturbation method. He would certainly have seized upon the opportunities offered by massively distributed computing. Here we describe the use of over a million personal computers to perform virtual screening of 3.5 billion druglike molecules against protein targets by pharmacophore pattern matching, together with other applications of pattern recognition such as docking ligands without any a priori knowledge about the binding site location. © 2002 Wiley Periodicals, Inc. J Comput Chem 23: 1544–1550, 2002</description><identifier>ISSN: 0192-8651</identifier><identifier>EISSN: 1096-987X</identifier><identifier>DOI: 10.1002/jcc.10107</identifier><identifier>PMID: 12395423</identifier><language>eng</language><publisher>New York: Wiley Subscription Services, Inc., A Wiley Company</publisher><subject>Algorithms ; anthrax ; anti-cancer ; Artificial Intelligence ; Benzamidines - chemistry ; Chemical Phenomena ; Chemistry, Physical ; Computational Biology ; Computer Communication Networks ; distributed computing ; inhibitors ; Models, Molecular ; Pattern Recognition, Automated ; protein binding sites ; Protein Conformation ; screensavers ; Serine Proteinase Inhibitors - chemistry</subject><ispartof>Journal of computational chemistry, 2002-12, Vol.23 (16), p.1544-1550</ispartof><rights>Copyright © 2002 Wiley Periodicals, Inc.</rights><rights>Copyright 2002 Wiley Periodicals, Inc.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c3597-ea5b03dec089f054fe6b827115e665d89a7ea22ce854e6d5c109044c295dcc83</citedby><cites>FETCH-LOGICAL-c3597-ea5b03dec089f054fe6b827115e665d89a7ea22ce854e6d5c109044c295dcc83</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,777,781,27905,27906</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/12395423$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Davies, E. Keith</creatorcontrib><creatorcontrib>Glick, Meir</creatorcontrib><creatorcontrib>Harrison, Karl N.</creatorcontrib><creatorcontrib>Richards, W. Graham</creatorcontrib><title>Pattern recognition and massively distributed computing</title><title>Journal of computational chemistry</title><addtitle>J. Comput. Chem</addtitle><description>A feature of Peter Kollman's research was his exploitation of the latest computational techniques to devise novel applications of the free energy perturbation method. He would certainly have seized upon the opportunities offered by massively distributed computing. Here we describe the use of over a million personal computers to perform virtual screening of 3.5 billion druglike molecules against protein targets by pharmacophore pattern matching, together with other applications of pattern recognition such as docking ligands without any a priori knowledge about the binding site location. © 2002 Wiley Periodicals, Inc. J Comput Chem 23: 1544–1550, 2002</description><subject>Algorithms</subject><subject>anthrax</subject><subject>anti-cancer</subject><subject>Artificial Intelligence</subject><subject>Benzamidines - chemistry</subject><subject>Chemical Phenomena</subject><subject>Chemistry, Physical</subject><subject>Computational Biology</subject><subject>Computer Communication Networks</subject><subject>distributed computing</subject><subject>inhibitors</subject><subject>Models, Molecular</subject><subject>Pattern Recognition, Automated</subject><subject>protein binding sites</subject><subject>Protein Conformation</subject><subject>screensavers</subject><subject>Serine Proteinase Inhibitors - chemistry</subject><issn>0192-8651</issn><issn>1096-987X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2002</creationdate><recordtype>article</recordtype><recordid>eNp1kLlOxDAQQC0EguUo-AGUCoki4CO24xIFdgEhDmkl6CzHmSBDjsVOgP17Almgopop3jyNHkL7BB8TjOnJs7XDQrBcQxOClYhVKh_X0QQTReNUcLKFtkN4xhgzLpJNtEUoUzyhbILknek68E3kwbZPjetc20SmKaLahODeoFpGhQudd3nfQRHZtl70nWuedtFGaaoAe6u5g-bT83l2EV_fzi6z0-vYMq5kDIbnmBVgcapKzJMSRJ5SSQgHIXiRKiPBUGoh5QmIgtvhfZwklipeWJuyHXQ4ahe-fe0hdLp2wUJVmQbaPmhJORGKiQE8GkHr2xA8lHrhXW38UhOsvyLpIZL-jjSwBytpn9dQ_JGrKgNwMgLvroLl_yZ9lWU_yni8GFrBx--F8S9aSCa5friZ6ekFvp9nd2easU9Ean-6</recordid><startdate>200212</startdate><enddate>200212</enddate><creator>Davies, E. Keith</creator><creator>Glick, Meir</creator><creator>Harrison, Karl N.</creator><creator>Richards, W. Graham</creator><general>Wiley Subscription Services, Inc., A Wiley Company</general><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>200212</creationdate><title>Pattern recognition and massively distributed computing</title><author>Davies, E. Keith ; Glick, Meir ; Harrison, Karl N. ; Richards, W. Graham</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c3597-ea5b03dec089f054fe6b827115e665d89a7ea22ce854e6d5c109044c295dcc83</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2002</creationdate><topic>Algorithms</topic><topic>anthrax</topic><topic>anti-cancer</topic><topic>Artificial Intelligence</topic><topic>Benzamidines - chemistry</topic><topic>Chemical Phenomena</topic><topic>Chemistry, Physical</topic><topic>Computational Biology</topic><topic>Computer Communication Networks</topic><topic>distributed computing</topic><topic>inhibitors</topic><topic>Models, Molecular</topic><topic>Pattern Recognition, Automated</topic><topic>protein binding sites</topic><topic>Protein Conformation</topic><topic>screensavers</topic><topic>Serine Proteinase Inhibitors - chemistry</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Davies, E. Keith</creatorcontrib><creatorcontrib>Glick, Meir</creatorcontrib><creatorcontrib>Harrison, Karl N.</creatorcontrib><creatorcontrib>Richards, W. Graham</creatorcontrib><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of computational chemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Davies, E. Keith</au><au>Glick, Meir</au><au>Harrison, Karl N.</au><au>Richards, W. Graham</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Pattern recognition and massively distributed computing</atitle><jtitle>Journal of computational chemistry</jtitle><addtitle>J. Comput. Chem</addtitle><date>2002-12</date><risdate>2002</risdate><volume>23</volume><issue>16</issue><spage>1544</spage><epage>1550</epage><pages>1544-1550</pages><issn>0192-8651</issn><eissn>1096-987X</eissn><abstract>A feature of Peter Kollman's research was his exploitation of the latest computational techniques to devise novel applications of the free energy perturbation method. He would certainly have seized upon the opportunities offered by massively distributed computing. Here we describe the use of over a million personal computers to perform virtual screening of 3.5 billion druglike molecules against protein targets by pharmacophore pattern matching, together with other applications of pattern recognition such as docking ligands without any a priori knowledge about the binding site location. © 2002 Wiley Periodicals, Inc. J Comput Chem 23: 1544–1550, 2002</abstract><cop>New York</cop><pub>Wiley Subscription Services, Inc., A Wiley Company</pub><pmid>12395423</pmid><doi>10.1002/jcc.10107</doi><tpages>7</tpages></addata></record>
fulltext fulltext
identifier ISSN: 0192-8651
ispartof Journal of computational chemistry, 2002-12, Vol.23 (16), p.1544-1550
issn 0192-8651
1096-987X
language eng
recordid cdi_proquest_miscellaneous_72516936
source Wiley-Blackwell Read & Publish Collection
subjects Algorithms
anthrax
anti-cancer
Artificial Intelligence
Benzamidines - chemistry
Chemical Phenomena
Chemistry, Physical
Computational Biology
Computer Communication Networks
distributed computing
inhibitors
Models, Molecular
Pattern Recognition, Automated
protein binding sites
Protein Conformation
screensavers
Serine Proteinase Inhibitors - chemistry
title Pattern recognition and massively distributed computing
url http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-19T19%3A35%3A00IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Pattern%20recognition%20and%20massively%20distributed%20computing&rft.jtitle=Journal%20of%20computational%20chemistry&rft.au=Davies,%20E.%20Keith&rft.date=2002-12&rft.volume=23&rft.issue=16&rft.spage=1544&rft.epage=1550&rft.pages=1544-1550&rft.issn=0192-8651&rft.eissn=1096-987X&rft_id=info:doi/10.1002/jcc.10107&rft_dat=%3Cproquest_cross%3E72516936%3C/proquest_cross%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-c3597-ea5b03dec089f054fe6b827115e665d89a7ea22ce854e6d5c109044c295dcc83%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_pqid=72516936&rft_id=info:pmid/12395423&rfr_iscdi=true